Sciurus carolinensis (gray squirrel): 124982592
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Entry
124982592 CDS
T08117
Name
(RefSeq) nascent polypeptide-associated complex subunit alpha, muscle-specific form isoform X1
Organism
ncar
Sciurus carolinensis (gray squirrel)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NAC
HYPK_UBA
Motif
Other DBs
NCBI-GeneID:
124982592
NCBI-ProteinID:
XP_047405434
EnsemblRapid:
ENSSCRG00010003512
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All DBs
Position
4:complement(116941014..116954113)
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AA seq
2193 aa
AA seq
DB search
MPGEATETVPATEQELPQPQAETAVLPVPSALNVTASLGQSRPTLTPPCSLTPQQCPVAI
ANQPSPFPSPSTIASIPFEAPFPQPSSGTAMPLETVPNTPTFLPHLIGPPISPAALALAS
PMIGPTLKGAHSSSAPLALIALAPHSVQKSSAFPPNPVASPPTVAVAESGSVTCLPTPIT
PSEPKPSPIQVPSQVLPNPKATTPSSGPPGIINAIPSHVVNPLASVQSGVTSCPLTPSIT
PSTITSQIKGIPISSALIPQNPLSLSLKGPVSSPAALSLSTQSIPAVVSSQTVAPSIPSV
FPSSLGSHLGPLHQSSLGSSLQPLGQAGPSTLSNPAVNTISLDHCSLGTSYPSQRSVIPP
LSSRNELVTGTVAALPKRSPASSLVLSVDKGPSTVTGIASYPSGSSNVTTTMSLSPSALL
ILKDSPNATHQPLGTQILASPGTDLKETPISSVGTTPLLMTNPSVISAAHTTFEVAATVS
PPVSSGPISSEEPASPTALVMSPVAQKELPSQIATTLGIPVCPLPALISPAQTGHPTKEN
PTLLPSALSAPKNSSSPQGTSSLEIIPPETTVPKKTLVGPLPVAEAASATASSLGVNSPT
SIVKTDAYTSPDPVSLLLKSSIAAPTVAQVPLENVDRVGMAPKSYPNEKDTSALAFLPLV
SPASESCPVAPSMTLSSENVSVSTVALALAPEIPKSVPFPTLPPAGIALSTAKNVDGISQ
TSSLASLASSPVCPNEDPGDSVSSKGIITYIADSPCPLGTDVSPQTKRPLTKKGSPSPDV
PAGNLSSISPVEASFLPEANISFQGPKGSLTKKDSPTPKKAQATLAPKGVPIPPAVAPSL
TQKTPASPSPKGTPTAPAVAPTSPKKDPVTTASSGIPAAPAVTPSQKKTPTPSPKGAPTL
PSDVPPCPKESLTAPTVASPHKKKTPSPKGVPTPPAVTSPSPKKPPRTPSPKEAIVTPSP
KGDPSPPAVTPSSPKKTVANTAPKEVPTPPSPKKALTTPSPKGTPTETPPSPKKTPTTLS
PKETPTEAPPSSKGAPAPTAVTSPSPKKPPTTPSPKETIVTPSPKEVPTPPAITPPTPKK
TPANTAPKEVVTPPSPKKALTTSSPKGTPPATPPSPKRAPTTPSPKETTVTPSPKGVPTP
PAVTPPSPKKAPTTPSPKETTVTPSPKGVPTPPAVTPPSPKGTPTETPPSPKKAPTTLSP
KETTVTPSPKGVPTPPAVTPPSPKGTPTETPPSPKKAPTTPSPKETTVTPSPKGVPTPPA
VTPPSPKKTPTTPSPKGTPTETPPSPKGSPTPATVTPPSPKKAPLTLSPKGTPTETPPFP
KGAPTPTAVTLPSSKKVPTTPSPKGTQTETPPSPKEATVIPSSKGDPTPPAVTPPSPKKA
PASAAPKQATVTPSPKKAPASAAPKEATVTPSPKGVSTPPTVTPPSPKKAPASAAPKQAT
ATPTLKKAPASAAPKQATVTPSPKGVSTPPTVTPPSPKKAPAGAAPKETTVAPAPKKAPA
SAAPKEATVTPSPKGVSTPPTVTPPSPKKAPASAAPKEATVTPSPKKAPASAAPKEATVT
PSPKGVSTAPANTPPSPKKTPATAASKETPATPSSKGAASPKKATATAAPKEASTPPVVT
LLSPKKPPASVPPKDAQTTSSPRGVPTPPVDTPPTSKKAPATAAPKEATETPSPEKDSAT
TVPKEAPPKKSPATPSSKGIPTPPDTTSPPKKSSAPKGASIPPAVTSPSPKEAPATPSSK
