KEGG   Sciurus carolinensis (gray squirrel): 124983333
Entry
124983333         CDS       T08117                                 
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein kinase TBK1-like
  KO
K05410  TANK-binding kinase 1 [EC:2.7.11.10]
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04014  Ras signaling pathway
ncar04137  Mitophagy - animal
ncar04140  Autophagy - animal
ncar04620  Toll-like receptor signaling pathway
ncar04621  NOD-like receptor signaling pathway
ncar04622  RIG-I-like receptor signaling pathway
ncar04623  Cytosolic DNA-sensing pathway
ncar04657  IL-17 signaling pathway
ncar04936  Alcoholic liver disease
ncar05014  Amyotrophic lateral sclerosis
ncar05022  Pathways of neurodegeneration - multiple diseases
ncar05135  Yersinia infection
ncar05160  Hepatitis C
ncar05161  Hepatitis B
ncar05162  Measles
ncar05163  Human cytomegalovirus infection
ncar05164  Influenza A
ncar05165  Human papillomavirus infection
ncar05167  Kaposi sarcoma-associated herpesvirus infection
ncar05168  Herpes simplex virus 1 infection
ncar05169  Epstein-Barr virus infection
ncar05170  Human immunodeficiency virus 1 infection
ncar05171  Coronavirus disease - COVID-19
ncar05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04014 Ras signaling pathway
    124983333
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    124983333
   04137 Mitophagy - animal
    124983333
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    124983333
   04621 NOD-like receptor signaling pathway
    124983333
   04622 RIG-I-like receptor signaling pathway
    124983333
   04623 Cytosolic DNA-sensing pathway
    124983333
   04657 IL-17 signaling pathway
    124983333
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    124983333
   05161 Hepatitis B
    124983333
   05160 Hepatitis C
    124983333
   05171 Coronavirus disease - COVID-19
    124983333
   05164 Influenza A
    124983333
   05162 Measles
    124983333
   05168 Herpes simplex virus 1 infection
    124983333
   05163 Human cytomegalovirus infection
    124983333
   05167 Kaposi sarcoma-associated herpesvirus infection
    124983333
   05169 Epstein-Barr virus infection
    124983333
   05165 Human papillomavirus infection
    124983333
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    124983333
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    124983333
   05022 Pathways of neurodegeneration - multiple diseases
    124983333
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    124983333
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    124983333
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:ncar01001]
    124983333
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncar04131]
    124983333
Enzymes [BR:ncar01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.10  IkappaB kinase
     124983333
Protein kinases [BR:ncar01001]
 Serine/threonine kinases: Other
  IKK family [OT]
   124983333
Membrane trafficking [BR:ncar04131]
 Autophagy
  Xenophagy
   Other xenophagy associated proteins
    124983333
SSDB
Motif
Pfam: TBK1_CCD1 Pkinase TBK1_ULD PK_Tyr_Ser-Thr Pkinase_fungal ABC1 CEP63 Kinase-like DUF713
Other DBs
