Sciurus carolinensis (gray squirrel): 124982419 Help Entry 124982419         CDS       T08117                                  Name (RefSeq) squalene synthase isoform X1   KO K00801   farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] Organism ncar  Sciurus carolinensis (gray squirrel) Pathway ncar00100   Steroid biosynthesis ncar01100   Metabolic pathways Module ncar_M00101   Cholesterol biosynthesis, FPP => cholesterol Brite KEGG Orthology (KO) [BR:ncar00001]  09100 Metabolism   09103 Lipid metabolism    00100 Steroid biosynthesis     124982419  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:ncar01006]     124982419 Enzymes [BR:ncar01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.21  squalene synthase      124982419 Prenyltransferases [BR:ncar01006]  Terpene biosynthesis   Squalene/phytoene synthase    124982419 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SQS_PSY Motif Other DBs NCBI-GeneID:  124982419 NCBI-ProteinID:  XP_047404974 LinkDB All DBs Position 4:complement(7540249..7571760) Genome browser AA seq 465 aa AA seqDB search MAAGACSTKAMSLFKRTLVLSPAAAPRGPGAGVPRGCPLPSAPWPSKDWSRLRSPAAGLL PQSHTHSCSSSPTAVCLLCPQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRHAVCIF YLVLRALDTLEDDMTISVEKKVPLLHNFHTFLYEPDWRFTESQEKDRQVLEDFPTISLEF RNLAKKYQTVIADICQRMGTGMAEFLDKHVTSEREWDKYCHYVAGLVGIGLSRLFSASEF EDPVVGEDVNLANSMGLFLQKTNIIRDYLEDQREGREFWPQEVWSRYVKKLGDFAKPENI DLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKG VVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPNSDPSSSKTRQIISTIRTQNLP NCQLISRSHYSPLYLSFVMLLAALSWQYLSTLTQVTEDYVQTGEH NT seq 1398 nt NT seq  +upstreamnt  +downstreamnt atggccgcaggcgcctgcagcaccaaggccatgtccctcttcaagcgcaccttggtgcta agccccgccgcggcgcccaggggccctggggcaggcgtcccgcggggctgccccttgcct tcagccccctggccttccaaagactggtctcggctacggagcccagcggccggcctcctt ccccagtcccacacccactcctgctcctcgtctccgaccgccgtgtgtcttctctgtccg caggactcgctcagcagcagcttgaaaacttgctacaaatatctgaaccagaccagtcgc agtttcgcagctgttatccaggccctggatggggaaatgcgccacgcagtatgcatcttt tatctcgttctccgagccctggacaccctggaagatgatatgaccatcagtgtggaaaag aaggtcccactgctgcacaactttcatactttcctttatgaaccagactggcggttcacg gagagccaggagaaggaccgacaagtgctggaggacttccccacgatctccttggagttt agaaatctggctaagaaatatcaaacagtgattgctgacatctgccagagaatgggaact gggatggcagagtttttggataagcatgtgacctccgaacgggagtgggacaagtactgt cactatgttgctggactggtgggaattggcctttctcgtctgttttcggcctcagagttt gaagaccccgtagttggtgaagacgtaaacctcgccaactctatgggactgtttctgcag aaaacaaacatcattcgtgattatctggaagaccaacgagaaggaagagagttttggccg caggaggtttggagcaggtatgttaagaagctgggggattttgctaagccagagaatatt gacttggccgtgcagtgcctgaatgaacttataaccaacgccctgcaccacatccctgat gtcatcacctacctgtcaagactccggaaccagagtgtgtttaacttctgtgctattcca caggtgatggccattgctaccttggctgcctgctacaataatcagcaggtgttcaaaggg gtggtgaagattcggaaggggcaagcagtgaccctgatgatggatgccactaacatgcca gctgtcaaggccataatataccagtatatggaagagatttatcacagaatccccaactca gacccgtcttccagtaaaaccaggcagatcatctccaccatcaggacgcagaatcttccc aactgccagctgatctcccgaagccactactccccactgtacctgtcctttgtcatgctc ttggctgccctgagctggcagtacctgagcaccctgacccaggtcacagaagactatgtt cagaccggagagcactga

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