Sciurus carolinensis (gray squirrel): 124982548
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Entry
124982548 CDS
T08117
Name
(RefSeq) histone deacetylase 7 isoform X1
KO
K11408
histone deacetylase 7 [EC:
3.5.1.98
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04613
Neutrophil extracellular trap formation
ncar05034
Alcoholism
ncar05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
124982548
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
124982548
09165 Substance dependence
05034 Alcoholism
124982548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124982548
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
124982548
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
124982548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
124982548
NCBI-ProteinID:
XP_047405319
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All DBs
Position
4:complement(108273310..108308978)
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AA seq
1141 aa
AA seq
DB search
MRSALGYNSVPTLSPHHLTFPACCFQGMETLVVRNLGPSGPTSGAGDNKETQGIKFLLGS
AELPAEPIPRSPAPAPAVTSPRPPRSPPPPPRHSLGWPEEQGRLGVTGSERVGVGEFGDW
AATVLFCLPHKPARPGHPLHPPGHSDGTQVSPGAHCLSPPGTGCPTPCADTPSPQLQPMD
LRVGQRPTVEPQPEPTLLALQHPQRLHRHLFLAGLQQQQQQQQQQQQQQRTAEPMRLSMD
PPMMPELQGTQQEQELRQLLNKDKSKRSAVASSVVKQKLAEVILKKQQAALERTVHPNSP
SIPYRTLEPLDTEGAARSMLSSFLPPVPSLPSDPPEHFPLRKTVSEPNLKLRYKPKKSLE
RRKNPLLRKESAPPSLRRRPAETFGDSSPSSSSTPASGCSSPNDSEHGPNPVLGSEALLG
QRLRLQETSLAPFALPTVSLLPTITLGLPAPARADGDRRTHPALGPRPVLGSPHAPLFLP
HGLEPEAGGTLPSRLQPILLLDPSVSHTPLLTVPGLGPLPFHLAQSLLTTERLSGSGLHW
PLSWTRSEPLPPSATASPLLGSLQPRPERLKPHIQLIKRPAKMSEKPRLQQIPSAEDLET
DGGGVGQVVDDVLEHRESSHGQPEARGPVPLQQHQQVLLWEQQRLAGRLSRGSMGDSMLL
PLAQGRHRPLSRTQSSPAAPASLPTPEPTCQARVLTSSEAPPRTLPFTTGLVYDSVMLKH
QCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHVLLYGT
NPLSRLKLDNGKLEGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWASGSVTDLAFK
VASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQGKASKILIVDWDVHHG
NGTQKTFYQDPSVLYISLHRHDDGNFFPGSGAVEEVGAGSGEGFNVNVAWAGGLEPPIGD
PEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLA
GGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEEGWKQKPNLNAIRSLEAVIRVH
SKYWGCMQRLASCPDSWVPRVPGADAEEVEAVTALASLSVGILTEDRPSEQLVEEEEPMT
L
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgaggagtgctctgggctataattccgtccccaccctgtctccacaccacttaactttt
cccgcatgttgctttcagggaatggaaaccctggtggtcagaaacctggggccttcaggg
ccaacttcaggagctggggataataaggaaacccaagggataaaattcctcttgggttca
gctgaactccctgcagagcccattccaagaagcccagctccggctcctgcggtaacatcc
ccgcgccccccaagaagtccccccccccccccccgccactccctaggatggccggaggag
cagggcaggctgggagttacaggttcggaaagagtcggggtgggggaattcggcgactgg
gctgcaaccgtcttgttttgcttgccccacaaacctgcacgtccggggcatccgctgcac
cctccggggcattcagatgggacccaggtgagcccgggtgcccactgcctcagtcctcct
ggcacaggctgccccacgccctgtgcagacacgccaagccctcagcttcagcccatggac
ctgcgagtgggccagcggcccacagtggagccccagccagagcccacactgctggccctg
