Sciurus carolinensis (gray squirrel): 124982454
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Entry
124982454 CDS
T08117
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta isoform X1
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124982454
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncar01009
]
124982454
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
124982454
Protein phosphatases and associated proteins [BR:
ncar01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
124982454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
Fn3_Dep-1_4th
Ig_ILCR1
FN3_Tor_3rd
PTP_tm
CysR_MRC2_N
Ricin_B_lectin
Tc-R-P
Fn3_ELFN
Pur_ac_phosph_N
PTP-SAK
Glyco_hydro_66
DSPc
PTP-NADK
Y_phosphatase3
T6SS_Tse3_cat
PTPlike_phytase
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
124982454
NCBI-ProteinID:
XP_047405077
LinkDB
All DBs
Position
4:complement(129356057..129472803)
Genome browser
AA seq
2216 aa
AA seq
DB search
MEAEFYMAILTSLIFGSSEGFQIVHVQKHQCLFVNERVIMGSCSGTSQNQQWLWAEDGKL
LHVESALCLGFSSSSGGPSRAAVLTPCSQAPQWTCYEQEGFLEVENTSFFLKKQGPKVVV
KKGRKYLHSWMKINVNKEGKVVNESLCLKKAGLGAEVSVRSTRNTAPPQIPTTLFNTVPY
SPEHLLRNTTEAFIRNTTENHSHNSSKKPYPSLPATGIADTSWVPSTTWPFSSTTKETGL
GEPVRCNFTLTKSSVSSLSVFIQWRTLGSPCNFSLIYSSDTSGPSWCHPIRIDNSTYGCN
PKDLQAGTIYNFRIVSLDGEEKTVVLQTDPLPPAKFGISKEKTTSTSLPVWWTPSPGKVT
WYEVQLLDDNNQKMQGVQIQGSTSGNEHTFFNLTAGNYYNIAITSVSGEKRSSTVYTNGS
TVPSPVKDIGISSKTNSLLISWSHGSGNVEQYRLMLMDKGILVHDSIMDKRDTTYTFHGL
TPGHLYNLTIVTMAAGLKNYRWKLVRTAPMEVSNLKVTNDGSLTSLKVKWQRPLGDVSSY
NVTLSHQGTIMESRVLAPQVIETHFKDLAPGSLYQVTVSSISGELSAQKMAVGRTVPDKV
GNLEANNGGMRSLVVSWSPPAGDWEQYRILLFNDSVVLLNTTVGKEETQYVMDGVGLIPG
RQYEVEVIVESGNLKNSERCQGRTVPLAVLQLRVKHANETSLGIMWQTPAAEWEKYIISL
ADRDLLLIHKSLSKDAKEFTFTDLVPGRKYTATVTSISGDLKNSSSIKGRTVPAQVTGLH
VTNQGMTSSLFTNWTEALGDIEFYQVLLIHENVVIKNESVSSETNRYSFHSLKSGSLYSV
VVTTVSGGISSRQVVVEGRTVPSSVSGVTVNNSGRNDYLSVSWLPAPGDVDNYVVTLSHE
SRVVQSLVIAKSVSECSFSSLTPGRLYNVTISTRSGKYENHSFSQERTVPDKVQGVSVSN
SARSDYLKVSWVHATGDFDHYEVTIKNKNNFIQTKSIPKSENECVFVQLIPGRLYSVTVS
TKSGQYEASEQGNGRTIPEPVKDLTLRNRSTEDLHVTWSLADGDVDQYEIQLLFNDMKVF
PPFHLVNTATEYRFTSLTPGRQYKILVLTISGDVQQSAFIEGLTVPSAVKNIHISPNGAT
DSLTVTWTPGGGDVDSYVVSTFRQNQKVDSQTIPKHVSEHTFHRLEAGEQYQIVIASVSG
SLRNQIDALGRTVPASVQGLSADNAYSSHSLIVSWQKAAGVAERYDVLLLNENGILLSNT
SEPATAKQHKFEDLTPGKKYKIQILTVSGGLFSKEAQTDGRTVPAAVTNLRITENSTRHL
SFSWTASEGELNWYNIFLYNPDRTLQERAQVDPQIQSFSFQNLLQGRMYKMVIVTHSGEL
SNESFIFGRTVPAPVSHLKGSNRNMTDSLWFSWSPASGDLDFYELILYNPNGTKKENWKD
KDLTEWRFQGLVPGRKYTLCVVTHSGDLSNKVTGEGRTAPSPPSLLSFADVANTSLAITW
KGPPDWTDYNDFELQWLPRDALTVFNPYSNRKSEGRIVYGLRPGRSYQFSVKTVSGDSWK
