Sciurus carolinensis (gray squirrel): 124983253
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Entry
124983253 CDS
T08117
Name
(RefSeq) myomesin-2 isoform X1
KO
K24495
myomesin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124983253
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
124983253
Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
124983253
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
Pur_ac_phosph_N
V-set
Tissue_fac
C2-set_2
Adeno_E3_CR1
Synapsin
CENP-T_N
Motif
Other DBs
NCBI-GeneID:
124983253
NCBI-ProteinID:
XP_047406348
LinkDB
All DBs
Position
4:1235893..1351635
Genome browser
AA seq
1505 aa
AA seq
DB search
MGGRTGLQRENWALLAKPEPRELGAQRPDLSPRPLLQLRAAMSLVTLPFHQKRHRHFDQS
YRNIQTRYLLDEYASKRRASSRSSAQRSLTQQSSAQRASSQTSTGATTCRLCAKRLSASE
EEHEKERRYQSLVAAYGEAKRERFLSELAQLEEDVHLARSQARDKLDKYALQQMVEDKLA
WERHAFEERVSRAPEILVRLRSHTVWERMSVTLCFTVQGFPTPVVQWYKDGSLICQAGEP
GKYRIESKYGVHTLEINRASFDDTATYSAVATNAHGQVSTNAAVVVRRFRGDEEPLHSVG
LPIGLPLSSVIPYTHFDVQFLEKFGVTFRREGETLTLKCTLLVTPDLKRVQPRAEWYRDD
VLVKESKWTKMFFGEGQASLSFSHLNKDDEGLYTLRIVSRGGVSDHSAFLFVRDADPLVT
GAPGAPMDLQCHDANRDYVIVTWKPPNTTTESPVIGYFVDRCEVGTNNWVQCNDAPVKIC
KYPVTGLFEGRSYVFRVRAVNSAGVSRPSRVSDAVAALDPADLRRLQAIHLEGEKEIVIY
QDDLEGDVQIPGPPSNVHVSEVSRTYVVLSWDPPTPRGKEPLMYFIEKSVVGSGSWQRVN
AQTAVRSPRYAVFDLAEGKSYVFRVLSANKHGLSDPSEITPPIQAQDTIAVPSAPGRVLA
SRNTKTSVVVQWDRPKHEEALLGYYVDCCVAGTNLWEPCNHKPIGYNRFVVHGLTTGEQY
VFRVKAVNAVGTSENSQESEAIKVQAALTVPSHPYGITLLNCDGHTMTLGWKVPKFSGGS
AILGYYVDKREAHHKNWHEVNSSPVQQRILTVEGLVEGSAYEFKIAAVNLAGIGQPSDPS
ELFKCEAWTAPEPGPAYDLTFCEVRNTSLVMLWKAPVYAGSSPVSGYFVDFKEEDSGEWK
TVNEAATPNRYLKVCDLHQGRTYVFRVRAVNASGPGKPSDMSEPVLVEARPGTKEISAGV
DEEGNIYLAFDCQEMTDASQFTWCKSYEEIADEEKFRVHTEGDHSRLYFKNPDKVDVGTY
SVSVSDTDGVSSSFVLDEEELERLMALSNEIKNPTIPLKSELAYEIFDKGQVRFWLQAEQ
LSPDASFRFVINDREVSDSETHRIKCDKSTGIIEMVMDRFTIENEGTYTVQIQDGKAKNQ
SSLVLIGDAFRTVLEEAEFQRKEFLRKQGPHFAEYLHWDVTEECEVRLVCKVANTKKETV
FKWLKDDVLYETETLPDLEKGVCELLIPKLSKKDHGEYKATLKDDRGQDVSTLDIAGKVY
EDMILAMSRVCGASASPLKILCTPEGIRLQCFMKYFTEEMKVNWYHKDAKIASSEHMRIG
GSEEMAWLQICEPTEKDKGKYTFEIFDGKDNHHRSLDLSGQAFDEAFAEFQQLKAAAFAE
KNRGKVIGGLPDVVTIMEGKTLNLTCTVFGNPDPEVFWFKNDKDLELSEHFSVKVEQAKY
VSLTIKGVTSEDSGKYSINVKNKYGGEKIDVTVSVYKHGEKIPDVAPPQQAKPKLIPAST
SATAE
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaaggacggggctccagagggaaaactgggctctgctggccaagccggagccc
