Sciurus carolinensis (gray squirrel): 124983226
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Entry
124983226 CDS
T08117
Name
(RefSeq) cilia- and flagella-associated protein 74-like isoform X1
KO
K25607
cilia- and flagella-associated protein 74
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncar03037
]
124983226
Cilium and associated proteins [BR:
ncar03037
]
Motile cilia and associated proteins
Sperm associated proteins
124983226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig-CFAP74_2
Ig-CFAP74_4th
Ig_CFAP74_1st
Ig-CFAP74_3rd
Ig_CFAP65_4th
HYDIN_VesB_CFA65-like_Ig
Cep192_D4
ASH
Cep192_D3
Ig_CFAP65
Cep192_D8
Motif
Other DBs
NCBI-GeneID:
124983226
NCBI-ProteinID:
XP_047406267
LinkDB
All DBs
Position
1:208109947..208153492
Genome browser
AA seq
1725 aa
AA seq
DB search
MEPRAPRPGQPRGPPPGRAAEEGLGPERTEQPLESRSPSLDMEGAASLISGEELPDSLPS
MEDERDTLTDLEFEVGSLPEGPESTAASGHCSSVKEKQAEACAAGVRRAAAAEDRIQESQ
LRRHLDLLDRMQEEKDFFIQKTREELRTCRQRMDLLSKQQETVAAEMAREREASNTAAVG
RLQASSRRLHTELENERDLQSRITAMLKENENAMWHIEMEKGRFQDLHQPSLEEAEARGR
RLQGLAAQRLLKEKEAAEKAERNQRLRVGKSLHVQRELGLEHQRRMEDAQRNHKVAIEFL
KVSLGRAREQEKKQETESRQVLKQRMDAVLALKSSITANRETLRKIQAWGRARAALAEQK
ASAEKEAILAQGGDAFKHLFHHRRRQHLEAQRRTFQEEQQLRKQEIVGRILKEEAEEESR
KKKQLRPARAAVGRTLRDKTWNYIANICTGKMATMATSLPLEAEAAHPETSLLLKVISSE
SVQGDPGTTSGEEETLAEPEIPGLWQEDCAHYQELKEDVGRKPVGGTKMDKDILARTVAQ
LRSRVIHKQVVSGREFKGRPFNSKPQLVHFKDFEVGEVYKKKITLVNATYTINYCSLVGV
DESLRDFVHIGFDPPGPMSAGMSCEVLVTFKPMINKDLEGSISFLAQTGSFSVPLKCSTK
KCSLSLDKELINFGSYVVGETTSRTITLTNVGGLGTKFKVLPASEACEMDEEPSPLLNIS
SLLTSEDKSACEKGLASVSEQQLEGKTSLLDTQSRKELERMEGELPAGGRHPTSGSSLPG
LQAAQACREQEGTSATGGLATFPSEEQAEITLGETTEGEIGPFSSVRVPVVFTPVIPGEV
QTEFKVMFKNPKCPTLYFRAKGVAIDVPVWVPKPNLDLKICMYDRLYQDSVPIHTRSKVA
LRLKFEVCKELRGHVELLPETGYIQAHSTYSVQLKFLPRHSLPEDAGKYFDKESRVLEAP
MTIWVADQCPSLLAQWRRGGAGDTHPPSMPQMKPVGFTIQAIVTTSDLELNPQELDFGYC
TIYQALRTEIVLYNPSLLPQEFGFVGLPKFVDIQPNDGFGTILPLEALQLDVIFQPTKAK
EYSFELVCKSEVNRCFKMSCRAVGVHPPLELSHYQIKFAATPLYDTSVARLYVLHSHPAV
SSLPHSGPRTDSEEVSPVGATTFEFLLPSDSPITISPLVGTVLPGKRCLVQVAFRPVLTH
ARIHEEALQILNKEIQDKLFRKDTLSQRKELWRQSLSVLRLRTRDRLLRAVAASHPPQQQ
KQELRVSSHDYQIAQAALARNFQGKFEKFVVPCVMASGDVKDRKGSEPLTFSPHNTLYLE
LWCPAVAPSIVVTSNKGKTTFHFGDIAVGHRSIKKVSLQNISPDDLAVEFSVLNPNGPFS
LLNPFSKLCSGETQVLMLSFSPRESILAQETLDVISEKGNLTLTLTGMGVASMVTCSIEG
NVLNMGYVLARESVSSSFKLQNDSSLPIKFSMRLESLSSTRALARQQLPQFLATPTRRTD
FVGTQNHNGQSVFSVLPVEGVMDPGKEQDCTVTFSPDHESLYFSDRLQVVLFEKKISHQI
LLQGAAREHAMFVEGGDPLDVPVESLAAISAVGPEHREGSPSPEAEELKPILVTLDYVQF
DADTPAPPATRELQVGCIRTTQLSPKKMAEFSMDSVTWLQHKGFSIEPSRGFVERGQTKT
ISISWVPPVDFDPDHPLMVSALLQLRGDVKETYKIILVANVVTGS
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcgagcgccgcggccagggcagccgagagggccaccgcctggccgggccgct