NCBI-GeneID: 124983333
NCBI-ProteinID: XP_047406487
LinkDB
Position
4:123838806..123881017
AA seq 730 aa
MQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLK
KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVV
GGMNHLRENGIVHRDIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYL
HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG
KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA
ETSDILHRMIIHVFSLQQMTAHKIYIHSYNTATVFHELVYKQTKIISSNQELIYEGRRLV
LEPGRLAQHFPRTTEENPIFVVSREPLSTIGLIYEKISLPKVHPRYDLDGDASMAKAITG
VVCYACRIASTLLLYQELMRKGIRWLIELVKDDYNETVHKKTEVVITLDFCIRNIEKTVK
VYEKLMKINLEATELGEISDIHTKLLRLSSSQGTIETSLQDIDSRLSPGGLLTDAWAHQE
GTHPKTESSVEKLQVLLNCITEIYYQFXKDKAERRLAYNEEQIHKFDKQKLYYHATKAMT
HFADECVKKYEAFFDKSEEWMRKMLHLRKQLLSLTNQCFDIEEEVSKYQDYTNELQETLP
QKMFAASSGIKHTITPIYPSSNTLVEMTLGMKKLKEEMEGVVKELAENNHILERFGSLTM
DGGLRNVDCL
NT seq 2193 nt   +upstreamnt  +downstreamnt
atgcagagcacttctaatcatctgtggcttttatctgatatcttaggccaaggagctaca
gcaaatgtctttcgtggaagacataagaaaactggtgatttatttgctatcaaagtattt
aataacataagcttccttcgcccagtggatgttcaaatgagagaatttgaagtgttaaaa
aaacttaatcacaaaaatattgtcaaattatttgctattgaagaggagacaacaacaaga
cataaagtactcattatggaattctgtccatgtgggagtttatacactgttttagaagaa
ccatctaatgcctatggactgccagaatcagaatttttaattgttttacgagatgtggtg
ggtggaatgaatcaccttcgggaaaatggaatagtgcatcgtgatatcaagccaggaaat
atcatgcgtgtcataggggaagatggacagtctgtgtacaaacttacagattttggtgca
gctagagaattagaagatgatgagcagtttgtttctctgtatggtacagaagaatatttg
catcctgatatgtatgaaagagcagtgctaagaaaagatcatcaaaagaaatatggagca
acggttgatctttggagcattggggtaacattttaccatgcagctactggatcattacca
tttagaccatttgaaggacctcgcaggaataaagaagtgatgtataaaataatcactgga
aagccttctggtgcaatatctggagtacagaaagcagaaaatggaccaattgattggagt
ggagacatgcctgtttcttgtagtctttctcggggtcttcaggttctacttacccctgtt
cttgcaaacatccttgaagcagatcaggaaaaatgttggggttttgaccagttttttgca
gaaactagtgatatacttcatcggatgataattcatgttttttcactacaacaaatgaca
gctcataagatttatattcatagctataatactgctacagtatttcatgaactggtatat
aaacaaaccaaaattatttcttcaaatcaagaacttatctatgaaggacgacgcttagtc
ctagaacctggaagactggcacagcatttccctaggaccacagaggaaaatcctatcttt
gttgtaagccgggaacccctgagtacgataggactaatatatgaaaaaatttccctccct
aaagtacatccacgttatgatttagatggggatgctagcatggctaaggcgataacaggg
gttgtatgttatgcctgtagaattgccagtaccttgctgctttatcaggaattaatgcga
aaagggatacgatggttgattgaattagttaaagacgattacaatgaaactgtacacaaa
aagacagaagttgtgatcacattggatttctgcatcagaaacattgaaaaaactgtaaaa
gtatatgaaaagttgatgaagatcaacctagaagcaacagagttaggtgaaatttcagac
atacacaccaaattgttgagactttccagttcccagggaacaatagaaaccagtcttcag
gacatcgacagcaggttatctccaggtggactgctgacagatgcgtgggcacatcaggaa
ggcacccatccaaagacagaaagtagtgtagaaaaacttcaagtcctgttaaactgcatc
acggaaatttactatcagttcnaaaaagacaaagcagaacgtagactagcttacaatgaa
gaacaaatccacaaatttgataagcaaaaactgtattaccatgcaacaaaagctatgacc
cattttgcagatgaatgtgttaaaaagtatgaagcattttttgataagtcagaagaatgg
atgagaaagatgcttcatcttaggaaacagttattatctctgactaatcagtgttttgat
attgaagaagaagtatcaaagtatcaagactatactaatgagttacaagaaactctgcct
cagaaaatgtttgcggcctccagtggaataaaacataccataaccccaatctatccaagt
tctaacaccttagtggaaatgactcttggtatgaagaaattgaaggaagaaatggaaggg
gtggttaaagaacttgctgaaaataatcatattttagaaaggtttggttctttaaccatg
gatggtggcctacgcaacgttgactgtctttag

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