Sciurus carolinensis (gray squirrel): 124982689
Help
Entry
124982689 CDS
T08117
Name
(RefSeq) neurogenic locus notch homolog protein 2 isoform X1
KO
K20994
Notch 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar01522
Endocrine resistance
ncar04330
Notch signaling pathway
ncar04658
Th1 and Th2 cell differentiation
ncar04919
Thyroid hormone signaling pathway
ncar05165
Human papillomavirus infection
ncar05200
Pathways in cancer
ncar05206
MicroRNAs in cancer
ncar05207
Chemical carcinogenesis - receptor activation
ncar05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124982689
09150 Organismal Systems
09151 Immune system
04658 Th1 and Th2 cell differentiation
124982689
09152 Endocrine system
04919 Thyroid hormone signaling pathway
124982689
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124982689
05206 MicroRNAs in cancer
124982689
05207 Chemical carcinogenesis - receptor activation
124982689
09162 Cancer: specific types
05224 Breast cancer
124982689
09172 Infectious disease: viral
05165 Human papillomavirus infection
124982689
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
124982689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
NOD
Notch
NODP
Ank_5
Ank_3
Ank_4
EGF_3
EGF_Teneurin
Elf-1_N
Motif
Other DBs
NCBI-GeneID:
124982689
NCBI-ProteinID:
XP_047405619
LinkDB
All DBs
Position
1:complement(101463997..101623044)
Genome browser
AA seq
2471 aa
AA seq
DB search
MPALRSAPLWALLALWLCRAAPARALQCRDGYEPCVNEGICVTYHNGTGYCKCPEGFLGE
YCQHRNPCEKNRCQNGGTCVAQAMLGKATCRCAPGFTGEDCQYSTSHPCFVSRPCLNGGT
CHMLSRDTYECTCQVGFTGKLCQWTDACLSHPCANGSTCTTVANQFSCRCLTGFTGQKCE
TDVNECDIPGRCQHGGTCLNLPGSYQCQCPQGFTGQHCDSPYVPCAPSPCVNGGTCRQTG
DFTFECNCLPGFEGSTCERNIDDCPNHKCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVD
ECLLQPNACQNGGTCTNRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASF
ACMCPEGKAGLLCHLDDACISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECA
MANSNPCEHAGKCVNTDGSFHCECLKGYGGPRCEMDINECHSDPCQNDATCLDKIGGFTC
LCMPGFKGVHCELEINECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTP
CLNGAKCIDHPNGYECQCATGFTGVLCEENIDNCDPDPCHHGQCQDGIDSYTCICNPGYM
GAICSDQIDECYSSPCLNDGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASNPCVHGACM
DGINRYSCVCLPGFTGQRCNIDIDECASNPCRKGATCINDVNGFRCMCPEGPHHPSCYSQ
VNECLSSPCIHGNCTGGLTGYKCLCDAGWIGINCEVDKNECLSNPCQNGGTCDNLVNGYR
CTCKKGFKGHNCQVNIDECASNPCLNQGTCFDDVSGYTCHCVLPYTGKNCQTVLAPCSPN