cagcatccccagcgcctgcaccgccacctcttcctagcgggcctgcagcagcagcagcag
cagcagcaacagcagcagcaacaacagcgcacagccgagcccatgaggctctcaatggac
ccaccgatgatgcctgagttgcaggggacacagcaggagcaagagctgcggcaacttctc
aataaggacaagagcaagcgaagcgctgtagccagcagcgtggtcaagcagaaactggca
gaagtgatcctaaagaaacagcaagcagccctggagagaactgtccatcccaacagcccc
agcattccctacagaactcttgagccattggacacagaaggagctgcccgctccatgctc
agcagctttttgcctcccgttcccagcctgcccagtgatcccccagaacacttcccccta
cgtaagacagtctctgagcccaacctgaagctacgctacaagcctaagaagtccctggag
cggaggaaaaacccactgcttagaaaagagagtgcgccgcccagtctccggaggcggcca
gcagagacctttggagactcttcccctagtagcagcagcacgcctgcgtcagggtgcagc
tcccccaatgacagcgagcatggccccaaccctgtcctgggctcagaggcgctcttgggc
cagaggctgcggctgcaggagacttctctggccccgttcgccttgccgacagtgtccttg
ctgcccacaatcacgctggggctgcccgcccctgccagggctgatggtgaccgcaggacc
catccagctctgggccctcgtccagtcctggggagcccccatgctcccctcttcctgccc
cacggtctggagcccgaggctgggggcaccttgccttctcgcctgcagcccattctcctt
ctggatccctcagtctctcacacccctctgctgactgtgccagggcttgggcccttgccc
ttccacttagcccagtccctactgaccaccgagcggctctctgggtcaggcctccattgg
cctctgagctggacccgctcagagcccctgccccccagtgccactgcttccccactgctg
ggctccctgcagccccgcccggagcggctcaaacctcacatccagctgatcaagagacca
gccaagatgagtgagaagccccgactgcaacagataccctcagctgaggacctagagacg
gatggcgggggagtagggcaggtggtggatgatgtcctggaacacagggagtctagtcat
gggcagcctgaagccagaggccctgtacctctccagcagcaccagcaggtgttgctctgg
gaacagcagcgactggctgggcggctttcccggggaagcatgggggactctatgctgctt
cctctggcccagggcagacaccggcccttgtctaggactcagtcttccccagctgcacct
gcctctctaccaaccccagagcccacctgccaggcccgagtcctcaccagctcagaggct
ccccccaggaccctgcccttcaccacagggctggtctatgactcagtcatgctgaagcac
cagtgctcctgtggagataacagcaggcaccccgagcacgctggccgcatccagagcatc
tggtcccggctgcaggagcggggcctccggagccagtgtgagtgtctccggggccggaag
gcctctttggaggaactgcagtcggtccactccgagcgacatgtcctcctatatggcacc
aacccactcagccgccttaaactggacaatgggaagctggaagggctcctggcacagcgg
atgtttgtgatgctgccctgtggtggggttggggtggatactgacaccatctggaacgag
ctgcattcctccaatgcagcccgctgggcctctggcagtgtcaccgacctcgccttcaaa
gtggcttctcgtgagctaaagaatggttttgctgttgtgcggcccccaggacaccatgca
gatcattctacagccatgggcttctgcttcttcaactcagtggctattgcctgccggcag
ctgcaacaacagggcaaggccagcaagatcctcattgtagactgggatgttcaccacggc
aacggcacccagaaaaccttctaccaggaccccagtgtactctacatctccctgcatcgc
catgatgatggcaacttcttcccaggcagtggggctgtggaagaggtgggggctggaagt
ggtgagggtttcaacgtcaacgtggcctgggctggaggcctggaaccccccataggggat
cctgagtacctggctgccttcaggatagtcgtgatgcccatcgcccgagagttctctcca
gacctggtcctggtgtctgctgggtttgatgctgccgagggtcacccagccccactgggt
ggctaccatgtttctgccaaatgtttcggatacatgacgcagcaactgatgaacttggca
ggaggtgcagtggtgctggccttagagggtggccatgacctcacagccatctgtgatgct
tccgaggcctgcgtggctgctcttctaggcaacaaggtggatcccctttcagaagaaggc
tggaaacagaaacccaaccttaatgcaatccgctctctggaagctgtgatccgggtgcac
agtaaatactggggctgcatgcagcgcctggcctcctgtccagattcttgggtgcccaga
gtgccaggggctgatgcagaagaagtagaagctgtgaccgcactggcatccctctctgtg
ggcatcctgacagaagacaggccctcagagcagctggtggaagaggaagaacctatgact
ctctaa
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