Sciurus carolinensis (gray squirrel): 124982511
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Entry
124982511 CDS
T08117
Name
(RefSeq) LIM domain and actin-binding protein 1-like isoform X1
KO
K23026
LIM domain and actin-binding protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124982511
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
124982511
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
124982511
NCBI-ProteinID:
XP_047405223
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Position
4:complement(110487670..110577536)
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AA seq
773 aa
AA seq
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MESTPFNRRQWTSLSLRVTAKELSLVNKNKSSTIVEIFSKYQKAAEEANMEKKKSNSENL
PQHFRKGTLTVLKKKWENPVLGAESHTDPLRNSSIEVRHRVNHPPAEVTSNSTSGVDHDE
QSQSRRRFGSRPEALTQRRYPCSEDSEDLKDHTTESKKMENCLGESRHEIERSEVSENIE
ASGKIEKYNIPLNRLKMMFEKGESTQTKILWAQSRNTGGRRISDNSYSLDDLEIGPGQLS
SSAFNLEKNESKRNLELPRLSETSIKDRMAKYQAAVSKQSSSTNYTNELKASGGEIKTHK
LEQKENVPPGPEVCVSHQEGEKASTTENSLMTHSTRAEDDDSHKPLPLALEAGNSHVKSE
AQQLVSPKPLSPDARASGLSESSPPKAVKKFQAPARETCVECQKTVYPMERLLANQQVFH
ISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNEN
EETLERSSQLPNSGDTPQSPGVEDAPIAKVGVLAASMEAKASSQREKEDKPAETKKLRIA
WPPPSELGSSGSALEEGIKVCKPKWPPEDEIFKPEALEDVDLDLKKLRRSSSLKERSRPF
TVAASFRTSSVKSPKALSSPIRKGWSMSEQSEGFAGEIVPERKQVESVQVSEKNGSVGKM
AWQNKESKGEEAGRRRKEIHSFEMGSENLIENGANVDEDDINLLKQQSPLESKSPNRSSF
VDDISTKEFTTQNQKSQDVGFWEGEVVQELSVEEQIKRNRYYDEDEDEDEDEE
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaactccatttaatagacggcaatggacttcactatctttgagggttacagcc
aaagaactttctcttgtcaacaagaacaaatcatcaactatcgtggaaatattctccaag
taccagaaagcagctgaagaggccaacatggaaaagaagaaaagtaactctgaaaatctc
ccccagcactttagaaagggtacactgactgtgttaaagaagaagtgggagaatccagta
ctgggagcagaatcgcacacagaccctctacgaaacagcagcattgaggttagacacaga
gtcaatcaccctcctgctgaagtgacaagcaactctacttctggagttgaccacgacgaa
caatcccagtccagacggagatttggatcacgtcctgaagcccttactcagcgccggtat
ccctgctccgaggacagtgaggatcttaaagaccacacaacagaaagcaaaaaaatggaa
aattgtctgggagagtccaggcatgaaatagagagatctgaagtcagtgaaaacatagaa
gcttcaggcaaaatagaaaaatacaatattccactgaacaggcttaagatgatgtttgag
aaaggtgaatcaactcaaaccaagattctttgggcccaaagccgaaatacaggtgggagg
aggatctctgacaacagctattctttggatgacttggaaataggtccaggtcagttatca
tcctctgcattcaacttggagaaaaatgagagtaagagaaacctggaactcccacgcctc
tcagaaacctccataaaggatcgaatggccaagtaccaggcggctgtgtccaaacaaagt
agttcaaccaactatacaaatgagttgaaagccagtggtggtgaaatcaaaactcataaa
ttggagcaaaaggagaatgtgcccccaggtcctgaggtctgtgtctcccatcaggaggga
gaaaaggcttctacaactgagaatagcctgatgacccattccactcgtgctgaagatgat
gactcccataaacctttgcccttagcgctcgaagcaggtaactcccacgttaagagtgag
gcccagcagctggtgtcccccaaaccactgagtcctgatgccagagcctccggcctttct
gaaagttctcctcccaaagcagtgaagaagtttcaggcacctgcaagagagacctgcgtg
gaatgtcagaagacagtctacccaatggagcgtctcttggccaatcagcaggtgtttcac
atcagctgcttccgttgttcttattgcaacaacaaacttagtctaggaacatatgcatct
ttacatgggagaatctattgtaagcctcacttcaatcaactctttaaatctaaaggtaac
tatgatgaaggctttgggcacagaccacacaaggatctgtgggcaagcaaaaatgaaaat
gaagagactttggagagatcatcccaacttccaaattcaggggatactcctcaaagccca
ggagtagaagatgcccccattgcgaaggtgggtgtgctggctgcaagtatggaagccaag
gcctcctctcagcgggagaaggaagacaagccagctgaaacaaagaagttgaggatcgcc
tggccacccccatctgaacttggcagttcaggaagtgccctagaggaagggatcaaagtg
tgtaagcccaaatggcctccagaggatgaaatcttcaagcccgaagctcttgaggatgta
gatctagatctgaagaaactgaggcgatcttcttcactgaaggaaagaagtcgcccattc
actgttgcagcttcatttagaacctcttctgtcaagagcccaaaagctttgtcctcacct
ataaggaaaggttggagcatgtcagagcagagtgaggggtttgcaggagagatagtacca
gaaaggaaacaagtggagagtgtccaggtctctgagaagaatgggagtgtgggaaaaatg
gcctggcaaaacaaggaatctaaaggagaagaggcagggaggagaagaaaggaaatccat
agttttgagatggggagtgagaatctcatagaaaatggtgcaaatgtagatgaagatgat
atcaacctcctcaaacagcagtctccactagaatctaagtctccaaataggtccagtttt
gtagacgacatctccactaaagaatttactactcagaatcagaaatcccaggatgtggga
ttctgggagggagaagtggtgcaagagctatctgtggaagaacagataaagagaaatcgg
tactatgatgaggatgaagatgaggatgaggatgaagaatga
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