PCENAAVCKEAPNFESYTCLCAPGWQGQRCTIDIDECVSKPCMNHGLCHNTQGSYMCECP
PGFSGMDCEEDIDDCLANPCQNGGSCVDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKN
GGTCSDYVNSYTCKCQAGFDGVHCENNIDECTESSCFNGGTCVDGINSFSCLCPVGFTGP
FCLHEINECNSHPCLNEGTCVDGLGTYRCTCPLGYTGKNCQTLVNLCSHSPCKNKGTCVQ
EKAESRCLCPSGWTGAYCDVPNVSCKLAAAHKAVPVEHLCQHSGVCIDAGNTHHCQCPLG
YTGSYCEKQLDECTSNPCQHGATCIDFLGGYRCECVPGYQGVNCEYEVDECQNQPCQNGG
TCIDLVNHFKCSCPPGTRGLLCEENIDDCAGGPHCLNGGQCVDRIGGYSCHCLPGFAGER
CEGDINECLSNPCNSEGSLDCIQLTNDYLCVCRSAFTGRHCETFVDVCPQMPCLNGGTCA
VASNVPDGFICRCPPGFSGARCQSSCGQVKCRKGEQCVHTASGPRCFCPNPQDCESGCAS
SPCQHGGSCYPQRQPPYYSCHCSPPFWGSHCELYTAPTSTPPATCLSQYCADKARDGVCD
EACNSHACQWDGGDCSLTMENPWANCSSPLPCWDYINNQCDELCNTAECLFDNFECQGNS
KTCKYDKYCADHFKDNHCDQGCNSEECGWDGLDCAADQPENLAEGTLVIVVLMPPEQLLQ
DARSFLRALGTLLHTNLRIKRDSQGALMVYPYYGEKSAAMKKQRMTRRSLPEEQEQEVAG
SKVFLEIDNRQCVQDSDQCFKNTDAAAALLASHAIQGTLSYPLVSVVSESRFPRRTQLLY
LLAVAVVIILFIILLGVIMAKRKRKHGSLWLPEGFTLRRDSSNHKRREPVGQDAVGLKNL
SVQVSEANLIGSGTSEHWMDDEGPQPKKAKAEDEALLSEEDDPIDRRPWTQQHLEAADIR
RTPSLALTPPQAEQEVDVLDVNVRGPDGCTPLMLASLRGGSSDLSDEDEDAEDSSANIIT
DLVCQGASLQAQTDRTGEMALHLAARYSRADAAKRLLDAGADANAQDNMGRCPLHAAVAA
DAQGVFQILIRNRVTDLDARMNDGTTPLILAARLAVEGMVAELINCQADVNAVDDHGKSA
LHWAAAVNNVEATLLLLKNGANRDMQDNKEETPLFLAAREGSYEAAKILLDHFANRDITD
HMDRLPRDVARDRMHHDIVRLLDEYNVTPSPPGTVLTSALSPVICGPNRSFLSLKHTPMG
KKPRRPNAKSTMPTSLPNLAKEAKEAKGSRRKKSLSEKVQLSESSVTLSPVDSLESPHTY
VSDTTSSPMITSPGILQASPNPMLATAAPTAPVHAQHALSFSNLHDMQPLAPGASTVLPS
VSQLLSHHHIVPPGSGSAGSLGRLHPVSVPADWMNRVEMNETQYNEMFGMVLAPAEGTHP
GVAPQSRPPEGKHITTPREPLPPIVTFQLIPKGSIAQSAGAPQPQSNCPPAVAGSLPTMY
QIPEMARLPSVTFPTAMMPQQDGQVAQTILPAYHPFPASVGKYPTPPSQHSYTSSSAAER
TPSHSGHLQGEHPYLTPSPESPDQWSSSSPHSASDWSDVTTSPTPGGAGGVQRGPGTHMS
EPPHSNMQVYA
NT seq
7416 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccctgcgctccgctccgctgtgggcgctgctggcgctgtggctgtgccgcgcg
gccccggcgcgtgcattgcagtgtcgagatggctatgagccctgtgtaaatgaaggaatt
tgtgttacttaccacaatggcacaggctattgcaaatgtccagagggcttcctgggagaa
tattgtcaacatcgaaatccctgtgagaagaaccgctgccagaatggtggcacctgcgtg
gcccaggccatgttggggaaagccacctgccgatgtgctccagggttcacaggcgaggac
tgccaatactccacctctcacccctgctttgtgtctcgcccctgcctgaacggaggcacc
tgccacatgctcagccgggatacctatgaatgtacctgtcaagttggttttacagggaag
ctgtgccaatggactgatgcctgcctgtctcatccatgtgcaaatggaagtacctgtacc
actgtagccaaccagttctcctgcagatgtctcacaggcttcacaggccagaagtgtgag