TYSKPISGSVRTKPDKIQNLHCRPQNSTAIACSWIPPDSDFDGYSIECRKMDTQEIEFSR
KLEKEKSLLNIMMLVPHKRYLVSIKVQSAGVTSEVVEDSTITMIDRPPPPPPHVRVNEKD
VLISKSSINFTVNCSWFSDTNGAVKYFTVVVREADGSDELKPEQQHPLPSYLEYRHNASI
RVYQTNYFASKCAESPDSNSKSFNIKLGAEMDSLGGKCDPSQQKFCDGPLKPHTSYRISI
RAFTQLFDEDLKEFTKPLYSDTFFSLPITTESEPLFGVIEGVSAGLFLIGMLVALIAFFI
CRRKTSHGRERPSARLSIRRDRPLSVHLNLGQKGNRKTSCPIKVNQFEGHFMKLQADSNY
LLSKEYEDLKDVGRNQSCDIALLPENRGKNRYNNILPYDASRVKLSNVDDDPCSDYINAS
YVPGNNFRREYIATQGPLPGTKDDFWKMAWEQNVHNIVMVTQCVEKGRVKCDHYWPADQD
SLYYGDLILQMLSESVLPEWTIREFKICSEEQLDANRLIRHFHYTVWPDHGVPETTQSLI
QFVRTVRDYINRTPGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSVDIYGAVHDLRL
HRVHMVQTECQYIYLHQCVRDVLRARKLRSEQENPLFPIYENVNPEYHRDAVYSRH
NT seq
6651 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgaattttacatggcgatccttaccagcctgatcttcgggagctcggagggg
tttcagattgtccatgtccagaaacatcagtgccttttcgtaaatgagagagtgatcatg
ggctcctgcagtggcaccagccagaaccagcagtggctgtgggctgaggatggaaagctc
ctccacgttgaatctgcactgtgcctgggcttctccagttcctccggtggcccttcccgt
gcagccgtcctcaccccctgctcccaagcaccccagtggacctgctatgagcaggaaggg
ttccttgaggtagaaaatacctccttctttctcaagaaacaaggccccaaagtagtggtc
aagaaaggcaggaaataccttcatagctggatgaaaataaacgtcaacaaggagggaaaa
gtggtcaatgaaagcctctgcttaaaaaaagctggcctgggagcagaagtttcagtgagg
agcactagaaacacagctcctccccagatccctactactttatttaatacagttccatat
agcccggagcaccttcttaggaacaccacggaggccttcatcaggaacactacagaaaac
cacagccacaacagcagcaagaagccttaccccagtctgcctgcgactggaattgcagat
acatcgtgggtgccatcaactacttggcccttctccagtaccaccaaagagactggactg
ggagagccagtgagatgtaacttcacactgacgaagtccagtgtctccagcttgtcggtg
tttatccagtggagaactttagggtcaccatgtaactttagcctcatctatagcagtgac
acctcagggccctcgtggtgccaccccattcggatagacaactctacctatggatgtaac
cccaaggatttacaagcgggaaccatctacaacttcaggattgtttctctggatggagaa
gagaaaaccgtggtcttgcaaacagatcctttacctcctgctaagtttggaatcagtaaa
gagaagactacttcaaccagcctgcctgtttggtggactccatctcctggaaaagtcacc
tggtatgaggtgcagttattggatgataataaccaaaagatgcaaggtgtccaaattcaa
ggaagtacatcagggaatgaacacacgttttttaacctcactgctggtaattattataat
attgccattacatctgtttctggagagaagcgttcctctacagtttataccaatggatca
acagtgccatctccagtgaaagatattggtatttcatcaaaaactaattctctcctgatt
tcctggtcccatggttctggaaatgtggaacaatacaggctgatgctaatggataaaggg
atcctagttcatgacagtattatggacaaacgtgataccacctacacttttcatggactg
acacctggccacctctacaacctcactattgtgaccatggctgccggactgaaaaactac
aggtggaaactagtcaggacagcccccatggaagtctcaaatttgaaggtaacaaatgat
ggcagtttgacctctctgaaagtcaaatggcaaagacctcttggagatgtgagttcctac
aatgtgaccctgtctcaccaagggaccatcatggaatccagagtattagcaccacaggtc
attgaaactcactttaaagacttagcccctggaagtctttatcaagttactgtcagcagt
