Sciurus carolinensis (gray squirrel): 124982957
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Entry
124982957 CDS
T08117
Name
(RefSeq) zinc finger protein castor homolog 1 isoform X1
KO
K25209
zinc finger protein castor
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124982957
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124982957
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_CASZ1
zf-C2H2_CASZ1_1
VID28_C
Phage_YorO
Motif
Other DBs
NCBI-GeneID:
124982957
NCBI-ProteinID:
XP_047405759
LinkDB
All DBs
Position
1:201598583..201738489
Genome browser
AA seq
1876 aa
AA seq
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MKVDYLSEFGFRLSDYEFGTKERSMDLGTAEGTRCTDPPAGKPAMAAKRKGGLKLNAICA
KLSRQVVVEKGAEAGSQAEDSSLRPRDKERSGPESGVARAPRSEEDKRRAVIEKWVNGEY
SEEPALAPVLGRISREGLELPPEGVYMVQPQGCSDEEDHVEEPSKGGSGPEKDSDGAASK
DDSSPSVKQASGETSSLRDYAASTMTEFLGMFGYDDQNTRDELARKISFEKLHAGTTPEA
ATSSMLPTSEDNLSKRARFSKYEEYIRKLKAGEQLSWPAHGTKAEERTGKEVVGPLPGLR
LPSNTAHLETKATILPLPSHSSVQMQNLVARASKYDFFIQKLKTGENLRPQNGSTYKKPS
KYDLENVKYLHLFKPGEGSPDMGGAIAFKTGKVGRPSKYDVRGIQKPGPTKVPPTPSLAP
APLASVPTAPSAPGPGPEPPASLSFNTPEYLKSTFSKTDSITTGTVSTVKNGLPTDKPAV
TEDVNIYQKYIARFSGSQHCGHIHCAYQYREHYHCLDPECNYQRFTSKQDVIRHYNMHKK
RDNSLQHGFMRFSPLDDCSVYYHGCHLNGKSTHYHCMQVGCNKVYTSTSDVMTHENFHKK
NTQLINDGFQRFRATEDCGTADCQFYGQKTTHFHCRRPGCTFTFKNKCDIEKHKSYHIKD
DAYAKDGFKKFYKYEECRYEGCVYSKATNHFHCIRAGCGFTFTSTSQMTSHKRKHERRHV
RSSGVLGLPPSLLGAKDTEPEESSNDDLVDFSALSSKNSSLSASPTSQQSSASLATAAAT
TEAAPSATKPPSSKIPGLMPQGLPGSIPLALALSNSGLPTAAPYFPLLPGRGSTSLPVGA
PGLLGAMSSGAAASATPDTPALVASGAGDSALVTATSVPVPPASIMERISASKGLISPMM
ARLAAAALKPSATFDPGSGQQATPARFPPAQVKQEPGESAGPPGPLEASQDRSLDLTVKE
SSNESNGHAAPANSSLLSSLMNKMSQGNPSLGSLLNIKTEAEGSPAAESSPFLGKAVKAL
VQEKLSEPWKVYLRRFGTKDFCDAQCDFLHKAHFHCVVEECGALFSTLDGAIKHANFHFR
TEGGAAKGSAEASFPASAAETKPPLAASPPPAPPGTAVPGASLEGPAPSPASASVPSTPT
LLAWKQLASTIPQMPQIPASVPHLPASPLATTSLENAKPQVKPGFLQFQENDPCLATDCK
YANKFHFHCLFGNCKYVCKTSGKAESHCLDHINPNNSLVNVRDQFAYYSLQCLCPNQHCE
FRMRGHYHCLRTGCYFVTNITTKLPWHIKKHEKAERRAANGFKYFTKREECGRLGCKYNQ
VNSHFHCIREGCQFSFLLKHQMTSHARKHMRRVLGRNFDRVPPCQGAPSLVDAETDEGVD
YPGCSPGAASSESSTMDRSCSSTPVGNESTAAGCPAPPPPPLPPPAAAGDEAARGAAQPP
LAAPFPAGLRPPLPALPCLFSPSCLSHSLLSATLGAGRGLAHPISSPPSFPPVTATPTPV
KSDVPLVQDAAGNTISMPTASGAKKRFWIIEDMSPFGKRRKTASSRKMLDEGMMLEGFRR
FDLYEDCKDTACQFSLKVTHYHCTRENCGYKFCGRTHMYKHAQHHDRVDNLVLDDFKRFK
ASLSCHFADCPFSGTSTHFHCLRCRFRCTDSTKVTAHRKHHGKQDVISAAGFCQFSSSAD
CAVPDCKYKLKCSHFHCTYPGCRHTVVGMSQMDSHKRKHEKQERGEPPAASPGAPGSLDG
SLTLGAEPGGSLLFLQTAAAGLGLALGDAGDPGPPDAGAGPREAPAAPAAAAGAGESSQE
DEEEELELQEEAEDDEDDDEDEDDDEDDDEDDDDEDLRTDSEESLPEAAAEEAAGARTPA
LAALGAPGPAPAAASP
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgattatttaagtgaattcggctttcgactctccgactatgagtttgggacc
aaggagcggagcatggatctcggaacagctgaaggcacccggtgcaccgacccacctgca
ggcaagccagccatggcggccaagcgcaaaggcggcctgaagctcaatgccatctgcgcc
