Sciurus carolinensis (gray squirrel): 124982631
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Entry
124982631 CDS
T08117
Name
(RefSeq) protein O-mannosyl-transferase TMTC2 isoform X1
KO
K23424
protein O-mannosyl-transferase [EC:2.4.1.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncar01003
]
124982631
Glycosyltransferases [BR:
ncar01003
]
O-Glycan biosynthesis
O-linked Man type
124982631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TMTC_DUF1736
TPR_16
TPR_12
TPR_11
TPR_17
TPR_7
TPR_10
TPR_19
TPR_14
TPR_CcmH_CycH
TPR_6
TPR_4
TPR_Slam
TPR_9
NatA_aux_su
TPR_MalT
TPR_3
TPR_21
ANAPC3
TPR_NPHP3
FAT
PMT_2
RPN7
PMT
TPR_15
ARM_TT21
HAT_Syf1_CNRKL1_C
ARM_TT21_4th
DUF2225
Motif
Other DBs
NCBI-GeneID:
124982631
NCBI-ProteinID:
XP_047405544
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All DBs
Position
4:140249260..140629164
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AA seq
836 aa
AA seq
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MIAELVSSALGLALYLNTLSADFCYDDSRAIKTNQDLLPETPWTHIFYNDFWGTLLTHSG
SHKSYRPLCTLSFRLNHAIGGLNPWSYHLVNVLLHAAVTGLFTSFSKILLGDGYWTFMAG
LMFASHPIHTEAVAGIVGRADVGASLFFLLSLLCYIKHCSTRGCSASTWGWFLGTGLCAG
CSMLWKEQGVTVLAVSAVYDVFVFHRLKMKQILPAIYKRKNLSLFLSISLLTFWGTSLLG
ARLYWMGNKPPSFSNSDNPAADSDSLLARTLTFFYLPTKNLWLLLCPDTLSFDWSMDAVP
LLKTICDWRNLHTVAFYTGLLLLAYYGLKSPSIERECNGKAVTNGKQNANGHSCHSDVEY
RNSEIKPSFASKVENGIKNNVSERTQLPSTENIVVLSLSLLIIPFIPATNLFFYVGFVIA
ERVLYIPSMGFCLLITVGARALYVKVQKRFLKSLIFYATATLIVFYGLKTAIRNGDWQNE
EMLYRSGIKVNPAKAWGNLGNVLKSQSKISEAESAYRNALYYRSNMADMLYNLGLLLQEN
SRFAEALHYYKLAIGSRPTLASAYLNTGIILMNQGKTEEARRTFLKCSEIPDENLKDPHA
HKSSVTSCLYNLGKLYHEQGRYEEALSVYKEAIQKMPRQFAPQSLYNMMGEAYMRLSKLP
EAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKFFLKAIELDPTKGNCYMHYGQF
LLEEARLIEAAEMAKKAAELDSTEFDVVFNAAHMLRQASLNEAAEKYYDLAARLRPNYPA
ALMNLGAILHLNGRLQKAEANYLRALQLKPDDVITQSNLRKLWNIMEKQGLKTSKT
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagagttggtgagcagcgctctggggctcgccttgtatctcaacactctgagt
gcggatttctgctatgatgacagccgtgctatcaagactaatcaggaccttctcccagaa
actccatggacccacattttctacaatgatttttgggggactcttctgactcacagtggc
agccacaagtcctaccgaccactctgcactctttcttttcgtctgaaccatgccattgga
gggttgaatccctggagctaccaccttgtcaatgtcctgttgcatgcggctgtcactggt
ctcttcacaagcttctctaagatcctccttggcgatggatactggaccttcatggctggc
ttgatgttcgcctcccaccccattcacacggaggcggtggctggaatcgtgggacgggcc
gatgttggggccagtctcttctttctcctctccttgctctgctacattaaacactgttct
acgagaggctgctcagccagcacttggggctggttcctggggacaggactgtgcgcagga
tgcagcatgttgtggaaggaacaaggagtgactgttctcgcggtttcagcagtttatgat
gtctttgtctttcacaggctgaaaatgaaacagatcctacctgccatttacaaaaggaag
aacttgtctctctttctcagcattagtttgttaactttctggggaacctcccttttgggg
gcccgcttatactggatgggaaacaaaccaccaagcttttccaactctgacaacccggct
gctgattccgatagcctgctggctcgcacgctcaccttcttctatttaccaaccaagaac
ctctggttgttgctatgcccagatactctcagttttgactggtcaatggatgctgtgcct
ctgctcaaaacaatttgtgattggagaaacctacacactgtggccttctataccggactc
ctcctcctcgcctactatggattgaagagcccaagcatagagagagaatgcaatgggaaa
gctgtaacaaatggcaagcagaatgcaaacggacacagctgccattcagacgtggagtac
cggaactcagagattaagcccagctttgcatccaaagtagaaaatggcattaaaaataat
gtatcagagagaactcagctcccttctacagagaacattgttgttctgtctttatctttg
ttgataataccctttattcctgccacaaacttgtttttctatgttggctttgtaattgca
gagcgagtattatatattcctagtatgggcttctgcctcctgattacagtgggtgccaga
gccctttatgtcaaagtccaaaagcggtttctcaagagcttgattttttatgctacagct
acattaattgttttctatggactcaagactgcgatcaggaatggagactggcagaatgag
gaaatgctgtataggtcagggataaaagtaaacccagctaaagcgtggggtaaccttgga
aatgttctgaagagtcagagcaaaatttctgaagctgaaagcgcctatagaaatgctttg
tactaccgcagcaacatggctgacatgctttataatttagggttacttctacaggagaac
agcaggtttgcagaagcccttcattattataaattggccattgggagccggcccaccttg
gcttctgcctacttaaacaccggcattattctaatgaatcaaggaaagacagaagaagcc
cggcgtacattcctaaagtgttctgagatccccgatgaaaacctgaaggaccctcatgca
cacaagagctctgttaccagctgtctgtacaacctgggaaagctctatcatgagcaggga
cgttacgaggaagccctgagtgtatacaaggaagcaattcagaaaatgccaaggcagttt
gccccacagagcttgtacaatatgatgggtgaagcatatatgcgattaagcaagctccca
gaagcagagcattggtatatggaatcattgagatccaagactgaccacatccctgcccat
ctcacctatgggaaactgctagctctaacaggtcgaaagagtgaggctgaaaagttcttc
ttgaaggctatcgagctggatcccaccaaaggaaactgttacatgcattatggtcaattt
cttctagaagaagctcgcctcatagaagcagcagagatggcaaaaaaagcagccgagctg
gatagtacagagtttgatgttgtcttcaatgctgcccacatgctcagacaggcaagcctg
aatgaagcagctgagaagtattatgatctggcagccaggctgaggccaaattatccggct
gctctgatgaacttgggagctattctgcaccttaatggcagactccagaaggctgaggcc
aactacttacgggctctacagctcaagccggatgatgtcatcacacagtccaatctccga
aaattgtggaacataatggaaaaacaaggtttaaagacttccaagacctga
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