GSPTPRAVNLPSHQEASSPKEAHILPGITHASPKDSPNSPVSVTCTTGAIAPKEPEGVPS
KKSPRALKEVLVAPAPENEHITVPTQKGPGSKKNSAALPLKCSDPSTKIDAKVPLSTVTP
IPLLMDPVSPAENKDPFHSPLSKISTPLAGVASEKVLPIAGSASASPAHTPPVSLPLAPS
PVPPLLPKQQFLPTSTGLVLESPSKPPAPADEDELPPLIPPEPISGGVPFQSVLVNMPTP
KPAGVPAPTPSAKQPVLKNNKGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEE
PVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIV
FGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIE
LVMSQANVSRAKAVRALKNNSNDIVNAIMELTM
NT seq
6582 nt
NT seq
+upstream
nt +downstream
nt
atgcccggtgaagccacagaaaccgtccctgctacagagcaggagttgccacagccccaa
gctgagacagctgtgcttcctgtgccttcagccttgaatgtcactgcttccttagggcag
tctagaccaacccttacccctccttgctccctcacccctcaacaatgccctgtagcaatt
gctaaccagccttccccatttccttctccctctactattgcttcaatcccttttgaagct
ccttttccccagccatcctctggaactgccatgcctttggaaactgtccctaacacccca
actttcctaccacaccttatagggcctcccatctccccagctgccttagctctggcctct
cccatgatagggccaactctgaaaggtgcccattcctcttcagctcccttggccctcatt
gcattggctccccattcagttcagaagagttctgcttttccacctaaccctgttgcctca
cctccaacagttgctgtggctgagtcagggtcagtgacatgtctaccaactcccattact
ccctcagaaccaaaaccctctcctattcaggttccctctcaggtactccctaatccaaaa
gctactaccccaagttcaggtcctccgggtataatcaatgctattccttcccatgttgta
aatcctctggcctctgttcaatctggagtaacctcttgtcctctgacaccatccattact
ccctcaaccattacttcccagattaaaggtatccccatttcctcagctctgatcccacaa
aacccattaagcctcagcctgaaggggcctgttagttcacctgctgccttatcactttca
actcagtctattcctgcagtggtctcttctcaaactgtggctcccagcatcccatcagtt
ttccctagttctctgggctctcatcttggacctttacatcagagttctttgggttcttct
ctccaacctttaggtcaagcaggtcctagtacactgtcaaatcctgcagtgaataccatt
tctttagatcattgttccttgggtacctcttatccatctcagagatctgtaattcctccc
ctttcttccagaaatgaactggttactggtactgtggctgctcttccaaaaaggtctcca
gcttcctctctggttctgtctgttgacaaaggcccctctacagtgactggcatagcctcc
tacccttctggctcttcgaatgtaactactactatgtcattatctccttcagccttgctc
attcttaaagactctcctaatgccactcatcagcctttggggactcagattcttgcctct
ccaggaacagacttgaaagaaacacctatctcctctgttggaactaccccacttctgatg
actaacccttctgtgatttctgcagcacatactacctttgaggtagctgctactgtgtct
cctccagtttcatcaggtcccatcagtagtgaagaaccagcttcccccactgccttggtt
atgtcacctgtggctcaaaaagagcttccttctcagatagcaactactctgggtatacca
gtctgtcctctgccagctcttatatctccagcccagacaggacaccccaccaaggaaaac
cctactctactaccttcggccctctcagcccctaaaaattcctcctctccccaaggtaca
tcatctttggagataattcctcctgaaaccactgtaccaaagaaaacccttgtagggcct
ctccctgtagctgaggcagccagtgctactgcgtcttctctgggtgttaactccccaacc
tctatagtcaagacagatgcttatacaagcccagaccctgttagtctgcttcttaaaagt
tctattgctgctccaacagtggctcaggttcctttggaaaatgttgatcgtgtggggatg
