Sciurus carolinensis (gray squirrel): 124982731
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Entry
124982731 CDS
T08117
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04010
MAPK signaling pathway
ncar04260
Cardiac muscle contraction
ncar04261
Adrenergic signaling in cardiomyocytes
ncar04921
Oxytocin signaling pathway
ncar05410
Hypertrophic cardiomyopathy
ncar05412
Arrhythmogenic right ventricular cardiomyopathy
ncar05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124982731
09150 Organismal Systems
09152 Endocrine system
04921 Oxytocin signaling pathway
124982731
09153 Circulatory system
04260 Cardiac muscle contraction
124982731
04261 Adrenergic signaling in cardiomyocytes
124982731
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
124982731
05412 Arrhythmogenic right ventricular cardiomyopathy
124982731
05414 Dilated cardiomyopathy
124982731
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124982731
Ion channels [BR:
ncar04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124982731
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA_3
VWA
VWA_2
dCache_1
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
124982731
NCBI-ProteinID:
XP_047405640
EnsemblRapid:
ENSSCRG00010024594
LinkDB
All DBs
Position
4:complement(66784292..66883215)
Genome browser
AA seq
1120 aa
AA seq
DB search
MPGLPRFYPNPGSTHNQAPCYQQPGAWAFLRKTTVILWLLLSSTSLAPTWGQTKIPLETV
KLWAETFGRGLYDTVTKYSGSLLLQKKYKDVESSLKIEEVDGLELVRKFSEDMENMLRRK
VEAVKSLVEAAEEADLNHEFNASLVFDYYNSVLINERDENGDYVELGAEFVLESNAHFSN
LRVNTSISSVQLPTNVYNKDPDILNGVYMSEALNPVFVENFQRDPTLTWQYFGSSTGFFR
IYPGIKWTPDENGVITFDCRNRGWYIQAATSPKDIVILVDMSGSMKGLRMAIAKHTITTI
LDTLGENDFVNIIAYNDYVHYIEPCFKGILVQADRDNREHFKQLVDELAVKGVGIVDQAL
SEAFQILKKFQEARQGSVCNQAIMLITDGAVEGYEPVFEKYNWPDRKVRVFTYLIGREVS
FADRLKWIACNNKGYYTQISTLADAQENVMEYLHVLSRPMVINHDHDIIWTEAYMDSKLS
TSKAQSLMLLTTVAMPVFSKKNETRSHGILLGVVGSDVTLKELMKLAPRYKLGVHGYAFM
NTNNGYILSHPDLRPLYREGKKLKPKPNYNSVDLSEVEWEDQAEILRTAMINRETGSFTM
DVKVPLDKGKRVLFLTNDYFFTDISDTPFSLGVVLSQGHGEYVLLGNTSVEEGLHDLLHP
DLTVASDWIYCITDIDPDHRKLSQLEAMVRFLTGEDPDLECDEELVREVLFDAVVTAPME
AYWTALALNISDESEQGVDVAFLGTRAGLLRSSFFVGSEKVSDRMFLMPDDETSVFTMDN
FPLWYRQASEQPAGSFVFNLRWVEGPESPREPVAVTASTAVTVTVDKKTAIAAAVGIQMK
VEFLQRQFWAATEQCSAVGGPCPKSCGDSDLDCFVIDNNGFILISERSQETGRFLGEVDG
AVMTQLLNMGVFKQVTMYDYQAMCKLPDHHPSAAQPLVSPISALLMATRWLMSELLLFLL
EWSAWGSWHDRGAEAKTVFHHSHKHKKQDLLHPCDTEYPVFVHQTAIQETNGIIDCGGCQ
KIFVMQQIPKSNLLLLVTDPTCDCSVFPPVLQEATEVKYNASVKCDRMRSQKPRRRPDSC
HAFHPEENAQDCGGASDTTAWLPLFLLPLGAWVLPPQLLW
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcttacccaggttctacccaaaccctggctccacccacaaccaggccccctgc
tatcagcagccaggagcctgggccttcctgcggaagaccacagtcatcctgtggctgctg
ctgtccagcacctccctggcccccacatggggtcagaccaagattcctctggaaacagtg
aagctctgggcagaaaccttcggcaggggcttatatgacactgtgaccaaatattctggc
tccctcttgctgcagaagaaatacaaggatgtggagtccagtctgaagatcgaggaggtg
gatgggctggaactggtgaggaagttctcagaggacatggagaacatgttacggaggaag
gtcgaggctgtcaagagtctggtggaggctgctgaggaggctgacttgaaccatgaattc
aatgcatctctggtgtttgactactacaactcagtcttgatcaatgaaagggacgagaat
