Sciurus carolinensis (gray squirrel): 124983209
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Entry
124983209 CDS
T08117
Name
(RefSeq) cadherin EGF LAG seven-pass G-type receptor 2 isoform X1
KO
K04601
cadherin EGF LAG seven-pass G-type receptor 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124983209
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ncar04030
]
124983209
04515 Cell adhesion molecules [BR:
ncar04515
]
124983209
Peptidases and inhibitors [BR:
ncar01002
]
Mixed peptidases
Family P2
124983209
G protein-coupled receptors [BR:
ncar04030
]
Adhesion receptor family
Cadherin EGF LAG (CELSR)
124983209
Cell adhesion molecules [BR:
ncar04515
]
Cadherins
Major cadherins
124983209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
GAIN
7tm_2
Laminin_G_2
Cadherin_CELSR2_9th
Laminin_G_1
EGF
GPS
EGF_TEN
EGF_laminin
Cadherin_4
Fibulin_C
Cadherin_pro
EGF_Teneurin
hEGF
Dicty_CAR
Frizzled
Motif
Other DBs
NCBI-GeneID:
124983209
NCBI-ProteinID:
XP_047406230
LinkDB
All DBs
Position
1:complement(111980506..112005523)
Genome browser
AA seq
2924 aa
AA seq
DB search
MRSRAASAPLPTPPLPLPLLLLLLLLPLPPLLGDQVGPCRSLGSGGRGSSGACAPVGWLC
PASASNLWLYTSRCRDAGTELTGHLVPHHDGLRVWCPESGAHIPLPPAPEGCPWSCRLLG
IGGHLSPQGKLTLPQEHPCLKAPRLKCQSCKLAQGPGLRAGEGLPEESMGGRRKRNVNTA
PQFQPPSYQATVPENQPAGTSVASLRAIDPDEGDAGRLEYTMDALFDSRSNHFFSLDPVT
GAVTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESL
RENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEVFEIDSRSGVIRTRGPVDRE
EVEAYKLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVTPGAPV
LRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQD
GGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYLVLHVQAIDADAGDNA
RLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFGVEARDHGIPALTASASVSV
TILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSI
TSQSGGGLVSLALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYT
VNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQ
VSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQIS
ATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAYAVDKGM
PPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMY
QIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYVLVIQATSAPLVSRATVHVRLLDRND
NPPVLGNFEILFNNYVTNRSSSFPGGAIGRVPAHDPDVSDSLTYSFERGNELSLVLLNAS
TGELKLSRALDNNRPLEAIMSVLVSDGVHSVTAQCALRVTIITDEMLTHSITLRLEDMSP
ERFLSPLLGLFIQAVAATLATPPDHVVVFNVQRDTDAPGGHILNVSLSVGQPPGPGGGPP
FLPSEDLQERLYLNRSLLTAISAQRVLPFDDNICLREPCENYMRCVSVLRFDSSAPFIAS
SSVLFRPIHPVGGLRCRCPPGFTGDYCETEVDLCYSRPCGPHGRCRSREGGYTCLCREGY
TGEHCEVSARSGRCTPGVCKNGGTCVNLLVGGFKCDCPSGDFEKPYCRVTTRSFPARSFI
TFRGLRQRFHFTLALSFATKERNGLLLYNGRFNEKHDFVALEVIQEQVQLTFSAGESTTT