actgatgtcaacgaatgtgacattccaggacgctgccagcatggtggcacctgcctcaac
ctacccggttcctatcagtgtcagtgtccccagggcttcacaggccaacattgtgacagc
ccctatgtgccctgtgcaccttccccctgtgtcaatggaggcacctgccggcagactggt
gacttcacttttgagtgcaactgccttccaggttttgaaggcagcacctgtgagcggaat
attgatgactgtcctaaccacaagtgtcagaatggaggggtttgtgtggatggggtcaat
acatacaactgccgctgcccgcctcagtggacaggacagttctgcacagaggatgtggat
gagtgcctgctgcaacccaatgcctgtcagaacggaggcacctgcactaaccgcaatggt
ggctatggctgtgtgtgtgtgaatggctggagtggagatgactgcagtgagaacatcgac
gactgtgccttcgcctcctgcactccaggctccacctgcattgaccgtgtggcctccttc
gcttgcatgtgtccagagggaaaggcaggtctcttgtgtcatctggatgatgcctgcatc
agcaacccttgccacaagggggcgctgtgtgacaccaacccgctgaatgggcagtacatc
tgcacctgcccacagggctacaaaggggcagactgcacagaagatgtggatgagtgcgcc
atggccaatagcaatccttgtgagcacgcaggcaagtgtgtgaacacggatggcagcttc
cactgcgagtgtctcaagggctatgggggacctcgctgtgagatggacatcaacgagtgt
cattcagacccctgccagaacgatgctacctgcctggataagattggaggcttcacctgc
ctgtgcatgccaggcttcaaaggtgtgcattgtgaactggagatcaacgaatgtcagagc
aacccttgtgtgaacaatgggcagtgtgtggacaaagtcaaccgcttccagtgtctgtgt
ccccctggtttcacggggccagtgtgccagattgacatcgacgactgttccagtactccg
tgtctgaatggggccaagtgtatcgatcacccaaatggctatgaatgccagtgtgccaca
ggtttcactggtgtgttgtgtgaggaaaacatcgacaactgtgaccctgatccttgccac
catggccaatgccaggatggtattgattcctacacttgcatctgcaatcccgggtacatg
ggtgccatctgcagtgaccaaattgatgagtgttatagcagcccttgcttgaatgatggg
cgctgcatcgacctggtgaatggctaccagtgcaactgccagccgggcacatcaggagtt
aattgtgaaatcaattttgatgactgtgctagcaacccttgtgtccacggagcttgtatg
gatggcatcaatcgttacagttgtgtctgcttgccaggattcacagggcagagatgtaac
attgacatcgatgagtgtgcctccaatccctgtcgcaagggtgcaacgtgcatcaacgat
gtgaatgggttccgctgcatgtgtccagagggtccccatcatcctagctgctactctcag
gtgaatgagtgcctgagcagtccctgcatccacggcaattgtaccgggggccttactgga
tataagtgcctctgtgatgcaggttggattggcatcaactgtgaagtggacaaaaatgaa
tgtctttctaacccatgccagaatggaggaacttgtgacaatctggtgaatggatacagg
tgtacttgcaagaagggctttaaaggtcacaactgccaggtgaatattgatgagtgtgct
tcaaatccttgtctgaaccaggggacctgctttgatgatgttagtggctatacttgccac
tgtgtgctgccctacacaggcaaaaattgtcaaaccgtgttggctccctgttctccaaac
ccttgtgagaatgctgctgtttgtaaagaggcaccgaattttgagagttatacctgcttg
tgtgctcctggctggcaaggtcagcggtgtacgattgacattgatgagtgtgtctccaag
ccctgcatgaaccatggtctctgtcataatacccagggcagctacatgtgcgagtgtcct
ccagggttcagtggtatggactgtgaggaggacatcgatgactgccttgctaatccttgc
cagaatggaggttcctgtgtggatggagtaaacactttctcctgtctctgccttcctggc
tttactggggataagtgccagacagacatgaatgagtgtctgagtgaaccctgtaagaat