ggcgactacgtggagctgggagctgagtttgtccttgagtccaacgcacacttcagcaac
ctgcgggtgaacacctccatcagcagtgtgcagctgccaaccaatgtgtacaacaaagac
ccagatattttaaatggagtctacatgtctgaagccctgaaccctgtttttgtggagaat
tttcagagagaccctacactgacctggcagtattttggcagttcaactggattcttcagg
atctatccaggtataaaatggacaccggatgaaaatggagtcattaccttcgactgccga
aaccgtggctggtacatacaagctgccacttctcccaaggacatagtgatcttggtggac
atgagtggcagcatgaaggggctgaggatggctattgccaagcacaccatcaccaccatc
ttggacacccttggagagaatgactttgttaatatcattgcgtacaatgactacgtccat
tatatcgagccctgttttaaagggatccttgtccaggcggatcgagacaaccgagagcat
ttcaaacagctggtggacgagctggcggtcaaaggtgtggggattgtggatcaggccctg
agtgaggccttccagatcctgaagaagttccaagaggccagacaaggaagtgtctgcaat
caggccatcatgctgatcaccgatggggccgtggagggctatgagccagtgttcgagaag
tataactggccagaccgcaaggtccgagttttcacttacctcattggaagagaagtgtct
tttgctgaccgattgaagtggatcgcctgcaacaacaaaggctactacacacagatctcc
acgctggccgacgcccaggagaacgtgatggaatatctgcatgtgctcagccgccccatg
gtcattaaccatgaccacgacatcatctggactgaggcctacatggacagcaagctctct
acctcaaaggcacagagcctgatgcttctcacaaccgtggccatgcccgtcttcagtaaa
aagaatgaaacgaggtcccatggcattctcctgggtgtggtgggctctgatgtaaccctg
aaagagctgatgaagctggcacccaggtataagcttggagtacatggatatgcctttatg
aacactaacaatggctacattctctcacatcctgacctccggccattgtacagagagggg
aagaaattgaaacccaaacccaactacaatagcgtggatctctctgaagtggagtgggaa
gaccaagctgaaatcctgagaacggccatgatcaacagggagacaggttctttcactatg
gacgtgaaggttccactggacaaagggaagcgagttcttttcctgaccaatgactacttc
ttcacagacatcagtgacacacctttcagcttgggagtggtgctgtcccagggccacggg
gaatacgtcctcctggggaacacatctgtggaagaaggcctgcatgacttgcttcaccca
gatctgaccgtggccagcgactggatctactgcatcacggatattgatccagaccaccgg
aagctcagccagctggaggccatggtccgcttcttgaccggggaggatccagacctagag
tgtgatgaagagctggtgcgggaggtgctgtttgatgcagtggtgacagcccccatggaa
gcctactggacagcgctggctctcaacatctctgatgagtcagagcaaggagtggatgtg
gccttcctgggcacccgggctggcctccttagaagcagcttcttcgtgggctctgagaag
gtctccgacaggatgttcctgatgcctgatgatgagaccagtgtgttcactatggacaac
ttccctctgtggtatcgccaggcctctgagcagcctgctggtagctttgtcttcaacctg
cgctgggtagagggaccagaaagcccccgtgagccagtggcagttacggccagcacagct
gtaaccgtgacagtggacaagaagacagccattgctgcagcggtaggtatccaaatgaag
gtggaattcctccagcgccagttctgggcagccacggagcagtgcagtgctgtgggtggt
ccatgcccaaagagctgcggggacagcgacctggactgcttcgtcatagacaacaatggc
ttcattctgatctcggagaggtcacaggagacaggaagatttctgggggaggtggacggc
gcggtcatgacccagctgctcaacatgggggtgtttaagcaggtgactatgtatgactac
caggccatgtgcaagcttccggatcaccaccccagcgcagcccagcccctggtcagccca
atctctgcactcctgatggcgaccaggtggctgatgagtgagctcttactgttcctgttg
gagtggagtgcctggggctcctggcatgacagaggggcagaggccaaaaccgtcttccat
cactcccacaagcataagaagcaggacctgctgcatccctgtgacacagagtaccccgtg
tttgtgcaccagacagccatccaagagaccaacggcatcattgactgtgggggctgccag
aagatatttgtgatgcagcagattcccaagagcaacctgctcctgctggtgacagacccc
acctgtgactgcagcgtcttcccaccagttctgcaggaggccacagaagtcaaatataat
gcctctgtcaagtgtgacaggatgcgctcccaaaagccccgtcggagaccggattcctgc
cacgccttccatccagaggagaatgctcaggactgtggcggcgcctcggacacaacagcc
tggctccccctgttcctgctgcctctgggtgcctgggtgctgccgcctcagcttctgtgg
tga
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