aagctgagccgccaggtggtggtggagaagggagcagaggctggttcccaggcggaggac
agctcgctgcggccccgggacaaagaacgcagtggccctgagtctggggtggcccgggcc
ccacgcagcgaagaagacaagaggcgtgcggtgattgagaagtgggtcaacggggagtat
agcgaggagccggcactggcacccgtgttggggcggatctcgcgcgagggcctggagctg
cctcccgagggtgtctacatggtccagccccagggctgcagtgacgaggaagaccacgtg
gaagagccctccaagggcggcagtggcccggagaaggactcggacggggcagcctcgaag
gacgacagcagccccagcgtcaaacaggcttcaggagagacctcctcactaagggactat
gccgcctccaccatgactgagttcctgggcatgttcggctatgacgaccagaacacgagg
gacgagctggccaggaagatcagctttgagaagctgcatgcgggcaccacccctgaggcg
gccacctcctccatgttgcccacctctgaggacaacctcagcaagcgggcacgcttctcc
aagtacgaggagtatatccgcaagctcaaggccggcgagcagctctcctggccagcccat
ggcaccaaggctgaggagcggacgggcaaggaggtggtgggccctctgcctggcctgcga
ctgcccagcaacaccgcccacctggagaccaaggccaccattttacccctgccatcccac
agcagtgtccagatgcagaacctggtggcccgggcctccaagtacgattttttcatccaa
aaactgaagactggtgagaacctgcggcctcagaatgggagcacctacaagaagccgtcc
aagtatgacctggagaacgtcaagtacctgcacctcttcaaacccggggagggcagcccc
gatatgggcggggccatcgccttcaagaccggcaaggtggggcgcccctccaagtacgat
gtccggggcatccagaagccgggccccaccaaggttccgcccacccccagcctggctcct
gcacccctcgccagtgtgcccactgctcccagcgcccctgggccagggcccgagccacct
gcttccttgtccttcaacactcccgagtacctgaagtccaccttctccaaaacagactcc
atcaccacggggaccgtctccactgtcaagaatggattgcccacagataaaccggctgtc
accgaagatgtaaacatttaccagaaatatattgccaggttctccggcagtcagcactgc
ggccacatccactgcgcctaccagtaccgcgagcactaccactgcttggaccccgagtgc
aactaccagaggttcacgagtaagcaggacgtgatccggcactacaacatgcacaagaag
cgcgacaactccctgcagcacggcttcatgcgcttcagcccgctggacgactgcagcgtc
tactaccacggctgccacctcaacgggaagagcacccactaccactgcatgcaggtgggc
tgcaacaaggtgtacacgagcacgtcggacgtgatgacccacgagaacttccacaagaag
aacacccagctcatcaacgacggcttccagcgcttccgggccaccgaggactgcggcaca
gccgactgccagttctacgggcagaagaccacgcacttccactgcaggcgtcccgggtgc
acgttcaccttcaagaacaagtgtgacatcgagaagcacaagagctaccacatcaaggac
gatgcctacgccaaggacgggttcaagaagttctacaagtacgaggagtgcaggtacgag
ggctgcgtgtacagcaaggccaccaaccacttccactgcatccgcgcaggctgcggcttc
accttcacctccaccagccagatgacctcgcacaagcgcaagcacgagcgccggcacgtc
cgctcctcgggcgtgttggggctgccgccctcgctgctgggcgccaaggacacggagccc
gaggagtccagcaacgacgacctggtcgacttctctgccctgagcagcaagaactccagc
ctgagcgcctcccccaccagtcagcagtcctccgcgtccctggccactgccgctgccacc
actgaggccgcgcccagtgccaccaagcctcccagcagcaagatccccgggctgatgccc
cagggcctgcctggctccatccccctggcgctggccctctccaactcaggcctgcccacc
gccgcaccctactttccccttcttcctggccgtggaagtacctccctgcctgtgggcgcc
cctggcctcctgggtgccatgtcatctggggcagcagcctcggcaacccccgacacgcct
gccctggtggcctcgggagctggagattcggccctggtgactgccacctctgtccccgtg
ccccccgcctccatcatggagagaatctctgcgagcaagggcctcatctcacccatgatg
gccagactggccgcagctgccctcaagccctctgccacctttgacccaggaagtgggcag
caggccacccccgccaggttccccccagcccaggtgaagcaggagccgggtgagagcgct
ggccccccaggtcccctcgaggcctcccaagaccgcagtctagacctgactgtgaaggag
tccagtaatgaatcaaatggccacgcagccccggcaaattcatctcttttatcctcgctt