gaggagggcctcgggccggagaggacggagcagcccctggagagcagatctccatctctc
gacatggaaggagctgctagtctgatctctggagaggagcttccggacagtcttccctcc
atggaggatgagagagacacgttgacggatttggagtttgaggtgggctctctccccgag
ggcccggagagcaccgctgcctcgggccactgcagttcagtgaaagaaaagcaagcggaa
gcctgtgccgcaggggtcagaagggcagccgccgcggaggacaggatccaggagtcccag
ctgcggaggcacctggacctcctggacaggatgcaggaggagaaagacttcttcatccag
aagaccagagaagagctgcgcacctgccgccagcggatggacctcctcagcaagcagcag
gagaccgtggcggccgaaatggcccgggaaagagaggccagcaacacggcggctgtgggc
cgtctccaggcctcttcccgacgcctgcacacagagctggagaatgaaagggacctgcag
tcaagaatcacggccatgctgaaagaaaatgagaacgccatgtggcacattgagatggag
aaggggcggttccaggacctccaccagcccagcctcgaggaggcagaggccaggggcagg
cgtctccaggggcttgcggcacagcgactactcaaggagaaagaggccgcagagaaggcg
gagaggaaccagcggctgagggtcgggaagtccctgcacgtgcagagggagctggggctc
gaacaccagaggcggatggaggacgcccagaggaaccacaaggtggccatcgagttcctg
aaggtctcgctgggacgagctcgggagcaggagaagaagcaggagactgagtcccgccag
gtcctgaagcagcgcatggacgccgtgctggctctgaagagcagcatcaccgccaaccgg
gagacactgcgcaagatccaggcctggggccgggcccgggcagcgctggctgagcagaag
gccagcgccgagaaggaggccatcctggcccagggtggggacgccttcaagcaccttttc
caccaccgccggcgccagcacttggaggcccagaggcggaccttccaggaggagcagcaa
ctccggaagcaggagatcgtaggtcggattttgaaagaggaggctgaggaggaaagccgg
aagaagaaacagctgcgcccggccagagctgcagttggacgcactctgagagacaagacc
tggaactacatcgccaacatctgcacagggaagatggccaccatggccaccagtctccca
ctggaggcggaggcagcacatcccgagacctctctgctcctgaaagtcatctccagtgag
tctgtgcagggggaccctgggaccaccagtggagaggaagaaacactggctgagcccgag
atccctgggctttggcaggaagactgtgcacattaccaggaactcaaggaggatgtgggc
cgaaagcccgtgggcggcaccaagatggacaaggacatcctggcacgcacggtagcgcag
ctacgcagcagagtgatccacaagcaggtggtgtcagggcgggagttcaaaggccgcccc
ttcaacagcaagccccagctggtccacttcaaggacttcgaggtgggcgaagtgtacaag
aagaagattacgctggtgaacgctacctacaccatcaactactgctcgctggtgggagtg
gacgagagcctgcgggacttcgtccacatcggctttgacccccctgggcccatgtcagcc
gggatgtcctgtgaagtgctggtcaccttcaagcccatgataaataaagatctggaagga
agcatctccttcttggctcagacaggcagcttttctgttcctctgaaatgttcaacaaag
aaatgttccctgtcccttgacaaggagctcatcaactttggcagctatgtggtgggtgag
accacatcccgcaccatcacactgaccaacgtcgggggcctcggcacaaagttcaaggtt
cttccagcttccgaggcctgtgagatggacgaagaaccctcgcccctcctgaacataagc
agcctgctcacctccgaagacaagagtgcctgtgagaagggtctggccagcgtctctgag
cagcagctcgaaggcaagacctccctgctggacacccagagccggaaggagctggagagg
atggagggtgagctgcctgccggtggccggcaccccacctcaggctcctccctgcccgga
ctccaggctgcccaggcatgccgagaacaagagggcacctctgcgactgggggcttggcc
acgtttcccagcgaggagcaggcggagatcacactgggggagacaacggagggggaaatt
ggcccttttagctccgtcagagtgcccgtcgtgttcaccccggtcatcccaggggaggtc
cagaccgagttcaaggtcatgttcaagaatcccaagtgcccaacgctgtatttcagagcc
aagggcgtggccatcgatgtgccggtctgggtgcccaagcccaacctggacctgaagatc