gctcctaaaagttacccaaatgagaaggacacttctgctcttgcttttttacctttggtt
tctccagcctctgaaagttgcccggtggctccatctatgactttatcctccgagaatgtt
tctgtttctacagtagcattggcactggctcctgaaattcccaagtctgtgccctttccc
actcttccaccagctgggattgctctgtccactgcaaagaatgttgatggtatttctcag
acctcgtcattggcatctttagcttcctctcctgtgtgcccaaatgaggaccctggtgat
tctgtgtcttccaaaggaattataacttacatagctgactcgccatgtcctttagggact
gatgtgtctcctcagactaaaagacctctaaccaagaagggttctcctagccctgatgtt
cctgctggaaatctatcttctatttctccagttgaagcttccttccttccagaggccaat
atttcttttcaaggccctaaaggctcactaaccaaaaaggattctcccactcccaaaaag
gcacaagcaactctggccccaaaaggggtccccattcccccagctgttgctccttccttg
acccaaaagaccccagcaagcccatctcccaaagggactcccactgcccctgctgtggct
cctacctcccccaaaaaggacccagtaaccacagcctccagtgggatccccgctgcccca
gctgtgactccttcccaaaaaaagacaccaactccatcccccaaaggggcccccaccctg
ccatctgatgttcctccctgtcccaaagagtccctcactgccccaaccgtggcttctccc
cacaaaaaaaagacaccatcccccaaaggagtccccactcccccagctgtgacttctccc
tccccaaaaaagccaccaagaactccatctcccaaagaggccatagtaaccccatccccc
aaaggggacccctctcccccagctgtaactccttcctctcccaaaaagaccgtagcaaat
acagcccccaaagaggttcccactcccccatccccaaaaaaggcactaaccactccatcc
cccaaagggaccccaactgagactcctccctccccaaaaaagacaccaacaactctatcc
cccaaagagaccccaactgaggctcctccctcctccaaaggagcccccgctcccactgct
gtgacctccccctccccaaaaaagccaccaacaactccctcccccaaagagaccatagta
accccatcccccaaagaggtccccactcccccagctataactcctccaactcccaaaaag
accccagcaaatacagcccccaaagaggttgttactcccccatccccaaaaaaggcacta
accacttcatcccccaaagggaccccacctgcaactcctccctccccaaaaagggctcca
acaactccatcccccaaagagaccacagtaaccccatcccccaaaggggtccccactccc
ccagctgtgactcctccctccccaaaaaaggccccaacaactccatcccccaaagagacc
acagtaaccccatcccccaaaggggtccccactcccccagctgtgactcctccctcgccc
aaagggaccccaactgaaactcctccctccccaaaaaaggccccaacaactctatcccct
aaagagaccacagtaaccccatcccccaaaggggtccccactcccccagctgtgactcct
ccctcccccaaagggaccccaactgaaactcctccctccccaaaaaaggccccaacaact
ccatcccccaaagagaccacagtaaccccatcccccaagggggtccccactcccccagct
gtgactcccccctccccaaaaaagaccccaacaactccatcccccaaagggaccccaact
gagactcctccctcccccaaaggatcccccactcctgcaactgtgactcccccttcccca
aaaaaggccccattaactctatcccccaaagggaccccaactgagactcctcctttcccc
aaaggagcccccactcccacagctgtgactctcccctcctcaaaaaaggtaccaacaact
ccatcccccaaagggacccaaactgaaactcctccctcccccaaagaggccacagtaatc
ccatcctccaaaggtgaccccactcccccagctgtaactcctccctcccccaaaaaggcc
ccagcaagtgcagcccccaaacaagccacagtaactccctccccaaaaaaggccccagca
agtgcggcccccaaagaggccacagtaacaccatcccccaaaggggtttccactccccca