atttctggtgaactgtctgctcagaagatggcagtgggcagaacagtaccagacaaagtt
ggaaatctggaggcaaacaatggtgggatgaggtcccttgtggtgagctggtcgccccct
gctggagactgggagcagtaccggatcctgctcttcaatgattcggtggtgctgctcaac
accactgtgggaaaggaggaaacacagtatgtcatggatggtgtgggcctcatacccgga
agacagtatgaggtagaagtcatcgttgagagtggaaatctgaagaattctgagcgttgc
caaggcagaacagtccctctggctgtcctccagcttcgtgtcaaacatgctaatgaaacc
tcactgggcatcatgtggcagacccctgctgcagagtgggagaaatacataatctctcta
gctgacagagacctcttactcatccacaagtcactctccaaagatgccaaagaattcact
tttactgacctggtacctggacgaaaatacacagctacggtcaccagtattagtggagac
ttaaaaaattcctcttcaataaaaggaagaacagtacctgcccaagtgactggcctgcat
gtgaccaaccaagggatgaccagtagtctatttaccaactggacagaggcactgggagac
atagaattctaccaagtcttactgatccatgaaaacgtggtcatcaagaatgaaagtgtc
tccagtgagactaacagatacagctttcactctctgaaatcaggcagcctctactctgtg
gtggtaacaacagtgagcggagggatctcctccagacaagtggtggtggaaggaaggaca
gtcccttccagtgtgagtggagtgacagtgaacaattcaggtcgtaatgactacctcagt
gtttcctggctgccggcacctggagacgtggataactatgtggtgaccctctcccatgag
agcagggtggttcagtccctggtcattgccaagtctgtcagcgagtgttccttcagttcc
ctcaccccaggccgcctctacaatgtgaccataagtacaaggagtggcaagtatgagaat
cattccttcagccaagagcggacagtgcctgacaaggttcagggtgtcagtgttagtaac
tcagccagaagtgactatctaaaggtgtcctgggtgcatgccactggggactttgatcac
tatgaagtcaccatcaaaaacaaaaacaacttcattcaaaccaagagcattcccaagtcg
gaaaatgagtgtgtatttgttcagctcatccctggacgattatacagtgtcaccgttagt
acaaaaagtggacaatatgaagccagcgaacaagggaacgggagaacaatcccagaacct
gttaaggatctaacactgcggaataggagcactgaggacctgcatgtgacctggtcccta
gctgatggggatgttgaccagtatgagatccagctgctcttcaatgacatgaaagtattt
cctccttttcaccttgtaaatactgcaaccgagtatcggttcacctccctaacaccaggg
cgccagtataaaattcttgtcttgacgatcagtggggatgtacagcagtcagccttcatt
gaaggcttaacagttcccagtgctgtcaaaaatattcatatttctcccaatggagcaacg
gatagcctgacagtgacttggaccccgggtggtggcgatgttgattcctacgtggtatca
acattcagacagaatcagaaggttgactctcagaccatccccaagcacgtctctgagcac
acgtttcatagactggaggcaggggagcagtaccaaattgtgattgcctcggtcagtggg
tcactaaggaaccagatagacgcactcgggcggacagttccagcatctgtccagggacta
agtgcagacaatgcatacagcagtcattccttaatagtaagttggcaaaaagctgctggt
gtggcagagagatatgatgtcctacttctaaatgaaaatggaatccttctgagtaacaca
tcagaaccagctactgctaaacagcacaaatttgaagatctaacaccaggcaagaaatac
aagatacagattctaactgtcagcggagggctctttagcaaggaagcccaaactgacggc
cgaacagtcccagcagctgtcaccaatctgaggatcacagaaaactccactagacacctg
tccttcagttggactgcctcagagggagagctcaactggtacaacatctttctgtataac
ccggatcgaactcttcaggaaagggcccaagtggacccacaaatccagagcttctctttc
cagaacttgctacaaggtcgaatgtacaaaatggtgatcgtgactcacagtggggagctg
tctaatgagtctttcatatttggtagaacagtcccagctcctgtgagtcatctcaaggga
