Sciurus carolinensis (gray squirrel): 124982607
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Entry
124982607 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat serine/threonine-protein kinase 2-like
KO
K08844
leucine-rich repeat kinase 2 [EC:
2.7.11.1
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar05012
Parkinson disease
ncar05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
124982607
05022 Pathways of neurodegeneration - multiple diseases
124982607
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ncar01001
]
124982607
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124982607
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124982607
Enzymes [BR:
ncar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
124982607
Protein kinases [BR:
ncar01001
]
Serine/threonine kinases: TKL group
LRRK family
124982607
Membrane trafficking [BR:
ncar04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
124982607
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124982607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_LRRK2
Beta-prop_LRRK2
ANK_LRRK2
Pkinase
PK_Tyr_Ser-Thr
Roc
LRR_8
COR
LRR_4
Ras
LRR_14
LRR_9
WD40_CDC20-Fz
Beta-prop_RSE1_2nd
Beta-prop_EML_2
Arf
LRR_13
LRR_6
WDR55
nSTAND3
Ank_2
T2SSE
LRR_NXF1-5
AAA_22
WD40_like
MMR_HSR1
TrwB_AAD_bind
GTP_EFTU
AAA_7
ABC_tran
G-alpha
Beta-prop_RIG_2nd
AAA_16
PduV-EutP
NACHT
Kdo
cobW
ARM_CUL7_CUL9
MobB
Septin
FtsK_SpoIIIE
AAA_29
WD40_Prp19
TniB
ResIII
AAA_23
Arm
Motif
Other DBs
NCBI-GeneID:
124982607
NCBI-ProteinID:
XP_047405479
LinkDB
All DBs
Position
4:101198044..101335894
Genome browser
AA seq
2524 aa
AA seq
DB search
MASGSCQGCEEDEETLKKLIVRLNNVQEGKQIETLVQILEDMLVFTYSDHASKLFEGKNX
HVPLLIVLDSYMRVASVQQVGWSLLCKLIEVCPETMQSLMGPQDIGNDWEVLGVHQLILK
MLTVHNASVNLSTIGLKALDLLLTSGKITLLILDEESDIFLLIFDAMRTFSANDEVQKLG
CKALHVLFERVSEEQLTEFVENKEYMILLNALKNFKDEEEIVLHVLHCLHSLAIPCNNVE
VLMSGNVRCYNIVVEAMKAFPVNEKIQEVSCCLLYRLTLGNFFNILVLNEVHEFVVKAVQ
QYPENATLQISALSCLALLTETIFLNQDLEEKNPENDEEEGEDKLFWLEACYRALTWHRK
NKHVQEAACWALNNLLMYQNSLHEKIGDEDGQFPAHREVMLSMLMHSSSKEVFQASANAL
STLLEQNVNFRKILLSKGIYLNVLELMQRHIHSPEVAESGCKMLNHLFEGSNTSLDTMAA
VVPKIITVMQSHETSLSVQLEALRAILHFIVPGMSEESSDESQHKLNMVKKLCFKNDIHK
LVLAALNRFIGNPGIQKCGLKVISSIAHFPDALGMLSLEGAIDSVLHTLQMYPDDQEIQC
LGLSLIGCLITKKTLSIGTGHLLAKILVSSLQRFKDVAEVQIKGFQTILAIFELSVSFPK
LLVLHSFDSVIFHQMSSNIMEQKDPQFLNLCCKCFAKLAMDDELKSVMLERACDQNNSIM
VECLLLLGADANQAKEATSLICQVCEKESSPKLVELLLSSGSREQDVRKALTISIGKGDS