tgcatgtacgaccgtctctaccaggactctgtccccatccacacgcgatccaaggtggcc
ctgcgcctcaagttcgaggtgtgcaaggagcttcgaggccacgtggagctcctgccggag
acgggctacatccaggcccattcgacctactcggtgcagctcaagttcctgccccggcac
tccctcccagaggacgctggcaagtactttgacaaggagagcagagttctggaggctccg
atgaccatctgggtggccgaccagtgcccatccctgcttgcccagtggagaagagggggt
gctggggacactcaccccccgtccatgccacagatgaagccagtgggcttcaccattcag
gccatcgtcaccacctcggacctggagctcaacccccaggagctggacttcggctactgc
accatctaccaggccctgaggacggagattgtgctctacaacccctcgctcctgccccag
gagtttgggttcgtggggctccccaagtttgtggacatccagcccaatgacgggtttggg
acgatcctgccgctggaggctctgcagctggatgtgatcttccagcccaccaaggccaag
gagtacagcttcgagctggtctgcaagtctgaggtgaacaggtgcttcaagatgtcctgc
cgagccgtgggtgtccacccccccctggagctgtcccactaccagatcaagtttgcagcc
actcccttgtatgacacttcagtggcccggctatatgtcctccactcccacccggctgtg
agctccctgccccactctgggccccgcactgactcagaggaggtctcccccgtgggagcc
acgacgtttgagtttctgctgccctcggactcccccatcaccatctcgcccttggtgggg
accgtgttgccaggcaagagatgcctggtccaggtggccttccggcctgtgctgacccat
gcgcggatccacgaggaagccctccagatcctgaacaaagaaatccaggacaaactgttc
cgaaaggacaccttgagccaaaggaaggagctgtggaggcagtccctctccgtgctccgc
ctgcggacccgggaccgcctgctgcgtgccgttgcggcctcccaccccccacagcagcag
aagcaggagctccgggtcagttcccatgattaccagatcgctcaggctgccctggccaga
aatttccaggggaagtttgaaaagtttgtggtcccatgtgtcatggccagtggtgacgtc
aaagacaggaagggatcagaacccctgaccttcagcccccataacaccctgtacctggag
ctgtggtgtccagcggtggctccgtctatcgtggtgacatctaacaaaggcaagaccacc
tttcactttggcgatattgctgtaggacaccgcagtataaagaaggtctcgctccagaac
atctcgcctgatgacctggctgtggagttctcggtactgaaccccaacggccccttctcc
ctgctgaaccccttcagcaagctgtgctcgggggagacccaggtgctgatgctgtccttc
tctccccgcgagagcatcctggctcaagaaacactggatgtcatcagcgaaaaaggcaac
ctcaccctgaccctcaccggcatgggcgtggcgtccatggtcacgtgctctattgaaggc
aatgtgctgaacatgggctacgtgcttgccagagagtccgtctcctcaagtttcaagctg
cagaacgactcctcgctccccatcaagttctccatgcggctggagagcctctccagcacc
cgggccctggcccggcagcagctgcctcagttcctggccacacccacccggaggacagac
tttgtcggcacacagaaccacaatggccagagcgtgttcagtgtgctcccagtggagggt
gtcatggaccccgggaaggagcaggactgcaccgtgaccttcagccctgaccacgagagc
ctctacttctctgaccggctccaagtggtgctcttcgaaaagaaaatctcccaccagatc
ctcctgcagggcgctgcccgggagcacgcgatgttcgtggagggcggagacccgctggac
gtgcctgtggagtctctcgctgcgatatctgccgttggccctgagcacagagagggctcc
ccctctccagaagctgaggagctgaagcccatcctggtgaccctggattacgtccagttt
gatgcagacacaccagccccacctgccacccgagagctgcaggtgggctgcatcaggacc
acccagctctccccgaagaagatggcagagttcagcatggacagtgtcacgtggctgcag
cacaaaggcttctccatcgagccctccaggggcttcgtagagcgcggccagaccaagacc
atcagcatctcctgggtgccacccgttgacttcgacccggatcatcctctcatggtgtca
gccctgctgcagctcagaggggatgtgaaggaaacctacaagatcatcttggtagccaac
gtggtgaccggctcctga
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integrated database retrieval system