tccaatcggaacatgacagatagcctttggttcagctggagtccagcctctggggacctt
gacttttatgagctgattctctacaatcccaatggcacaaaaaaggaaaactggaaagac
aaggacctgacagagtggcgttttcagggtcttgtccctggaaggaagtacacactgtgt
gtggtaactcacagtggagatctcagcaataaggtcacaggggagggcagaacagcccca
agtcctcccagtcttttgtcatttgctgatgttgcaaacacatctttggccatcacctgg
aagggacccccagactggacggactacaatgactttgagctacagtggctccccagagat
gcactcactgtcttcaatccctacagcaacagaaaatcagaaggacgcattgtgtatggt
cttcgtccgggcagatcctatcaattcagtgtcaagactgtcagtggagattcctggaaa
acctatagcaaaccaatttctggatctgtgaggacaaagccggacaaaatacaaaacctg
cattgccggccccagaactcgacagccattgcctgttcttggattcctccggattctgac
ttcgatgggtatagtattgaatgccgcaaaatggatacccaagaaattgagttttcccga
aaactggagaaagaaaaatctctgctcaacatcatgatgctggtaccccataagaggtac
ctggtgtccatcaaggtgcagtcggctggtgtgaccagtgaggtggttgaagacagtacc
atcacaatgatagaccgtcctcctcctccacctccacatgttcgtgtgaatgagaaggat
gtgctaattagcaaatcttccatcaactttactgtcaactgcagctggttcagtgacacc
aacggagctgtgaaatacttcacagtggtggtgagagaggctgatggcagcgatgagctg
aagccagaacaacagcaccctctcccttcttacctggaatacaggcacaatgcctccatt
cgagtgtatcaaaccaattattttgccagcaaatgtgccgaaagtcctgacagcaactcc
aagagttttaacataaagcttggagcagagatggacagcctaggtggaaaatgcgatcct
agtcagcaaaaattctgtgatggaccactgaagccacacacttcttacagaatcagcatt
cgggcttttactcagctgtttgatgaagacctgaaagaattcacaaagccactctactca
gacacatttttctctttgcctatcaccactgagtcagagcccttgtttggagtcatcgaa
ggtgtgagtgctggcctgtttttaattggcatgttggtggctctcattgccttcttcatc
tgcagacggaaaacgagccatggtcgagaaaggccctctgcccgcctgagcattcgtagg
gatagaccattatcagttcacttgaatctgggccagaaaggtaaccggaaaacttcttgt
cccataaaagtaaatcagtttgaaggacatttcatgaagctgcaggctgactccaactac
cttctatccaaggaatatgaggacttaaaagacgtgggccgaaaccagtcatgtgatatt
gcactcttgccagaaaatagagggaaaaatcgatacaacaatatattgccctatgatgcc
tcaagagtgaagctgtccaacgtagatgatgacccatgctccgactacatcaatgccagc
tatgtcccaggcaacaacttcagaagagaatacattgctactcagggaccacttcctggc
accaaggatgacttctggaaaatggcgtgggaacagaacgttcacaacattgtcatggtg
actcagtgcgtggagaagggcagggtaaagtgtgaccattactggccagcagatcaggac
tccctctactatggggacctcatcctgcagatgctctcagagtcggtgctgcccgagtgg
accatcagggagtttaagatatgcagcgaggagcagcttgatgcaaacagactcatccgt
cactttcactacacagtgtggccagaccatggagtcccagaaaccacccagtccttgatc
cagtttgtgagaactgtcagggactacatcaacaggactcctggtgcagggcccaccgtg
gtgcactgcagtgctggtgtgggtagaactggaacctttattgccttggaccgaatcctt
cagcagttagattccaaagattctgtggacatttatggagcagtgcatgacctaagactt
cacagggttcacatggtccagacggagtgtcaatacatatatctacatcagtgtgtaaga
gatgtcctcagagcaaggaagctgcggagtgaacaagaaaaccccttgtttcccatctac
gaaaatgtgaatccagagtatcacagagatgcagtctattcaaggcattaa
DBGET
integrated database retrieval system