ggagggacctgctctgactatgtcaacagttacacctgcaagtgccaagcaggattcgat
ggagtccactgtgagaataacatcgatgaatgcactgaaagctcttgcttcaatggtggt
acatgtgttgatggaattaactccttctcctgtttgtgtcctgtgggcttcactggtccc
ttctgcctccacgagatcaatgaatgcaattctcatccgtgtctgaatgagggaacatgt
gtcgatggtctgggtacctaccgctgcacctgtcccttgggctacactgggaaaaactgt
cagaccttggtgaacctctgcagtcattcaccatgtaaaaacaaaggtacttgtgttcag
gaaaaggcagagtctcggtgcctgtgcccatctgggtggacgggtgcttactgtgatgtg
cccaatgtctcctgtaagttggcagctgcccacaaagctgtgcctgttgagcacttgtgc
cagcactcgggtgtctgtattgacgctggcaacacgcatcactgccagtgcccgctgggc
tacactgggagctactgtgagaagcagcttgatgagtgtacatccaatccctgccagcat
ggtgccacctgcattgatttccttggaggatacagatgtgagtgtgttccaggatatcag
ggtgtcaactgtgagtatgaagtggatgagtgccagaatcagccatgccagaatggaggt
acctgcatcgaccttgtgaaccatttcaagtgctcatgcccaccaggcactcggggccta
ctttgtgaagagaacattgatgactgtgctggaggtccccattgccttaatggtggtcag
tgtgtggacaggattggagggtacagttgtcattgcttgcctggctttgctggggagcgg
tgtgaaggggacatcaacgagtgcctctccaacccctgcaactctgagggcagcctggac
tgcatccaacttaccaatgactatctgtgtgtctgccgcagtgccttcactggccgtcac
tgtgaaaccttcgtggacgtgtgtccccagatgccttgcttgaatggagggacttgtgct
gtggccagcaatgtgcccgatggcttcatttgtcgttgtcccccaggcttctccggggcg
agatgccagagcagctgtggacaggtgaagtgtagaaaaggagagcagtgtgtacacacc
gcctcgggaccccgctgcttctgccccaatccccaggactgtgagtcaggctgtgccagc
agcccctgccagcacgggggcagctgctaccctcagcgccagcctccttattactcttgc
cactgctctccaccgttctggggcagccactgtgaactctacacggcccccaccagcacc
cctcctgccacctgtctgagtcagtactgtgctgacaaagctcgggacggcgtctgcgat
gaggcctgcaacagccacgcctgccagtgggatggaggtgactgttccctcaccatggag
aacccctgggccaactgctcctccccacttccctgctgggactacatcaacaaccagtgt
gatgagctgtgcaacacggccgagtgcctatttgacaacttcgaatgccaggggaacagc
aagacgtgcaagtatgataagtactgtgcagaccactttaaagacaaccactgtgaccag
ggatgcaacagtgaggagtgtggctgggatggactggactgtgctgctgaccagcctgag
aacctggcggagggtactctggtcattgtggtattgatgccccccgaacaactgctccag
gatgcccgcagcttcttgcgggcactgggcaccctgctgcacaccaatctgcgcattaaa
cgggactcacagggggccctcatggtgtacccctattatggtgagaaatcagctgccatg
aagaagcagaggatgactcgcaggtctcttcctgaggagcaagaacaggaggtggctggc
tctaaggtgtttctggaaattgacaaccgccagtgtgttcaagactcggaccagtgcttc
aagaacacggatgcagcagcagctctgctggcttctcatgccattcaggggaccttgtcg
taccctctggtgtctgttgtcagtgaatctcggtttccaagacgcactcagctcctctat
ctgcttgctgttgctgttgtcattatcttgttcattatcttgctgggggtaatcatggca
aaacgaaagcgcaagcatggctccctgtggctgcctgaaggtttcaccctacggcgagac
