Sciurus carolinensis (gray squirrel): 124983395
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Entry
124983395 CDS
T08117
Name
(RefSeq) PR domain zinc finger protein 4 isoform X1
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04722
Neurotrophin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
124983395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124983395
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
124983395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
Zn_ribbon_PRDM4
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_16
SET
zf-met
zf-C2H2_jaz
Zn_ribbon_Com
PyrI_C
Motif
Other DBs
NCBI-GeneID:
124983395
NCBI-ProteinID:
XP_047406593
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All DBs
Position
4:complement(162651343..162675386)
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AA seq
808 aa
AA seq
DB search
MHHRMNEMNLSPVGMEQLTSSSVSNALPVSGSHLGLAASPTHSAIPAPGLPVAIPNLGPS
LSSLPSALSLMLPMGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRTILPGILSYLADRP
PPQYIHPNSINVDGNTALSITNNPSALDPYQSNGNVGLEPGIVSIDSRSVNTHGAQSLHP
SDGHEVALDTTITMENVSRVTSPISTDGMAEELTMDGVAGEHSQIPNGSRSHEPLSVDSV
SSNLAADTVGHGGVIPIHGNGLELPVVMETDHIASRVNGMSDSALSDSIHTVAMSTNSVS
VALSTSHNLASLESVSLHEVGLSLEPVAVSSITQEVAMGTGHVDVSSDTLSFVPPSLQME
DSNSNKENMATLFTIWCTLCDRAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLILRQSI
VGAEVVGVRPLIGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKMYHNGVLE
FCIITTDENECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSQDIPPEHELLFYYSRDYA
QQIGVPEHPDVHLCNCGKECNSYSEFKAHLTSHIHNHLPSQGHSSNHGPGHSKERKWKCS
MCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDK
SFTQKAHLESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCDKLFLR
TNHLKKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAQEEEEEEDSEEE
DLADSVGTEDCRINSAMFSPDDSLSAHK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacaggatgaatgaaatgaacctgagcccagtggggatggagcagctgacttca
tcctctgtgagcaatgccttgccagtctcaggaagccacctggggttggctgcctcgccc
actcacagtgccatccctgcccccggtctgccagtggcgattccaaacttgggtccctcc
ctgagctctttgccttctgctttgtctctgatgctcccaatgggtattggggatcgaggg
gtgatgtgtgggttacctgaaagaaactataccctacctccaccaccttaccctcacctg
gagagcagttacttcagaaccattctacctggcattttatcttatttagctgacagacca
cctcctcagtatatccacccgaactctataaatgttgatggtaatacagcattgtctatc
accaataacccatcagctctcgatccctaccagtccaatggaaatgtcggattagaacca
ggcattgtttcaatagactctcgttctgtgaacacacacggtgcccaaagccttcatcct
agtgatggccatgaggtggctttggacacaacaatcaccatggagaacgtttccagagtt
accagcccaatctctacagatggaatggcagaggagcttacaatggacggtgttgcaggc
gagcattcccagatcccaaacggctccagaagtcatgaacctctctctgtggattctgtg
agcagcaaccttgcagcagacactgtaggacatggtggtgtgatacccattcatgggaat
ggcctggaactccctgtggtcatggaaacagaccacattgcaagtcgtgtcaacgggatg
tctgatagtgctctcagtgattccatccacactgtggccatgagcaccaactctgtaagc
gtggcactctctacctcacacaatctcgcctccctagaatctgtttccctccatgaagtt
ggcctcagcctagaacctgtggctgtctcctccatcactcaggaggttgctatgggtaca
ggtcatgtagatgtatcttcagacactctttcttttgtaccaccttcactgcaaatggaa
gactccaattcaaacaaggaaaacatggcaactttgtttacaatttggtgcactctttgt
gaccgagcctatccttcagattgccctgaccatggacccgtgacttttgttcctgatact
ccaatagagagcagagcaagactttctctcccaaagcagctcattctccgccagtcaatt
gtgggagcagaagttgttggtgtccgtccactgataggtgtatggactggagaaaccatt
cctgtgcgcacctgctttgggcctcttattggtcagcagagtcactccatggaagtagca
gagtggacagacaaggctgttaaccatatctggaagatgtaccacaatggtgtcctcgaa
ttctgcatcattacaactgacgaaaatgaatgtaattggatgatgtttgtgcgcaaagcc
aggaatcgggaagagcagaatttggtggcttatccccatgatggaaaaatttatttctgc
acctcacaagacatccctcctgaacatgaactgcttttctattatagccgggattatgct
cagcagattggtgttcctgaacacccagatgtacacctctgtaactgtggcaaggagtgc
aattcctattcagagttcaaagctcatctgaccagccacatccataatcatctccctagc
cagggccacagcagcaaccatgggccaggccacagcaaagaaagaaagtggaagtgctca
atgtgcccccaagcttttatctctccttctaaactacatgtccacttcatgggtcatatg
ggcatgaagccccacaagtgtgacttctgtagcaaggctttcagtgatccaagcaatctg
cggacccacctcaagatacacacaggtcagaagaactataggtgtactttgtgtgacaag
tctttcacccagaaggctcacctggaatcgcacatggtcatccacacgggtgagaagaat
ctgaagtgtgattactgtgataagctgtttatgcgcaggcaggacctcaagcagcatgtg
ctcatccacacacaagaacgccagatcaagtgtcccaagtgcgataagctgttcttgaga
acaaatcacttgaagaagcatctcaattctcatgaaggaaagcgggattatgtctgtgaa
aaatgcacaaaggcgtatctaaccaaataccatcttacccgccatctgaaaacctgtaaa
ggacccacctccagttcctcagcacaagaggaagaggaggaggaggactctgaggaggaa
gatctggcagactctgtggggacagaagactgtaggattaacagtgctatgttttcacca
gatgactctctctcagctcataaataa
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