Sciurus carolinensis (gray squirrel): 124983010
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Entry
124983010 CDS
T08117
Name
(RefSeq) cullin-associated NEDD8-dissociated protein 1 isoform X1
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124983010
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124983010
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
124983010
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124983010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP120
HEAT_EF3_N
HEAT_EZ
HEAT_2
HEAT
TOR1L1_N
MMS19_C
UME
HEAT_ECM29
Adaptin_N
Vac14_Fab1_bd
Cnd1
INTS7_N
mTOR_dom
ARM_ARMC5
RIX1
HEAT_DAAF5
Tti2
VHS
Sec7-like_HDS
V-ATPase_H_C
Dcc1
Uso1_p115_head
RRN3
Vps35
Motif
Other DBs
NCBI-GeneID:
124983010
NCBI-ProteinID:
XP_047405815
LinkDB
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Position
4:126339670..126381740
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AA seq
1230 aa
AA seq
DB search
MASASYHISNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDK
NGEVQNLAVKCLGPLVSKVKEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPA
SSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCL
LPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAA
ISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVSTIINI
CLKYLTYDPNYNYDDEDEDENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAV
VSTRHEMLPEFYKTVSPALISRFKEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQ
GETPLTMLQSQVPNIVKALHKQMKEKSVKTRQCCFNMLTELVNVLPGALTQHIPVLVPGI
IFSLNDKSSSSNLKIDALSCLYVILCNHSPQVFHPHVQALVPPVVACVGDPFYKITSEAL
LVTQQLVKVIRPLDQPSSFDATPYIKDLFTCTIKRLKAADIDQEVKERAISCMGQIICNL
GDNLGSDLPNTLQIFLERLKNEITRLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLR
KNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAISFLTTLA
KVYPSSLSKISGSILNELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLT
GPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALL
SLGEVGHHIDLSGQLELKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYLPFVLQEIT
SQPKRQYLLLHSLKEIISSASVVGLKPYVENIWALLLKHCECAEEGTRNVVAECLGKLTL
IDPETLLPRLKGYLISGSSYARSSVVTAVKFTISDHPQPIDPLLKNCIGDFLKTLEDPDL
NVRRVALVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREVEMGPFKHTVDDGLD
IRKAAFECMYTLLDSCLDRLDIFEFLNHVEDGLKDHYDIKMLTFLMLVRLSTLCPSAVLQ
RLDRLVEPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQS
QISSNPELAAIFESIQKDSSSTNLESMDTS
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcctcgtaccacatttccaatttgctggaaaaaatgacatccagcgacaag
gactttaggtttatggctacaaatgatttgatgacggaattgcagaaagattccatcaag
ttggatgatgatagtgaaaggaaagtagtaaaaatgattttgaagttattggaagataaa
aatggtgaggtacagaatttagctgtcaaatgccttggccctttagtgagtaaagtgaaa
gaataccaagtagagacaattgtagataccctctgcactaacatgctttctgataaagaa
caacttcgagatatttcaagtattggccttaaaacagtaattggagaacttcctccagct
tccagtggttctgcattagctgctaatgtatgtaaaaagattactggacgtctaaccagt
gcaatagcaaagcaggaagatgtctctgttcagctagaagccttggatattatggctgat
atgttgagcaggcaaggaggacttcttgttaatttccatccttcaattctgacctgtcta
cttccccagttgaccagccccagacttgcagtaaggaaaagaaccattattgctcttggc
catctggttatgagctgtggaaatatagtttttgtagatcttattgaacatctgttgtca
gagttgtccaaaaatgattccatgtcaacaacaagaacctacatacaatgtattgctgct