atgaataagatgtctcagggcaaccccagcctcggaagcctgctaaacatcaagacagaa
gcagaggggagccccgctgcagagtcctcgcccttcctgggcaaggcggtgaaggccctg
gttcaggagaaactgtcagagccctggaaagtgtacctccgcaggtttggtaccaaggac
ttctgtgatgcccagtgtgacttcctccacaaggcgcacttccactgcgtggtggaggag
tgtggcgcactcttcagcaccctggacggggccatcaaacatgcaaacttccacttccgg
acggagggcggagcagcgaaaggaagcgcggaggcttccttcccagcctctgctgcagag
accaaacctcccctggcagcctcgccccctccggcacctcctggcactgcagtcccaggg
gcctctctggagggacctgctcccagcccggcctcagcctcggtgccctccacccccacc
ctgctcgcctggaagcagctggcttccaccataccccagatgcctcagattcccgcatca
gtgcctcacctgcccgcctcacccttggcgacgacctctctagagaatgccaagccccag
gtcaaacccggattcctccagttccaggagaacgacccttgcctcgcgacggactgcaag
tacgccaacaagttccacttccattgtctctttgggaactgcaagtacgtctgcaagacc
tctggcaaggctgagtcccactgcctggaccacatcaaccccaacaacagcctggtgaac
gtgcgagaccagtttgcttactactccctgcagtgtctctgccccaaccagcactgtgag
ttccggatgcgtggacactaccactgcctccggaccggctgctacttcgtcaccaacatc
accaccaagctgccctggcacataaagaagcatgagaaagctgagcggcgggcggccaac
ggattcaaatacttcaccaagcgcgaggagtgcggcaggctaggctgcaagtacaaccag
gtgaacagccacttccactgcatccgggagggctgccagttctccttcctcctgaagcac
cagatgacctcccacgcccggaagcacatgcggagggtgctcgggaggaacttcgaccgt
gtgcccccgtgccagggcgcccccagcctggtggacgccgagactgacgagggcgtggac
taccccggctgcagcccgggcgctgcctcctccgagtcctccaccatggatcgcagctgc
tccagcacccctgtgggcaacgagagcaccgcggcaggctgcccggctcctcctcctcct
cctcttcctcctcctgctgcggctggtgacgaggctgcccgaggggctgcgcagcccccg
ctggctgcacccttcccggccgggctccggccgcccctccccgccctcccatgcctcttc
tctccgtcctgtctctcacactctctgctcagtgccactctgggcgccggtcgcggcctg
gcccaccccatcagcagcccgcccagcttcccgcctgtcactgccactccaactccagta
aaaagtgacgtccccctagttcaggatgccgcagggaacaccatctccatgcccacagcc
tctggggccaaaaagcgcttctggatcatcgaggacatgtcgcccttcggcaaacggcgg
aagacggcctcctcgcgcaagatgctggacgagggcatgatgctggagggcttccggcgc
tttgacctctacgaggactgcaaggacacggcctgccagttctccctcaaggtcacccac
taccactgcacgcgtgagaactgcggctacaagttctgcgggcgcacgcacatgtacaag
cacgcgcagcaccacgaccgcgtggacaacctggtgctggacgacttcaagcgcttcaag
gcctcgctcagctgccacttcgccgactgccccttctcgggcaccagcacgcacttccac
tgcctgcgctgccgcttccgctgcaccgacagcaccaaggtcacggcgcaccgcaagcac
cacggcaagcaggacgtgatcagcgcggccggcttctgccagttcagctcgagcgccgac
tgcgcggtgccggactgcaagtacaagctcaagtgctcgcacttccactgcacctacccc
ggctgccgccacacggtcgtgggcatgtcgcagatggactcgcacaagcgcaagcacgag
aagcaggagcgcggcgagccgcccgccgcctcgcccggcgcgcccggcagcctggacggc
tcgctcacgctgggcgccgagcccgggggctccctgctcttcctgcagacggccgccgcc
ggcctgggcctggcgctcggcgacgccggcgaccccggcccgcccgacgccggcgccggg
ccgcgggaggctccagccgcgcccgctgcggccgcgggcgccggggagtcctcgcaggag
gacgaggaggaggagctggagctgcaggaggaggccgaggacgacgaggacgacgacgag
gatgaggacgacgacgaggacgacgacgaggacgacgacgacgaggacctgcgcaccgac
tcggaggagtcgctgcccgaggcggcagccgaagaggccgccggcgcgcggaccccggcg
ctggcggccctgggcgcgcccgggcccgcgcccgccgccgcgtcgccctag
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