VSPFVPGGVSDGQWHTVQLKYYNKPLLGQTGLPQGPSEQKVAVVTVDGCDTGVALRFGAV
LGNYSCAAQGTQGGSKKSLDLTGPLLLGGVPDLPESFPVRMRHFVGCMKNLQVDSRHVDM
ADFIANNGTVPGCPTKKNVCDSNTCHNGGTCVNQWDAFSCECPLGFGGKSCAQEMANPQR
FLGNSLVAWHGLSLPISQPWHLSLMFRTRQANGILLQAVTRGRSTITLQLREGHVVLSVE
GTGLQASSLRLEPGRANDGDWHHAQLALGASGGPGHAILSFDYGQQRAEGNLGPRLHGLH
LSNITVGGAPGPASGVARGFRGCLQGVRVSETPEGASSLDPSRGESINVEPGCSLPDPCD
SNPCPANSYCSNDWDSYSCSCDPGYYGDNCTNVCDLNPCEHQSVCTRKPSAPHGYTCECP
PNYLGPYCETRIDQPCPRGWWGHPTCGPCNCDVSKGFDPDCNKTSGECHCKENHYRPPGS
PTCLLCDCYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPFAEVTTNGCEVNYDSCPR
AIEAGIWWPRTRFGLPAAAPCPKGSFGTAVRHCDEHRGWLPPNLFNCTSVTFSELKGFAE
RLQRNESGLDSGRSQRLALLLRNATQHTAGYFGSDVKVAYQLATRLLAHESAQRGFGLSA
TQDVHFTENLLRVGSALLDAANKRHWELIQQTEGGTAWLLQHYEAYASALAQNMRHTYLS
PFTIVTPNIVISVVRLDKGNFAGAKLPRYEALRGERPPDLETTVILPESVFREMTPVVRP
AGPGEAQEPEELARRQRRHPELSQGEAVASVIIYRTLAGLLPHNYDPDKRSLRVPKRPVI
NTPVVSISVHDDEELLPRALDKPVTVQFRLLETEERTKPICVFWNHSILVSGTGGWSARG
CEVVFRNESHVSCQCNHMTSFAVLMDVSRRENGEILPLKTLTYVALGVTLAALLLTFLFL
TLLRALRSNQHGIRRNLTAALGLAQLVFLLGINQADLPFACTVIAILLHFLYLCTFSWAL
LEALHLYRALTEVRDVNAGPMRFYYMLGWGVPAFITGLAVGLDPEGYGNPDFCWLSIYDT
LIWSFAGPVAFAVSMSVFLYILAARASCAAQRQGFEKKGPVSGLQPSFAVLLLLSATWLL
ALLSVNSDTLLFHYLFAACNCVQGPFIFLSYVVLSKEVRKALKFACSRKPSPDPALTTKS
TLTSSYNCPSPYADGRLYQPYGDSAGSLHSASRSGKSQPSYIPFLLREESTLNPGQVPPG
LGDPGSLFLEGQDQQHDPDTDSDSDLSLEDDQSGSYASTHSSDSEEEEEEEEEAAFPGEQ
GWDSLLGPGAERLPLHSTPKDGGPGPGKAPWPGDFGTTAKESGGSGAPEERPRENGDALS
REVSLGSLPGPSAQPHKGILKKKCLPTISEKSSLLRLPLEHGTGSSRGSSASEGSRGGPP
PRPPPRQSLQEQLNGVMPIAMSIKAGTVDEDSSGSEFLFFNFLH
NT seq
8775 nt
NT seq
+upstream
nt +downstream
nt
atgcggagccgggctgccagcgcccccctcccaacgccgccgctgccgctgccgctgctg
ctgctgctgttactgctgccgctgccaccgctactgggagaccaagtggggccctgtcgt
tccctggggtctgggggacgaggctcctcgggggcctgcgcccccgtgggctggctctgt
ccagcttcagcctcgaacctttggctctacaccagccgctgcagagatgcgggcactgag
ctgactggccacctggtgccccaccacgatggcctgagagtctggtgtccagaatctggg
gcccatatcccccttccaccagcccctgaaggctgcccctggagctgtcgcctcctgggc
attggaggccacctttctccacagggcaagttgaccctgcctcaggagcacccttgctta
aaggctcctcggttgaaatgtcagtcctgcaagctggcacagggcccagggctcagggca
ggggaagggttaccagaggagtccatgggtgggcgtcgaaaaaggaatgtgaatacagca
cctcagttccagcctcccagctatcaggccacagtgcctgagaaccagccagcaggtacc
tctgttgcatccctccgtgccatcgatccagatgagggagacgcaggtcggcttgagtac
accatggatgccctcttcgacagccgctccaaccatttcttctccttggacccagtcact
ggtgctgtcaccacagcagaggagctggatcgggagaccaagagcactcatgtcttcagg
gtcactgcacaggatcatggcatgcctcgaaggagtgccctggccacacttaccatcttg
gtgactgacaccaatgaccacgaccctgtttttgagcagcaggaatacaaggagagcctc
agggagaacctggaggttggctatgaggtgctcactgtcagggccacggatggtgatgcc
cctcccaatgccaatattctctaccgcctgctggaggggcctgggggcagcccctcagaa
gtctttgaaattgactctcgctctggtgtgatccgaactcgtggcccagtggatcgggaa