attagtaggcaagctggccataggataggcgaataccttgagaagataattcctttggtg
gtaaaattttgtaatgtagatgatgatgaattaagagaatactgcattcaagcttttgaa
tcatttgtgagaagatgtcctaaggaagtatatcctcatgtttctactattataaacatt
tgtcttaaatatcttacctatgatccaaattacaattatgatgatgaagatgaagatgaa
aatgctatggatgcagatggtggtgatgatgatgatcaaggtagtgatgatgaatacagt
gatgatgacgacatgagttggaaagtgaggcgtgcagctgccaagtgcttggatgccgta
gttagcacaaggcatgaaatgcttccagaattctacaagaccgtctctcctgcactgata
tccagatttaaagagcgtgaagagaatgtaaaagcagatgtttttcatgcctacctttct
cttttgaagcaaactcgtcctgtacaaagctggctatgtgacccagatgcaatggaacag
ggagaaacacctttaacaatgcttcagagtcaggttcccaacattgttaaagctctgcac
aaacagatgaaagagaaaagtgtgaagacccgacagtgttgttttaacatgttaactgaa
ctggtaaatgtattacctggggctctaacacaacacattcctgtgcttgtaccaggaatt
attttctcactgaatgataaatcaagctcatcgaatttgaagattgatgctttgtcatgc
ctatatgtaatcctctgtaaccactctcctcaagtcttccatcctcatgttcaggctttg
gtcccgccagtggtggcttgtgttggagacccattttacaagattacatctgaagcactt
cttgttactcaacagcttgttaaagtaatccgtcctttagatcagccttcctcgtttgat
gcaactccttacatcaaagatctatttacctgtaccattaagaggttaaaagcagctgac
attgatcaggaagtcaaggaaagggctatttcctgtatgggacagattatttgcaacctt
ggagacaatttgggttccgacttgcctaatacacttcagattttcttggagagactcaag
aatgaaattactcgattaactacagtgaaggcattaacactgattgctgggtcacctttg
aagatagatttgaggcctgtcctgggagaaggggttcctatccttgcttcatttctcagg
aaaaaccagagagctttgaaactggggaccctttctgccctagatattctaattaaaaac
tacagtgacagcctgacagctgccatgattgatgcagtcttagatgagctcccacctctt
atcagtgaaagtgatatgcatgtttcacagatggctatcagttttctgactaccctggca
aaagtttatccttcctccctctcaaagataagtggatctattctcaatgaacttattgga
cttgtgagatcacccttgttgcaggggggagctcttagtgccatgctagactttttccaa
gctctggttgtcactggaacaaataatttaggatatatggatttgttgcgcatgctgact
ggtccagtttactctcagagcacagctctgactcataagcagtcttattattccattgcc
aaatgtgtagctgcccttactcgagcatgccctaaggaggggccagctgtagtaggtcag
tttattcaagatgtcaagaactcaaggtctacagattccattcgcctcttagctctcctt
tctcttggagaagttgggcatcatattgacttaagtgggcagttggaactaaaatctgtt
atattagaagctttctcatctcctagtgaagaagtaaaatcagctgcatcctatgcatta
ggcagcattagtgtgggcaaccttcctgaatatctgccatttgttttacaagaaataacc
agtcaacccaaaaggcagtatcttctgcttcattccttgaaggaaattattagctctgca
tcagtggtgggccttaaaccatatgttgaaaacatctgggccttattattaaagcactgt
gagtgtgcagaagaaggtaccagaaatgttgttgctgaatgtctaggaaaactcactctc
attgatcctgaaactcttcttccacggcttaaggggtatttgatatcaggctcatcatat
gcccgaagttcggtggttacagctgtgaagtttactatttctgatcatcctcaacctatc
gatccactgttaaagaactgcataggtgacttcctgaaaactttggaagatccagatttg
aatgtaagaagagtagccttggtcacattcaactcagcagcacataacaagccatcatta
ataagagatcttttggatactgttcttccacatctttacaatgaaacaaaagttagaaag
gagcttataagggaggtagaaatgggtccatttaaacacacagttgatgacggtttggat
attagaaaggcagcttttgagtgtatgtatacacttctagacagttgccttgatagacta
gatatctttgaatttctaaatcatgttgaagatggtttgaaggaccattatgatattaag
atgctaacatttttaatgttggtgaggctttctaccctttgtccaagtgcggtactacag
agattggaccgacttgttgagccattacgggctacatgtacaactaaggtaaaggcaaac
tcagtaaagcaggagtttgaaaaacaagatgaattaaagcgatctgccatgagagcagta
gcagcactgctaaccattccagaagcagagaagagtccactgatgagtgaatttcagtca
cagatcagttctaaccctgagctggcagccatctttgaaagtatccaaaaagattcatca
tccactaatttggaatcaatggacactagttaa
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