QIISLLLRRLALDLANNSICLGGFCIGKIEPSWLGPLFPDKTSNLRKQTNIGSVLARMVL
RYQTKSTVEEGAASGSVGNFSEDVLDKFDEWTFIPDSSMDSVFGQSDDLDSEGSEGSFLV
KKKSNSISVGEFYRDPALLQRCSPNLQRHSNSLGPIFDHEELLRRKRKIFSSDDSLRSSK
LQSHMRHSDSISSLASEREYITSLDLSANELRDIDALSQKCCISGHLEHLEKLELHQNAL
TSFPQQLCETLKCLTHLDLHSNKFTSFPSYLLKMNCIVNLDVSRNDIGPLIVLDPAVKCP
TLKQFNLSYNQLSAAPENLSNVVEKLEQLILEGNKISGICSPMSLKELKTLNLSKNHISS
LPENFLEASPKVESFSARMNSLAAMPFLPSSITSLKLSQNKFTCIPDAILNLPHLRSLDM
SSNDIEYLPGPAHWKSLNLRELLFSYNQISILDLSEKAYTWSRVEKLHLSHNKLKEIPPE
IGCLENLTSLDVSYNLELRSFPNEMGKLSKIWDLPLDELHLNFDFKHIGCKAKDIIRFLQ
QRLKKAVPYNRMKLMIVGNTGSGKTTLLQQLMKTKKSDLGMQGATVGIDVKDWPIQIRGK
KKKDLILNVWDFAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARAS
SSPVILVGTHLDVSDEKQRKACISKITKELLNKRGFPAIRDYHFVNATEESDALAKLRKT
IINESLNFKIRDQPVVGQLIPDCYVELEKIILSERKNVPVEFPVIDRKRLLQLVKENQLQ
LDENELPHAVHFLNESGVLLHFQDPALQLSDLYFVEPKWLCKVMAQILTVKVEGCPKHPK
GIISRRDVEKFLSKKRRFPKNYMTQYFKLLEKFQIALPIGEEYLLVPSSLSDNRPVIELP
HCENSEIIIRLYEMPYFPMGFWSRLINRLLEISPYMLSGRERALRPNRMYWRQGIYLNWS
PEAYCLVGSEVLDNHSESFLKITVPSCRKGCILLGQVVDHIDSLMEEWFPGLLEIDICGE
GETLLKKWALYSFNDGEEHQKILLDDLMKKAEEGDLLVNPDQPRLTIPISQIAPDLILAD
LPRNIMLNNDELEFEQAPEFLLGDGSFGSVYRAVYEGEEVAVKIFNKHTSLRLLRQELVV
LCHLHHPSLISLLAAGIRPRMLVMELASKGSLDRLLQQDTASLTRTLQHRISLHVADGLR
YLHSAMIIYRDLKPHNVLLFTLYPNAAIIAKIADYGIAQYCCRMGIKTSEGTPGFRAPEV
ARGNVIYNQQADVYSFGLLLYDILTTGSRIVEGLKFPNEFDELAIQGKLPDPVKEYGCAP
WPMVEKLIKKCLKENPQERPTSAQVFDTLNSADLICLMRHILIPKNIIVECMVATNPNSK
NARIWLGCGHTDKGQLLFLDLNTEGLTSEEVTDSRILCLALVHLPAEKESWIVCGTQAGT
LLVINTEDGTKRHTLEKMTDAVTCLYCNSFSKQSKQKNFLLVGTADGNLVIFEDKAVKCK
GASPLKTLNIGNVSTPLMCLSESVNSSEKNIMWGGCGTKVFSFSNDFTVQKLIETRTNQL
FSYAAYSDSNIIAVAVDTALYIAKKNSPVVEVWDKKTEKLCELIDCVHFLKEVTVKINKE
SKHKMSYSGRVKTLCLQKNTALWIGTGGGHVLLLDLSTRRVIRIINNFCDSVRVMMAAQL
GSLKNVMLILGYKRKATEGIQQQKEIQSCLSVWDINLPHEVQNLEKHIEVRKELAEKMKR
TSVE
NT seq
7575 nt
NT seq
+upstream
nt +downstream
nt
atggctagtggcagctgtcagggctgcgaggaggacgaggaaactctgaagaagttgata
gtcaggctgaacaatgtccaagaaggcaaacagatagaaacgctggtccaaatcctggaa
gatatgctggtgttcacctactccgaccatgcctccaagttgtttgaaggcaaaaatntc
cacgtgcctctgttgatcgtcctggactcctatatgagagttgccagcgtgcagcaggtg
ggttggtcacttctatgcaaattaatagaagtctgtccagaaacaatgcagagcttaatg
ggaccccaggatattggaaatgattgggaagtccttggtgttcaccaactgattcttaaa
atgctaacagttcataatgccagtgtaaacctgtcaacaattggactgaaggccttagat
ctcctcctaacttcaggtaaaatcactttgctgatattggatgaagaaagcgatattttc
ttgttgatttttgatgccatgcgcacattttcagccaatgatgaagtccagaaacttgga
