Sciurus carolinensis (gray squirrel): 124983353
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Entry
124983353 CDS
T08117
Name
(RefSeq) integrator complex subunit 9 isoform X1
KO
K13146
integrator complex subunit 9
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124983353
Spliceosome [BR:
ncar03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
124983353
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GFIT
Motif
Pfam:
IntS9_C
Lactamase_B_6
Beta-Casp
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
124983353
NCBI-ProteinID:
XP_047406528
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Position
4:9514579..9620139
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AA seq
659 aa
AA seq
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MKLYCLSGHPTLPCNVLKFKSTTIMLDCGLDMTSTLNFLPLPLVQSPRLSNLPGWSLKDG
NAFLDKELKECSGHVFVDSVPEFCLPETELIDLSTVDVILISNYHCMMALPYITEHTGFT
GTVYATEPTVQIGRLLMEELVNFIERVPKAQSASLWKNKDIQRLLPSPLKDAVEVSTWRR
CYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGS
SLLTTHPQPMDQASLKNSDVLVLTGLTQIPTANPDGMVGEFCSNLALTVRNGGNVLVPCY
PSGVIYDLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEP
PFPHAELIQTNKLKHYPSIHGDFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTV
IFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPP
AQSHRVDLMIDCQPPAMSYRRADVLALPFKRRYEKIEIMPELADSLVPMEIKPGISLATV
SAVLHTKDNKHVLQPPPRPAQPTSGKKRKQRVSEDVPDCQVLKPLLSGSIPVEQFVQTLE
KHGFSDIKVEDTAKGHIVLLQEAETLIQIEEDSTHIICDNDEMLRVRLRDLVLKFLQKF
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtattgcttgtcgggtcacccaaccttaccatgcaatgtgctgaaattcaaa
tcaaccaccattatgttggactgtggactggatatgacttccaccctcaatttccttcct
ttgccacttgttcaaagtcccaggctgtctaatcttcctggctggtccctgaaggatgga
aatgctttcttggacaaggagctgaaggagtgctcaggtcatgtatttgtggattctgtg
cctgaattctgtttaccagagactgagctaatagacctgtctacagtagatgtgattctc
atctcaaactatcactgcatgatggcgctgccctacatcactgagcacaccggattcaca
ggcacagtgtatgccacagaacccactgttcagatcggcaggcttcttatggaagaactg
gtgaatttcattgaaagagtgccaaaggctcagtctgcctccttgtggaagaataaggac
atacaacgactcctgccttctcctctcaaggatgctgtggaagtgtcaacctggagaaga
tgctacacaatgcaggaggtgaactctgcccttagcaaaatccagctggtgggatattct
cagaaaatcgagctgtttggtgctgtccaggtaactcctctgagctctggctatgccctt
ggaagttccaactggattatccagtcccattatgagaaagtttcttacgtctctggatct
tccttgcttactacacaccctcagcccatggaccaagcttctctgaaaaacagcgatgtg
ctggttttgacaggacttacccagatccccactgcaaaccctgatggcatggtcggagag
ttctgcagcaacctggctctcacagttcggaatggaggaaatgtgttggtcccctgctac
ccttctggagtgatctatgacctcctggaatgcctgtatcagtacattgactcagctggc
ctctccaatatccccttctacttcatctccccggtggcaaacagttcacttgaattctcc
cagatttttgctgagtggctttgtcataacaaacagagtaaggtgtatctcccagaacca
ccttttcctcatgcagagctcattcagaccaataagctgaagcactaccccagcatccat
ggagactttagcaacgacttcagacagccttgtgtggtgttcactgggcacccctccctc
cggtttggagatgtggtccacttcatggagctctggggaaaatctagtctcaacactgtc
atatttacagaaccagacttctcatacctggaagcactggctccttaccagcccttggcc
atgaaatgcatatactgccccattgatacacgactaaatttcatccaggtgtcaaagctg
cttaaagaagtgcagcccctgcatgtggtctgccctgagcagtacacccagccgccccca
gcccagtcacacagggtggacctcatgatcgactgccagcccccagccatgtcctaccgt
cgggccgacgttctcgccctgcccttcaaacgtcgatatgagaagatcgaaatcatgccg
gagctcgcagactccctggtgcccatggaaatcaagcctggcatctccttggcaaccgtc
tcagctgtgctgcacactaaagataacaagcacgtgcttcagccccctcccaggcctgcc
cagcccaccagcggcaaaaagagaaagcagcgggtgagtgaggatgttccagactgccag
gtgctgaagcctctgctgagcggctccatccctgtagagcagtttgtgcagacgctggag
aagcatggcttcagtgatattaaggtggaagacacagccaagggccatattgttctgctc
caggaagctgagacactcatccaaattgaagaagattcaacccacatcatttgtgacaat
gacgagatgctgagggtgcgactgcgggatcttgtcctcaaattcttacagaagttctga
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