Sciurus carolinensis (gray squirrel): 124983102
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Entry
124983102 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: rab11 family-interacting protein 1-like
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124983102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124983102
Membrane trafficking [BR:
ncar04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
124983102
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
BRX
Motif
Other DBs
NCBI-GeneID:
124983102
NCBI-ProteinID:
XP_047405979
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All DBs
Position
4:55026297..55057623
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AA seq
1247 aa
AA seq
DB search
MSLAASAGRGPGPVWSPTHVQVTVLQARGLRAKGPGGTSDAYAVIQVGKEKYATSVSERS
LGAPVWREEATFELPPLLSSEAVPAAAATLQLTVLHRALLGLDKFLGRAEVDLRELHRDQ
GRRKTQWYTLKSKPGKKDKERGEIEVDIQFMRNNMTASMFDLSMKDKSRNPFGKLKDKIK
GKNKDSASDTTSAIVPSMSPSVDSDDESFSKDKKKKSKIKTLFSKSNLQKTPLSQSMSVL
PTSKPDKVLLRPGDFQSRWDDDDNEDESSSSASDIISHKKTASADPKQLSQINFSLSKKE
GLSFLGGLRSKNDTLSRSNVCINGNHVYLEQPEAKNETKESSPSSSPSPQGFRKKHLFSS
TENLAARSWKEPGEGESMSYDRWLSDASIKESMKSMSLPSYRPLSSGDSRENMASSNSEA
TKEAKDSKKQESKKSSLLSLVTGKKDVTKGSESESPPSIPWKEKEGTLMESQLREEDLMR
SSEKDAAAEASGRGNSLNPFEDVPISEPEARLESKSEPKLPVPSARAPQTKAVKPRLEVS
PEAQPKARLPSSPDSPLSFSALPSSSDQAPVTSELGHSSETQSSESPSVFSSSSSPIVAP
ISTSTPIERWLPTGQDQASSEEPSLLLKTELQKECLTPHPSTMSSALGSLFKQPPISTWK
EMEDSPRGKISETGKGKNASIDEPGKHLLEHPEGEQPKELLKVSSPKQDHIPSSKEAHEV
PLVLSLNSDGNVSPAGKPTMGRDDKVRDGGMTSATEEAVPPFDAMMQKQEEMGLNASEGQ
KRVKKHVSFSEQLFTEEEAEKHTWLGEEDKNNPQEVTSEGATEEEVPDAELPGCLHTEDS
ERESVAVAHACSAPAPMEDHLLTPSSDEGPSEDPKSEASSVKGTPLFRIEGDDALMAQYQ
SKASDHEGLLSNLLSSLGSASDVKSPIMADLNLTLPSIPEVASDDERVDQVEEDRNTAKL
AEARASSLVTFPPCPKTGEGLSGGADGSAPIENLHDCRSEAPTVAPSEQMAALGIHKPHL
GKNSSVDKQLPVCDSGKEERPKGDERLSQPPGPSLESPVHSPSLSETFPAIRSLPSSPHS
NTYHTSTAESQKKTTAEGSAGKIDNFGKRKPLLQAWVSPSETHPVSAQPSAGTGAAKHRL
HPVKPMNTTATKIANSSLGTATIISENLINEAMMKKYNPSDPAFAYAQLTHDELIQLVLK
QKETISKKEFQVRELEDYIDNLLVRVMEETPNILRIPAQVGKKAGKM
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggcggcctccgcgggccggggcccggggcccgtgtggtcccccacccacgtg
caggtgactgtgctgcaggcgcggggtctgcgggctaagggccccggaggcacgagcgac
gcgtacgcggtgatccaggtgggcaaggagaagtacgccacctcggtgtcggagcgcagc
ctcggcgcgccggtgtggcgggaagaagccaccttcgagctgccgccgctgctgtcctcc
gaagctgtgccagcggccgccgccaccctgcagctcaccgtgctgcaccgtgcgctgctg
ggactcgacaagttcctgggccgcgcggaggtggacctgcgggagctgcaccgcgaccag
ggtcgccggaagacgcagtggtataccttgaaatccaaaccaggaaagaaggataaggag
cgaggagaaattgaggttgacatccagtttatgaggaacaacatgactgctagcatgttt
gatctctccatgaaagacaagtctcggaatccatttggaaaactgaaggacaagatcaaa
gggaagaataaggatagtgcatcagataccacttcggccatagtccccagcatgtcaccc
tcagtagacagtgatgatgagtctttttccaaagacaagaagaagaaatcaaagatcaaa
accttgttctcaaagtcgaatttgcagaaaaccccactttctcagtctatgtctgtcctg
cctacttcaaagccagacaaagtgctacttcgtcctggagacttccagtcccggtgggat
gatgacgacaatgaggatgagtcctcctcctctgcctcagacatcatatcccacaagaaa
acagcaagtgcagaccctaagcagctgagccagatcaacttcagcctatccaagaaggaa
