Sciurus carolinensis (gray squirrel): 124983350
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Entry
124983350 CDS
T08117
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03040
Spliceosome
ncar05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124983350
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124983350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124983350
03041 Spliceosome [BR:
ncar03041
]
124983350
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124983350
mRNA cycle factors
Common to processing body (P body) and stress granule
124983350
Spliceosome [BR:
ncar03041
]
Common components
Common spliceosomal components
hnRNP proteins
124983350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
124983350
NCBI-ProteinID:
XP_047406518
LinkDB
All DBs
Position
4:118047171..118048187
Genome browser
AA seq
320 aa
AA seq
DB search
MSKSESPKEPEQLRKLFIGGLSFETSDESMRSHFEQWGTLTDCVVMRDPNTKCSRGFGFV
TYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFVDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGS
GDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKCGNFGGRSSGPYGGGGQYFAKPR
NQGGYGGSSSSSSYGSGRRF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaatcagagtcccctaaagagcctgaacagctgcggaagctattcatcggaggg
ctgagctttgaaacaagtgatgagagtatgagaagccattttgagcaatggggaacactc
acggactgtgtggtaatgagagacccaaacaccaagtgctccaggggctttgggtttgtc
acttatgccactgtggaggaagtggatgcagccatgaatgcaagacctcacaaggtggat
ggaagagtcgtggaaccaaagagagctgtctcaagagaagattctcaaagaccaggggcc
cacttaactgtgaaaaagatctttgttggtggcattaaagaagacactgaagaacatcat
ctacgagattattttgaacagtatgggaaaattgaagttattgaaatcatgactgacaga
ggcagtggaaagaaaaggggctttgcttttgtaacttttgtcgaccatgactctgtggat
aagattgtcattcagaaataccatactgtgaatggccacaactgtgaagtgaggaaagcc
ctgtcaaagcaagagatggctagtgcttcatctagtcaaagaggtcgaagtggttctgga
aactttggtggtggtcgcggaggtggttttggtggaaatgacaattttggtcgtggagga
aacttcagtggtcgtggtggctttggtggcagccgtggtggtggtggatatggtggcagt
ggggatggctacaatggatttggtaatgatggaagcaattttggaggtggtggaagctac
aatgattttggcaattacaacaatcagtcatcaaattttggacccatgaagtgtggaaac
tttggaggcagaagctctggaccttatggtggtggaggccaatactttgccaaaccacga
aaccaaggtggctatggcggttccagcagcagcagtagctatggcagtggcagaaggttt
taa
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integrated database retrieval system
