KEGG   Sciurus carolinensis (gray squirrel): 124983328
Entry
124983328         CDS       T08117                                 
Name
(RefSeq) high mobility group protein HMGI-C
  KO
K09283  high mobility group AT-hook protein 2
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar05202  Transcriptional misregulation in cancer
ncar05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    124983328
   05206 MicroRNAs in cancer
    124983328
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ncar03000]
    124983328
   03036 Chromosome and associated proteins [BR:ncar03036]
    124983328
Transcription factors [BR:ncar03000]
 Eukaryotic type
  Other transcription factors
   HMGI(Y)
    124983328
Chromosome and associated proteins [BR:ncar03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    124983328
SSDB
Motif
Pfam: AT_hook
Other DBs
NCBI-GeneID: 124983328
NCBI-ProteinID: XP_047406478
LinkDB
Position
4:125041246..125165436
AA seq 109 aa
MSARGEGAGQPSTSAQGQPAAPAPQKRGRGRPRKQQQEPTCEPSPKRPRGRPKGSKNKSP
SKAAQKKAEATGEKRPRGRPRKWPQQVVQKKPAQEETEETSSQESAEED
NT seq 330 nt   +upstreamnt  +downstreamnt
atgagcgcacgcggtgaaggcgccgggcagccgtccacttcagcccagggacaacctgcc
gccccggcgcctcagaagagaggacgcggccgacccaggaagcaacagcaagagccaacc
tgtgagccctcacctaagagacccaggggaagacctaaaggcagcaaaaacaagagtccc
tctaaagcagctcaaaagaaagcagaagccactggagaaaaacgaccacgaggtagaccc
aggaaatggccacaacaagtcgttcagaagaagcctgctcaggaggagactgaagagaca
tcctcgcaagagtccgcggaggaggattag

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