agggagcttggtgcccagcggccagacctctctcctcggccactcctgcagctgcgagcc
gcgatgtcgctggtgacactgcccttccaccagaagagacacaggcacttcgaccagtcc
taccgcaacatccagaccaggtacctgctggatgagtacgcctccaaaaggagagcgtcc
tcccggtcatctgcccagcggtctctcacgcagcagtcctcggcacagagagcgtctagc
cagacctcgacaggggcgaccacctgccggctctgtgccaagaggctgagcgcgtcggag
gaggaacatgagaaggaaaggaggtaccagtccctggtggctgcctatggagaggccaag
cgggagcgcttcctcagtgagctggcccagctggaggaggacgtgcacctggcgcggtct
caggcccgtgacaagctggacaaatacgccctgcagcagatggtggaggacaagctggcg
tgggagagacacgcctttgaggagcgcgtgagcagggcccccgagatcctggtgcggctg
aggtcccacaccgtctgggagaggatgtccgtgacgctctgcttcaccgtgcagggcttc
cccacgcccgtggtgcaatggtacaaagatggtagtctgatctgccaggccggcgagcca
gggaagtaccggatcgagagcaagtacggggtgcacacgctggagatcaacagggccagc
ttcgatgacactgcgacctactctgcggtggccaccaacgcgcacggacaggtgtcgacc
aacgcggccgtggtggtgagaaggttccggggagacgaggagccgctccactccgtggga
ctcccgattggactgcccctgtcctccgtgatcccctacacacacttcgatgttcagttc
ttggagaaatttggagtcactttcagaagagaaggtgagacgctcacgctcaagtgcacg
ctgctggtgacgccagacctgaagagggtgcagccgcgcgccgagtggtaccgggacgat
gtgctggtgaaagagtcaaagtggaccaagatgttctttggagaaggacaggcctcgctg
tccttcagccacctgaacaaggacgacgagggcctgtacaccctgagaatcgtgtcccgc
ggcggagtcagcgaccacagcgccttcctgtttgtcagagatgccgacccactggtcaca
ggggctcccggagcacccatggacttgcagtgccatgatgcaaaccgagactacgtcatc
gtcacgtggaagccgcccaacaccaccaccgagagcccggtcatcggctacttcgtcgac
cgatgtgaagtgggaactaacaactgggttcagtgcaacgacgcccctgtgaagatctgc
aaataccccgtgacgggacttttcgagggaaggtcgtacgtgttccgcgtgagggccgtc
aatagcgcgggagtcagcagaccgtcccgggtctctgatgctgtggctgcccttgacccc
gctgacctcaggaggttacaagcaattcacctggagggagagaaagagattgtgatctac
caggacgaccttgaaggtgacgttcagatcccgggccctccgtccaacgtgcacgtctcg
gaggtcagcaggacttacgtggtcctcagctgggacccgcccactccccgcggcaaggag
cccttaatgtacttcattgagaagtccgtggttgggagtggcagctggcagcgcgtcaat
gcccagacggccgtgaggtcccctcgatacgccgtcttcgaccttgcagaggggaagtcg
tatgtgttccgtgttttgtcagccaataagcacggcctgagcgatccctcggaaataacg
ccccccatccaggcacaggacaccattgcggtcccttctgcccctggccgggtccttgct
tcccgcaacaccaagacgtctgtcgtggtgcagtgggacaggccgaagcacgaggaggcc
ctgctgggctactacgtggactgctgcgtggcggggactaacctgtgggagccgtgcaac
cacaagcccatcggatacaacaggttcgtggtgcacggcctgaccacgggcgagcagtac
gtcttccgcgtcaaagccgtcaacgccgtgggcaccagcgagaactcccaggagtccgag
gccatcaaggtccaggcggccctcaccgtcccgtcccacccatatgggatcacacttctg
aactgtgatggccacaccatgaccctgggctggaaggtgcccaagttcagcggaggctca