actgtaacccctccctcccccaaaaaggccccagcaagtgcagcccccaaacaggccaca
gcaactcccaccttaaaaaaggccccagcaagtgcagcccccaaacaggccacagtaaca
ccatcccccaaaggggtttctactcccccaactgtaacccctccctcccccaaaaaggcc
ccagcaggtgcagcccccaaagagactacagtagctcccgccccaaaaaaggccccagca
agtgcagcccccaaagaggccacagtaaccccatcccccaaaggggtttccactccccca
actgtaacccctccctcccccaaaaaggccccagcaagtgcagcccccaaagaggccaca
gtaactccctccccaaaaaaggccccagcaagtgcggcccccaaagaggctacagtaacc
ccatcccccaaaggggtctccactgccccagctaacactcctccctctcccaaaaagacc
ccagcaactgcagcatccaaagagacccctgcaaccccatcctccaagggggctgcttct
cccaaaaaagccacagcaactgcagcccccaaagaggcctctactccccctgttgtgact
cttctctctcccaaaaagcccccagcaagtgtaccccccaaagatgcccaaacaacctca
tcccccagaggggtgcccactcccccagtggacactcctcccacttccaaaaaggcccca
gcaactgcagcccccaaagaggccacagaaaccccctcccctgaaaaagactcagcaacc
acagtccccaaggaagcccccccaaaaaagtcaccagcaaccccatcctccaaaggaatt
cccactcctccagacactacttcccctcctaaaaagtcctcagcccccaaaggggcctcc
attcccccagctgtcacttctccctccccaaaagaggccccagctaccccatcctccaaa
ggctctcccactcccagagctgtgaatcttccctctcaccaagaggcttcatcccctaag
gaggcccacattctcccaggcattactcatgcctcccccaaagactcccctaattcccca
gtgtcagttacatgtaccacaggagccattgctcctaaagaacctgaaggcgtcccctca
aagaaaagccccagggctctcaaagaagtacttgttgccccagctccagaaaatgaacac
atcacagttcccactcagaaaggcccaggaagcaagaagaattcggcagctttgcctctt
aagtgctcagatccctcaactaagattgatgctaaagtacccctttctacagtgactccg
attcctctgctgatggaccctgtttctcctgcagaaaacaaagatccttttcactcgcct
ctgtcaaagatatctacccctctagcaggagttgcctctgagaaggtccttcctatagct
ggatcagcatctgcgtctccagcacacaccccaccagtctccctgcctcttgctccttcc
ccagttccccctctgcttcctaaacaacagtttctgccgacctccactgggctggtgctg
gaatcaccctctaagcccccagcccctgctgatgaggatgagctgccgcctctgattccc
ccggaaccaatctctgggggagtgcctttccagtccgtccttgtcaacatgcccaccccc
aaacctgctggggtccctgccccaaccccctctgccaagcaacctgttctgaagaacaac
aaggggtctggaacagaatctgacagtgatgaatcagtaccagagcttgaggaacaagat
tccacacaagcaaccacacaacaagcacagctggcagctgcagctgaaatcgatgaagaa
ccagtcagtaaagcaaaacagagtcggagtgaaaagaaggcacgaaaggctatgtccaaa
ctgggtcttcgacaggttacaggggttactagagtcactatccgaaaatctaagaatatc
ctctttgtcatcacaaaaccagatgtctacaagagtccagcttcagatacctacatagtt
tttggggaagccaagattgaagatttatctcagcaagcacagttagcagctgctgagaaa
ttcaaagttcaaggtgaagctgtttcaaacattcaagaaaatacacagactccaactgta
caagaagaaagtgaagaggaagaggttgatgaaacaggtgtggaagttaaggatatagaa
ttggtcatgtcacaagcaaatgtgtcaagagcaaaggcggtccgagccctgaagaacaac
agtaatgatattgtaaatgctataatggaattaacaatgtaa
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integrated database retrieval system