gaggtggaggcctacaagttgacagtggaagcaagtgaccagggtcgggacccgggtcca
cggagtgccacagccgctgttttcctgtctgtggaggatgacaatgacaatgcccctcag
tttagtgagaagcgttatgtggtccaggtgcgagaggatgtgaccccaggggcaccagta
ctccgggtcacagcctcagaccgggacaagggcagcaatgccctggtgcactatagcatc
atgagtggcaatgctcggggacagttttatttggatgctcagactggggccctggatgtg
gtgagccctcttgactatgagacaaccaaagaatatactctacgagtgcgggcacaggat
ggcggccggcccccactctccaatgtttctggcttggtaacagttcaagtcctggatatt
aatgataatgcccctatctttgtcagcacccctttccaagctaccgtcctggagagcgtc
cccttaggctacttggttctccatgtccaggcaattgacgccgatgctggtgacaatgcc
cgcctggaataccgccttgctggagttgggcatgacttccctttcaccatcaacaatggc
acaggctggatctctgtggctgctgagctagaccgggaggaggttgatttctacagcttt
ggggtagaagcacgagaccatggcatcccagcactcactgcctcagccagtgtcagtgtg
accatcctggacgtcaatgacaacaacccaacctttacccaaccagagtacacagtgcgg
ctcaatgaggatgcggctgtgggcactagtgtggtgactgtatcagctgtggaccgtgat
gcccatagtgtcatcacatatcagatcactagtggcaacacccgcaaccgcttctccatc
accagccagagtggcggtgggctggtgtccctcgctttgccactggactacaaacttgag
cgacagtatgtgttggctgttactgcctctgatggcacaagacaggacacagcacagatc
gtggtgaacgtcactgatgccaacacccatcgtccagtctttcagagctcccactataca
gtgaacgttaatgaggaccggccagcaggtaccacagtggtgctgatcagtgctacagat
gaggacacaggtgagaatgcccgtattacctactttatggaggacagcatcccccagttc
cgtattgatgcagacacaggggctgtcaccacacaggctgaactggactatgaagatcag
gtgtcttataccctggccatcactgctcgggacaatggcattccccagaagtctgatacc
acctacctggagatcctggtgaatgacgtgaatgacaatgcccctcagttcttacgggat
tcctaccagggcagtgtctatgaggatgttccgcctttcaccagtgtcctacagatctca
gccactgatcgtgactctggtcttaatggccgggtattctataccttccaaggaggtgac
gatggagatggtgactttattgtagagtccacttcaggcattgtgagaacgctgcggagg
ttagatcgtgagaatgtggcacagtacatcttgcgagcgtatgcagtggacaaggggatg
cccccagcccgcacacccatggaagtgacagtgactgtgttggatgtgaatgacaatcca
cctgtctttgagcaggatgagtttgatgtgtttgtagaagagaacagccccattgggctg
gccgtggcccgtgtcactgccactgaccctgatgaaggcactaatgcacagatcatgtac
caaattgtggagggtaacatccctgaggtcttccagttggacatcttctctggagagctg
actgccctggtggacttagactacgaggaccgacctgaatatgtcctggtcatccaggcc
acatcagctcccctggtaagcagggccactgtccacgttcgcctccttgaccgcaatgac
aacccaccagtgctgggcaactttgaaatccttttcaacaactatgtcaccaaccgctcg
agcagcttccctgggggtgccattggccgtgtgcctgcccatgaccctgatgtctcagat
agcttgacttacagctttgagcgaggaaatgaactcagcttggtcctgctcaacgcttcc
acaggagagctgaagctgagccgggcactggataacaaccggcctctggaggccatcatg
agcgtgttggtgtcagatggtgttcacagtgtgacagcccagtgtgctctgcgcgtcacc
attatcacagacgagatgctcacgcacagcatcacgctgcgcctggaagacatgtcgcct
gagcgcttcctgtcaccactgctgggcctcttcatccaagctgtggcggccacgctggcc
acgcccccggaccacgtggtggtcttcaacgtgcagcgggacaccgacgcccctggtggt
cacatcctcaacgtgagcctgtcagtgggccagccgccggggcccgggggtgggccgccc
tttctgccctccgaagacctgcaggagcgcctgtacctcaaccgcagcctgctgacagcc
