KEGG   Sciurus carolinensis (gray squirrel): 124982391
Entry
124982391         CDS       T08117                                 
Name
(RefSeq) tubulin alpha-8 chain
  KO
K07374  tubulin alpha
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04145  Phagosome
ncar04210  Apoptosis
ncar04517  IgSF CAM signaling
ncar04530  Tight junction
ncar04540  Gap junction
ncar04814  Motor proteins
ncar05010  Alzheimer disease
ncar05012  Parkinson disease
ncar05014  Amyotrophic lateral sclerosis
ncar05016  Huntington disease
ncar05020  Prion disease
ncar05022  Pathways of neurodegeneration - multiple diseases
ncar05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    124982391
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    124982391
  09143 Cell growth and death
   04210 Apoptosis
    124982391
  09144 Cellular community - eukaryotes
   04530 Tight junction
    124982391
   04540 Gap junction
    124982391
  09142 Cell motility
   04814 Motor proteins
    124982391
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124982391
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    124982391
   05012 Parkinson disease
    124982391
   05014 Amyotrophic lateral sclerosis
    124982391
   05016 Huntington disease
    124982391
   05020 Prion disease
    124982391
   05022 Pathways of neurodegeneration - multiple diseases
    124982391
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncar03019]
    124982391
   03036 Chromosome and associated proteins [BR:ncar03036]
    124982391
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ncar04812]
    124982391
   04147 Exosome [BR:ncar04147]
    124982391
Messenger RNA biogenesis [BR:ncar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     124982391
Chromosome and associated proteins [BR:ncar03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     124982391
Cytoskeleton proteins [BR:ncar04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    124982391
Exosome [BR:ncar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124982391
  Exosomal proteins of other body fluids (saliva and urine)
   124982391
  Exosomal proteins of colorectal cancer cells
   124982391
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 124982391
NCBI-ProteinID: XP_047404909
LinkDB
Position
4:complement(63857786..63876158)
AA seq 449 aa
MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFGAQASKINDDDSFTTFFSETGNGK
HVPRAVMVDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD
RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS
QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGTDSFEEENEGEEF
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgggaatgcatatctgtccacgtgggtcaagctggagttcagattggcaatgcttgt
tgggaactcttctgcctggagcatggcatccaggcggatggcacctttggtgctcaggcc
agcaagatcaacgatgatgactcctttaccacgtttttcagcgagaccggcaatgggaaa
catgtgccccgggctgtcatggtggacttggaacctactgtagtagatgaggttcgggca
ggaacctaccgccagctcttccatccagagcagctgatcacaggaaaggaggatgcggct
aacaattatgcccggggtcactacacagtgggcaaggagagcatcgatttagtactggac
cgcatacggaagctgacagatgcgtgctctggcttgcagggcttcctgatcttccacagt
tttggtggaggcactggctctggcttcacttctctgctgatggaacgcctctctcttgat
tatggcaagaagtccaagctagagtttgctatctaccctgcaccccaggtctccactgca
gtagttgagccctacaattccatcctgacaacccacaccacactggaacactcagattgt
gctttcatggtagataatgaagccatctatgacatctgccgcaggaacctagacatcgag
cgccccacctataccaacctcaaccgcctcatcagccagattgtgtcctcaatcacagcc
tctctccgctttgatggggccctcaatgtggacctcactgagttccagaccaacctggtg
ccctatccccgaatccacttcccactagttacctatgcacccatcatctctgctgagaaa
gcctaccatgaacagctgtctgtggctgagataaccagctcctgctttgagcccaacagc
cagatggtgaagtgtgacccaaggcatggcaagtatatggcctgctgcatgctgtaccgg
ggagatgtggtgcccaaggatgtgaatgttgctattgctgccatcaagaccaagaggact
atccagtttgttgactggtgtcccacaggcttcaaggtaggcatcaattaccagccaccc
actgtggtaccaggaggggatctggccaaagtccagcgggctgtctgcatgctgagcaac
accacagcaattgcggaggcctgggcccgacttgaccataagtttgacctaatgtacgcc
aagcgggcctttgtgcattggtatgttggagaaggaatggaagaaggagaattctctgag
gccagggaggatctggctgccctggagaaggattatgaagaagtggggaccgattcattt
gaagaagaaaatgaaggggaggaattttaa

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