gccatcttgggttattatgtggacaagcgcgaagctcaccacaagaactggcacgaggtc
aactcctctcctgtgcagcagaggatcttaacggtggagggcttggtggaaggctcagcc
tatgagttcaaaatcgctgctgtcaacctggcggggatcggacagccgtcggaccccagc
gagctcttcaagtgtgaggcgtggacagcgccggaacctggtcctgcctacgacctgaca
ttctgtgaggtccggaacacatcactggtcatgctgtggaaggccccagtgtatgcgggc
agcagtcctgtgtctgggtactttgtggattttaaggaagaagattctggagaatggaag
acggtgaatgaagcggcaactccaaatcgttatttgaaggtctgcgacctgcaccagggg
aggacttacgtgttccgcgtgcgggcagtgaatgccagtgggccggggaagccctcggac
atgtcggagccagtgctggtggaggccaggccaggcacgaaggaaatcagcgctggtgtg
gatgaggaaggcaacatctacctggccttcgactgccaggaaatgacagacgcctcccag
ttcacatggtgcaagtcctacgaggagatcgccgacgaggagaagttccgtgtgcacacg
gagggcgaccactcaaggctgtactttaagaatccagataaagtggacgtggggacctat
tctgtgtccgtgagtgacaccgatggcgtgtcctccagtttcgttctggatgaggaagag
cttgaacgtttgatggcgctgagcaatgagatcaagaatcccacgattcctctgaaatca
gaattagcttatgagatttttgataagggccaggttcgcttctggctccaggctgagcag
ttatctccagatgccagcttccgattcgtcattaatgacagagaagtctccgacagcgag
acacacagaattaaatgtgacaaatcaactggaatcattgagatggtgatggatcgattc
accattgagaacgaaggcacctacaccgtgcagattcaggatggaaaagccaaaaaccag
tcttccctggttcttattggagatgctttcaggactgtgctagaagaggctgaatttcag
aggaaggagtttctcaggaagcaaggacctcactttgctgagtacttgcactgggacgtt
acagaggaatgcgaggtccggctggtctgtaaggttgcaaacaccaagaaggaaacagtt
ttcaagtggctcaaggacgatgttctgtatgaaactgagacgttgcctgatctggagaaa
ggggtctgtgagctgctcatcccaaagttgtccaagaaggaccacggtgaatacaaggcg
accttgaaagatgacagaggtcaagacgtgtctacccttgacatagctggcaaagtgtat
gaggacatgatcttggccatgagtcgggtctgtggagcatccgcctctccactgaagata
ctgtgcaccccggaggggatccggctccagtgcttcatgaagtacttcacggaggaaatg
aaggtcaactggtaccacaaagatgctaagatcgcatccagcgagcacatgcggatagga
ggcagtgaggagatggcctggctgcagatctgtgagcccaccgagaaggacaaaggcaaa
tacactttcgagatttttgacggcaaagacaaccatcatcgctcactcgacctgtctgga
caagccttcgacgaggcctttgcagagttccagcaactcaaggctgcggcttttgcagag
aagaatcgcgggaaggtgattggcggcctgcctgatgtggtgaccataatggaaggcaag
accttgaatctgacctgcacggtgtttggaaatcctgaccctgaagtgttttggttcaag
aatgacaaggacctggagctcagcgaacacttctctgtgaaggtggagcaggccaaatac
gtcagcctgaccatcaagggggtgacctctgaggactcagggaagtacagcatcaacgtc
aagaacaaatatggaggagagaagatcgatgttactgtcagtgtgtacaagcacggggag
aagattccggatgtcgcaccaccccagcaagccaaaccgaagctcatccccgcatccacc
tccgcaacagctgaataa
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integrated database retrieval system