atctccgcacagcgcgtgctgcccttcgacgacaacatctgcctgcgcgagccctgcgag
aactacatgcgttgcgtgtcggtactgcgcttcgactcctccgcgcccttcatcgcttct
tcctccgtgctctttcggcccatccacccagtcgggggcctgcgctgtcgctgtcccccg
ggtttcaccggcgactactgtgagactgaggtggatctctgctattcgcggccctgtggt
ccccatgggcgctgccgcagtcgtgagggagggtacacctgcctctgccgcgagggctac
acgggtgagcactgtgaggtgagtgcccgctcaggccgttgcaccccaggtgtctgcaag
aatgggggtacctgtgtcaacctgctagtgggtggtttcaagtgcgactgcccatctggg
gactttgagaagccctactgccgggtgaccacgcgcagcttccctgcccgctcctttatc
accttccgtggcctgcgccagcgcttccacttcaccctggccctttcgtttgccactaag
gagcgcaatgggctgctgttgtataatgggcgcttcaatgagaagcatgactttgtggcc
ctcgaggtgatccaggagcaggttcaactcaccttctctgcaggagagtcaaccaccacc
gtgtcaccatttgtacctgggggggtcagtgatggccagtggcacacagtgcagctgaag
tactataataagccactgttgggccagacagggctcccgcagggcccatctgaacagaag
gtggctgtggtgactgtagatggctgtgatacaggagtggctctgcgcttcggagctgtg
ctgggcaactactcctgtgctgctcagggcacccagggtggcagcaagaagtctctggat
ctgacagggcccctgctgctgggtggggtgcctgacctgcccgagagcttccctgtccga
atgcggcactttgtgggctgcatgaagaacttgcaagtggacagccggcatgtagacatg
gctgacttcattgccaacaatggcactgtgcctggctgccccaccaagaagaacgtgtgt
gacagcaacacttgccacaatgggggcacctgcgtgaaccagtgggatgcattcagctgc
gagtgtcccctgggcttcgggggcaagagctgtgcccaggaaatggccaatccccagcgc
ttcctgggcaacagccttgtggcctggcatggcctctcactgcccatttctcagccctgg
cacctcagtctcatgttccgcacacgccaggccaatggcatcctgctgcaggccgtcacc
aggggacgcagtaccattactctacagcttcgggagggccatgtggtgctgagcgtggag
ggcacagggctccaggcctcctctctccgtctggagccaggccgggccaatgatggtgac
tggcaccacgcacagctggcactgggagccagcgggggccctggccatgccatcctgtcc
ttcgattatgggcagcagagggcagagggtaacctgggtccccgcctgcatgggctccac
ctaagcaacattacagtggggggagcacctgggcctgccagtggtgtggcccgcggcttc
cggggctgtttgcagggtgtgcgggtaagcgagacgcccgagggtgccagcagtcttgat
cccagccgtggggagagcatcaacgtggagccaggatgtagcttgccagacccctgtgac
tccaacccatgtcctgctaacagctactgcagcaacgactgggacagctattcctgcagc
tgtgatccaggttactatggtgacaactgtactaatgtgtgtgacctgaacccatgtgag
caccagtctgtgtgtacccgcaaacctagtgctccccacggctacacctgtgaatgtccc
ccaaattacctcgggccatactgtgagaccaggattgaccagccttgcccccgtggctgg
tggggacaccccacatgtggcccatgcaactgtgatgtcagcaaaggctttgacccagac
tgcaacaagacaagtggcgagtgccactgcaaggagaatcactaccggccccctggtagc
cccacctgcctcctgtgtgactgctaccccacaggctctttgtctcgagtctgtgaccct
gaggatggccaatgtccatgcaagcctggtgtcatcgggcgccagtgtgatcgctgtgac
aacccttttgctgaagtcaccaccaatggctgcgaagtgaattatgacagctgcccacgg
gctatcgaggctgggatctggtggccccgcacccgctttgggctgcctgctgctgccccc
tgccccaaaggctcctttgggaccgccgtgcgccactgtgatgaacacagggggtggctt
cccccaaacctcttcaactgcacatcagtcaccttctcagagctgaagggtttcgctgag
cggcttcagcggaatgagtcaggcctggactcgggacgctcccagcggctggccctgctc
ctgcgcaatgctacacagcacacggctggctattttggcagcgatgtcaaggtggcctac