tccagcaatcacaagcgtcgtgagccagtgggacaggatgctgtggggttgaaaaatctc
tcagtgcaagtgtcagaggctaatctaattggttctggaacaagtgaacattggatggat
gatgaaggaccccagccaaagaaagccaaggctgaagatgaggctttactctcagaagaa
gatgaccccattgatcgacgcccatggacacagcagcaccttgaagccgcagacattcgt
cgaacaccatcactggctctcactcctcctcaggctgagcaggaggtagatgtactggac
gtgaatgtccggggcccagatgggtgcaccccactgatgttggcttctctcagaggaggc
agctcagatttgagtgacgaagatgaagatgcagaggactcttctgccaacatcatcaca
gacttggtctgccagggtgccagcctccaggcccagacagaccggaccggggagatggcc
ctgcatcttgcagcccgctactcaagggctgacgctgccaagcgcctcctggatgcaggt
gcagatgccaatgcccaggacaacatgggccgctgtcctctccatgctgcagtggcagct
gatgcccaaggtgtcttccagattctgattcgcaaccgagtgaccgatctggatgccaga
atgaatgatggtactacacccctgattctggctgcccgcctggctgtggagggaatggtg
gcagaactgatcaactgccaagcagatgtgaatgcagtggatgaccatggaaaatctgct
cttcactgggcagctgctgtcaataatgtagaggcgacacttttgctgttgaaaaacggg
gccaaccgagacatgcaggacaacaaggaagagacacctctgtttcttgctgcccgggag
gggagctatgaagcagccaagatcctgttagaccattttgccaatcgtgacatcacagat
cacatggatcgtcttccccgagatgtggctcgtgatcgcatgcaccatgacattgtgcgc
ctcctggatgagtacaatgtgacaccgagccccccaggcactgtgctgacttctgctctc
tcacctgtcatctgtgggcccaacaggtctttcctcagtctgaagcacacaccgatgggc
aagaagcctagacgacccaatgctaagagtaccatgcccaccagcctccctaaccttgcc
aaggaggccaaggaagccaaggggagtaggaggaagaagtctctgagtgagaaggtccaa
ctctctgagagctcagtgactttatcccctgttgattctctagagtcacctcacacatat
gtctctgacaccacatcctctccaatgatcacatcccctggaatcttacaggcttcaccc
aaccctatgctggctactgctgcccccactgccccagtccatgctcagcatgcactgtct
ttctctaaccttcatgacatgcagcctttggctcctggggctagcactgtgcttccctcc
gtgagccagttgctgtcccaccaccatattgtgccccctggcagtggcagtgcaggaagt
ttgggtagactacatccagtctctgtcccagcagattggatgaaccgcgtggagatgaat
gagacccagtacaatgagatgtttggcatggtcctggctcctgctgaaggcacccaccct
ggtgtagctccccagagcaggccacctgaagggaagcatatcaccactccacgggagccc
ttaccccccattgtgactttccagctcatccccaaaggcagcattgcccagtccgctggg
gctccccagcctcagtccaactgccctccagctgttgcaggttccttacccactatgtac
cagattccagaaatggcccgtttgcccagtgtgactttccccactgccatgatgccgcag
caggatgggcaggtagctcagaccatcctcccagcctatcatcctttcccagcctctgta
ggcaagtatcccacacccccttcacagcatagttatacttcctcaagtgctgctgagcga
acacccagtcatagtggtcacctccagggtgaacatccctacctgacaccatccccagag
tctcctgaccagtggtcaagctcatcaccccactctgcttctgactggtcagatgtgacc
accagccctactcctgggggtgctggaggagttcagcggggaccagggacacacatgtct
gagccaccgcacagcaacatgcaggtttacgcatga
DBGET
integrated database retrieval system