tgcaaagctttacatgtgctgtttgaaagagtttctgaggaacaactcactgaatttgtt
gagaacaaagagtatatgatattgttaaatgcattaaaaaactttaaagatgaagaggaa
attgtgcttcatgtactacattgtttacattccctagcaattccttgcaataatgtagaa
gtcctcatgagtggcaatgtcaggtgttacaatattgtggtggaagccatgaaagcattc
cctgttaatgaaaaaattcaagaagtgagttgctgtttgctgtataggcttacattaggt
aatttttttaatatcctggtattaaatgaggtgcatgagtttgtggtgaaagctgtgcag
cagtatccagagaatgcaaccttacagatctcagcactcagctgcttagcacttctcacg
gagaccattttcttaaatcaagatttagaggaaaagaatccggagaatgatgaggaggag
ggagaagataaattgttctggctggaagcctgttaccgagccttaacatggcataggaag
aacaagcatgtgcaggaggccgcatgctgggcactgaataatctccttatgtaccaaaac
agtttacatgagaagattggagatgaagatggccagttcccagctcatagggaagtgatg
ctgtccatgctgatgcattcttcatcaaaagaagttttccaggcatctgcaaatgcattg
tcaactctcttagaacaaaatgttaattttagaaaaattctgttgtcaaaaggaatatac
ttgaatgttttggagttaatgcagaggcatatacattctccagaagtggctgaaagtggc
tgtaaaatgctaaatcatctttttgaaggaagtaacacgtccctggatacaatggcagca
gtggttcccaaaataataacagttatgcaaagtcatgagacgtctttatcagtgcagctg
gaggcacttcgagctattttacattttatagtaccaggcatgtcagaagaatccagtgat
gaatctcagcataagctaaatatggttaaaaaactgtgtttcaagaatgatattcacaaa
ctggtcctagcagctttgaacaggttcattggaaaccctgggattcagaaatgtggctta
aaagtaatttcttctatagcacattttcctgatgcattggggatgttatccttggaaggt
gctattgattcagtgcttcacacactgcagatgtatccagatgaccaagaaattcagtgt
ctgggtttaagtcttataggatgcttgattacaaagaagaccttaagcataggaacgggg
catctgctggcaaaaattctggtttccagtttacaacgatttaaagatgttgctgaagta
cagattaaaggatttcagacgatcttggcaatatttgaattgtcagtatcctttcccaag
ctgctggtgcttcattcatttgattcagtaatattccatcagatgtcttccaatatcatg
gaacaaaaggatccacagtttctaaacctctgttgtaaatgctttgcaaaattagctatg
gatgatgaattaaaaagtgtgatgctagagagagcatgtgatcagaataatagcatcatg
gttgaatgcttgcttctgttgggagctgacgccaatcaagcaaaggaagcaacttcctta
atttgtcaggtatgtgagaaagagagcagtcccaaattggtggaactgctactgagcagt
ggatcacgtgagcaggatgtgcgaaaagcgctgaccataagtattgggaaaggtgacagc
cagatcatcagcttgctcctgaggaggctcgctctggatctggccaacaacagcatttgc
cttggaggattctgcatagggaaaattgaaccttcttggcttggtcctttatttccagat
aaaacatctaatttaaggaaacaaacaaatataggatctgtactagcgagaatggtgctc
aggtatcagacgaaaagtactgtggaagaaggagcagcttcaggcagtgttggaaatttt
tctgaagatgtacttgataaatttgatgaatggacctttattccagattcttctatggac
agtgtgtttggtcaaagtgatgatctggatagtgaaggaagcgaaggttcatttcttgtg
aaaaagaaatcaaattcgattagtgtaggagaattttaccgtgatcctgccctgttgcag
cgttgctcaccaaatctgcaaagacattccaattcattgggacccatttttgatcatgaa
gaattattgaggcgaaaaagaaaaatattttcttctgatgattcactcagatcatcaaaa