ggactctcctttcttgggggccttcggtccaagaatgacacactttcccgctctaatgtc
tgcatcaatgggaaccatgtttacctggagcagccagaagccaagaatgagaccaaggaa
agcagcccttcttcttccccatccccccagggcttcaggaagaagcatttgttctcatct
actgaaaacctggctgctcgttcttggaaggagcctggggaaggagagagcatgtcttat
gataggtggctgtctgatgcctccatcaaggagtccatgaagtccatgtctctgccatcc
taccgaccactgtctagtggtgacagtagggaaaacatggcttcatcgaattcggaggcc
acaaaagaagccaaagacagcaagaagcaggagagcaagaagtcctctttgctttctctg
gtgacaggaaagaaggatgtgaccaagggcagtgaaagcgaaagccctcccagcatccca
tggaaggagaaggaaggtactctgatggaatcgcagctgagggaggaagacctcatgaga
agttctgagaaagatgctgcagccgaagcctctggacggggtaactccttgaaccccttt
gaagatgtgccgatctcagaaccagaagccagactcgagtccaagtctgaaccaaagcta
cctgttccctctgcaagggctccccaaaccaaagctgttaagcctagactggaagtgtct
ccagaggctcagcccaaagccaggcttccttcttcccctgactctcctctttctttttct
gctcttccttctagttctgatcaggcccctgtcacttctgaattggggcatagttcagag
acacagtcctctgaaagtccctctgtcttctcttcctcatcatctcccatagtagctcca
atttccacatctaccccaatcgaacgctggctccccacaggccaggaccaagccagttct
gaagaaccatctttgctccttaaaacagaattgcaaaaggagtgtttaacaccacatcca
agtaccatgtcttctgccctgggatcactttttaaacagccacccatctcaacatggaaa
gagatggaagattctccaagggggaagatcagtgagacaggcaaggggaagaatgccagc
attgatgaaccaggaaagcatctcctggagcatcctgaaggggagcaaccaaaagaactc
ctgaaagtttcctcccccaaacaagaccacatcccctcatctaaagaggcccatgaagtc
ccacttgtactttccctcaacagtgatggaaatgtaagccctgctgggaagcctaccatg
gggagagatgacaaagttagggatggtgggatgacttctgcaactgaggaagcagtgccc
ccatttgatgccatgatgcagaaacaggaagagatgggtctgaatgccagtgagggccaa
aagagagtcaagaaacacgtatcgttttctgagcagctcttcacagaagaggaggcagag
aaacatacttggttgggggaagaagacaaaaataatccccaggaggtgacttctgaaggg
gctactgaggaagaggtgcctgatgcagagcttcctgggtgtctccatacagaagactca
gagagggaatctgtggccgtggcccatgcttgcagtgccccagcgcccatggaagatcac
cttctcactccttctagtgatgagggtccctcagaagaccccaaaagtgaagccagctct
gtgaaaggcaccccactcttcaggattgagggggacgatgcccttatggctcaatatcag
agcaaagccagtgatcatgaaggtttgttgtctaacctcctgagcagccttggatctgcc
tcagatgtgaagtcccccatcatggctgatctgaatttgacccttccttccattcctgaa
gtggcctcagatgatgaaagagtagatcaggttgaagaagacaggaatacagcaaagctg
gctgaagcaagagcttcatccttagtcacatttcctccctgtcccaagactggagaggga
ctgagtggtggggcagatgggtcagcacccatagagaatctgcacgactgcaggtcagaa
gcccccacagtagctccttcagagcagatggcagctttaggaattcataaaccacatctt
ggcaagaactcaagtgtggataaacagctgccagtctgtgacagtggcaaggaagaaaga
ccaaagggagatgagaggctaagtcagcctcctggcccatccctggaatctcctgtgcac
agtccctccctttctgagacctttcctgccatacgctctctccccagctctccacattcc
aacacttaccacaccagtacagcagaatctcaaaaaaaaaccacagcagagggctccgct
ggtaaaattgacaattttggcaagaggaagccgcttcttcaggcctgggtctcaccctca
gagacacatccagtctcagctcagccaagcgctggaactggggcagccaagcacagactt
caccctgtgaagccaatgaatacaacagccaccaagattgctaactccagcttgggaact
gctaccatcatcagtgagaacttgatcaacgaagccatgatgaagaaatacaatccttcg
gaccctgcctttgcctatgcacagctgactcatgatgaattgatccagttggtcctcaaa
cagaaggaaaccataagcaaaaaggagtttcaggttcgagagctggaagactacattgac
aatctgcttgtcagagtcatggaagaaacccccaacatcctccgaattccggctcaggtt
ggcaaaaaagcaggaaagatgtga
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integrated database retrieval system