cagttggccacacgattgctggcccacgagagtgcccagaggggctttgggctgtctgcc
acgcaggatgtgcacttcactgagaatctgctgcgagtgggcagtgcccttctggacgca
gccaacaagcggcactgggaactgatacagcagacagagggcggcaccgcctggctgctc
cagcactatgaggcctacgccagcgccctggcccagaatatgcggcacacctatctaagc
cccttcaccattgtcacacccaacattgtcatctctgtagtgcgcttggacaaggggaac
tttgctggggccaagctgccccgctatgaagcattacgtggagagcggcccccagaccta
gagacaacggtcattctacctgaatctgtcttcagagagatgacccctgtggtcaggcct
gctggccctggggaggcccaggaacctgaggaactggcacggcggcagcggaggcaccca
gaactgagccagggagaggctgtggccagcgtcatcatctaccgcaccctggctgggcta
ctgccccacaactatgacccagacaagcgcagccttagagtccccaagcgcccagtcatc
aacacacctgtggtaagcatcagtgtccatgatgacgaggagctcctgcctcgcgccctg
gacaagccagtcactgtgcagttccggttgctggagactgaggagcggactaagcccatc
tgtgtcttctggaaccactcgatcctggtcagtggcacgggcggctggtcagctcgaggc
tgtgaagttgtcttccgcaacgagagccatgtcagctgccagtgcaaccacatgacaagc
ttcgctgtgctcatggatgtgtcccggcgggagaacggggagatcctgccactgaagaca
ctgacatacgtggccctaggagtcaccttggctgccctgctgctcaccttcctcttcctc
actcttctgcgtgccctgcgctccaatcagcatggcatccgacgcaacctgacagctgcc
ctgggcctggctcagctggtcttcctcctgggaatcaaccaggctgacctgccttttgct
tgcacagtcattgccatcctgctgcacttcctgtacctctgcaccttttcctgggctctg
ctggaggccttgcacctgtaccgggcactcacagaggtccgtgacgtcaatgccggcccc
atgcgcttctactacatgctgggctggggcgtgcccgccttcatcacaggtctagctgtg
ggcttggaccctgaaggatatgggaaccctgacttctgctggctctccatctatgatacg
ctcatctggagtttcgctggtcctgtggcctttgctgtctcgatgagtgtcttcctgtac
atcctagcagcccgggcctcctgtgctgcccagcggcagggcttcgagaagaaaggccct
gtctctggcctgcagccttcctttgctgtcctcctgctgctaagtgccacatggctgctg
gcactgctctccgtcaacagtgacacccttctcttccactacctctttgccgcctgcaat
tgtgtccagggccctttcatcttcctctcctacgtggtgctcagcaaggaggtccggaaa
gcactcaagtttgcctgtagccgcaagcccagccctgaccctgctcttaccaccaagtcc
accctgacctcgtcctacaactgtcccagcccctatgcagacgggcgactgtaccagccc
tatggagactcagctggctcactgcacagtgccagccgctcaggcaagagccaacccagc
tacatccccttcttgctgagggaagagtccacactgaaccctggtcaagtgcccccaggc
ctgggtgacccaggcagcctcttcctggaaggtcaagaccagcagcacgatcctgacacg
gactctgacagtgacctgtccctggaagatgaccagagtggctcctatgcctctacccac
tcatcagacagcgaggaggaggaagaggaggaggaggaggccgccttccctggcgagcag
ggctgggacagcttgctggggcctggagcggagagactgcccctgcacagcacccccaag
gatgggggcccggggcctgggaaggccccctggccaggagactttggaaccacagcaaag
gagagtggtggcagtggggcccctgaggaacggccacgggaaaatggagatgccttgtct
cgggaggtgtccttgggctcccttcccggtccttccgcccagcctcacaaaggcatcctc
aagaagaagtgtctgcccaccatcagtgagaagagtagcctcctgcggctgcccttggag
catggcactgggtcatctcggggctcttcagccagtgaaggcagtcggggtgggccccct
ccccgcccgcctccccggcagagtctccaggagcagctgaacggggtgatgcccatcgcc
atgagcatcaaggcaggcaccgtggatgaggactcatcaggctccgaatttctcttcttt
aacttcctgcattaa
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integrated database retrieval system