cttcagtcccatatgaggcattcagacagcatttcttccctggcttctgagagagaatat
attacatcattagacctttcagcaaatgaactcagagatattgatgccctgagccagaaa
tgctgtataagtggccatttggagcatcttgaaaagctggagcttcaccagaatgcactc
acgagcttcccacagcagctatgtgaaactctgaagtgtttgacacatttggatttgcac
agtaataaatttacatcatttccttcttacttgttgaaaatgaattgtattgtcaacctt
gatgtctctcgcaatgacattggacccctgatagttttggatcctgcagtgaagtgtcca
actctgaagcagtttaacctgtcatataaccagctctctgctgctcctgagaacctctcg
aatgtggtggagaaacttgaacagctcattttagaaggaaataaaatttcagggatatgt
tcccctatgagcctgaaggaactaaagactttaaaccttagtaaaaaccacatttcgtct
ctaccagagaactttcttgaggcttctccgaaagtggagagtttcagtgccagaatgaat
tctctcgctgctatgcctttcttgccttcttctataacaagcttaaaattatctcaaaac
aaatttacatgtattccagatgcaattttaaacctaccacacttgcggtccttagatatg
agcagcaatgatattgaatatctgccaggtcctgcacactggaaatctttgaacttaagg
gaactcttatttagctataatcagatcagcatcttggacttgagtgagaaagcatacaca
tggtctagagtagagaaactacatctttctcataataaactgaaagagattcctcctgag
attggctgtcttgaaaatctgacatctcttgatgttagttacaacttggaactgagatct
tttcccaatgagatggggaaattaagcaaaatatgggatcttcctttggatgaattgcat
cttaattttgattttaaacatataggatgtaaagccaaagacatcataaggtttcttcaa
cagcggttgaaaaaggctgtgccctataaccgaatgaaacttatgattgtaggaaacact
gggagtggtaaaaccacgttattgcagcaactgatgaaaaccaagaaatcagatcttgga
atgcagggagccacggttggcatagacgtaaaagattggcctattcaaataagaggcaaa
aagaagaaagacctcattctaaatgtttgggattttgcaggtcgtgaggaattctacagc
actcatccccatttcatgacccagcgggcattgtatcttgctgtctatgacctcagcaag
gggcaggctgaagtggatgccatgaagccctggctcttcaacataaaggctcgggcttct
tcatcccctgtgattcttgttggcacgcatttggatgtttctgatgagaaacagcgcaaa
gcctgcataagcaaaatcactaaggagctcttgaataagcgaggtttccctgcaatacga
gattaccacttcgtgaatgccactgaagagtctgatgctttggcaaaacttcggaaaacc
atcataaatgagagtcttaatttcaagattcgagatcagcctgtcgttgggcagctaatt
ccagactgctacgtagaacttgagaaaatcattttatcggagcgtaaaaatgtgccagtt
gaatttcctgtgattgaccggaaacgattattacaactagtgaaagaaaatcagctgcag
ttagatgaaaatgagcttcctcatgcagttcacttcctaaatgaatcaggagtccttctt
cattttcaagatccagcactgcagttaagtgacttatattttgtggaacccaagtggctt
tgtaaagtcatggcccagattttgacagtaaaagtggaaggctgtccaaaacatcctaag
ggaattatttcacgtagagatgtggaaaaatttctttcaaagaagaggcgatttccgaag
aactacatgacacagtattttaaactcctagaaaaattccagattgctttgccaatagga
gaagaatatttgctggttccaagcagtttgtcagacaacagacctgtgatagagcttccc
cattgtgagaactcagaaattatcattcgactgtatgaaatgccttattttccaatggga
ttttggtcaagattaatcaaccgattacttgaaatttcaccttacatgctttcaggaaga
gagcgagcacttcgcccaaacagaatgtactggcgacaaggcatctatttgaattggtct
cctgaagcttactgtctggtaggatctgaagtcttagacaatcactcagagagcttctta
aaaattacagttccttcttgtagaaaaggctgtattcttttggggcaagttgtggaccac
attgattctctcatggaagaatggtttcctggattgctggagattgatatttgtggtgaa
ggagaaactctcttgaagaaatgggcattatatagttttaatgatggtgaagaacatcaa
aaaatcttacttgatgacttgatgaagaaagcagaagaaggagacctcctagtaaatcca
gatcaaccacggctcaccattccaatatctcagattgctcctgacttgattctggctgac
ctgcctagaaatattatgttaaataatgatgagttggaatttgaacaagctccagagttt
ctgttaggtgacggcagttttggatctgtttatcgagcagtctatgaaggagaggaagtg
gctgtgaagatttttaataaacatacatcacttaggctgttacgacaagagctggtggtg
ctttgtcacctccaccaccccagcttgatatctttgctggcagctgggattcgtcctcgg
atgttggtgatggagctagcttccaagggttccttggatcgtctgcttcagcaagacaca
gccagcctcaccaggaccctccagcacaggatttcactgcatgtggctgatggcttgaga
tatctgcactcagccatgatcatataccgtgacttgaagccccataacgtactgcttttt
accctgtatcccaatgctgccatcattgcgaagattgctgactatgggatcgctcagtac
tgctgtagaatggggataaaaacatcagagggcacaccagggtttcgtgcacctgaagtt
gccagaggaaatgtcatttataaccaacaggctgacgtttattcatttggtttgctactc
tatgacattttgacaactggtagtagaatagtagagggattaaagtttccaaatgagttt
gatgaattagcaatacaaggaaaattacctgatccagttaaagaatatggttgtgcccca
tggcctatggttgagaagttaattaaaaagtgtttgaaagaaaatcctcaagaaaggcct
acttctgcccaggtctttgacactttgaattcagctgatttaatctgtctgatgagacac
attttaatacccaaaaacattattgttgaatgcatggtcgctacaaatcctaacagcaag
aatgcacgcatttggcttggctgtgggcacactgacaaaggtcagctcttgtttcttgac
ttaaacaccgaaggactcacctctgaggaagtaactgatagtagaatactgtgcttggcc
ctggtgcatcttcctgcggaaaaagaaagctggattgtgtgtgggactcaggctggtact
ctcctagtcatcaatactgaagacgggacgaagagacacacccttgaaaagatgactgat
gccgttacctgtttgtattgcaattccttttccaagcaaagcaagcaaaagaattttctt
ttggtgggaactgctgatggcaatttagtgatttttgaagataaggctgttaagtgtaaa
ggagcttctcctttgaagacactaaatatagggaatgtcagcactccactgatgtgtttg
agtgaatccgtgaattcatctgaaaagaacatcatgtggggaggatgtggcacaaaggtt
ttctctttttctaatgatttcactgttcagaaactcattgagacaaggacaaatcagctg
ttttcttatgcagcttacagtgattctaatatcatagcagtggcagtagacacagctctc
tatattgctaagaaaaatagccctgttgtggaagtgtgggataagaaaactgaaaaactc
tgtgaactcatagactgtgtacactttttaaaggaggtaacggtaaaaataaacaaggaa
tcaaagcacaaaatgtcttattctgggagagtgaaaactctttgccttcagaagaacact
gctctctggataggaactggaggaggccatgttttactccttgatctttcgactcgtcga
gttatacgcataattaacaacttttgtgattctgttagagtcatgatggcagcacagtta
ggaagccttaaaaatgtcatgctgattttggggtacaaacggaaagctactgaaggtata
caacaacaaaaagagatacaatcttgcttgtctgtttgggacatcaatcttccacatgaa
gtgcaaaatttagaaaagcacattgaagtgagaaaagaattagcagaaaaaatgaaaaga
acgtctgttgaataa
DBGET
integrated database retrieval system
