Sciurus carolinensis (gray squirrel): 124983415
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Entry
124983415 CDS
T08117
Name
(RefSeq) TBC1 domain family member 15 isoform X1
KO
K20168
TBC1 domain family member 15
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124983415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124983415
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
124983415
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
YddI
Motif
Other DBs
NCBI-GeneID:
124983415
NCBI-ProteinID:
XP_047406628
LinkDB
All DBs
Position
4:130534804..130595134
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AA seq
690 aa
AA seq
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MAAAGVVSGKVIYEQEGVYIHSSCAKTSDQDSLISGILRVLEKDAEVIVDWRPLDDALDS
SSILYAGKDSSSVVEWTQTPKERPHRGSEHLNSYEAEWDMVNTVSFKKKPHTNGDAPSHR
NGKSKWSFLFSLTDLKSIKQNKEGMGWTYLVFCLKDDVVLPALHFHQGDSKLLIESLEKY
VVLCESPQDKRTLLVNCQNKSLSQSFENLLDEPAYGLIQARLLDRRKLLWALHHWKKIKK
DPYTATMVGFSKVTNYIFDSLRGSDPSTHQRPPSEMADFLSDAIPGLKINQQEEPGFEVI
TRIDLGERPVVQRREPVSLEEWSKNIDSEGRILNVDNMKQMIFRGGLSHSLRKQAWKFLL
GYFPWESTKEERTQLQKQKTDEYFRMKLQWKSVSEEQEKRNSRLRDYRSLIEKDVNRTDR
TNKFYEGQDNPGLILLHDILMTYCMYDFDLGYVQGMSDLLSPLLYVMENEVDAFWCFASY
MDQMHQNFEEQMQGMKTQLIQLSTLLRLLDSGFCSYLESQDSGYLYFCFRWLLIRFKREF
SFLDILRLWEVIWTELPCKNFHLLLCCAILESEKQQIMEKHYGFNEILKHINELSMKIDV
EDILCKAEAISLQMVKCKELPQAVCEILGLQDSEVTTPDSDTGEDENVGMTRPSSAFHSN
TLPTLAASGARDESPTHISVSPNVSRLTPA
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgggtgttgtgagcgggaaggttatatatgaacaggaaggggtatatatt
cactcatcctgtgcaaagaccagtgaccaagacagcttaatttcaggaatattacgtgtt
ttagaaaaggatgctgaagtaatagtggactggagaccattggatgatgcattggattct
tctagtattctctatgctggaaaggactccagttcagtagtagaatggacccagacccca
aaagaaagacctcatcgaggatcagaacatctgaacagttatgaagctgagtgggatatg
gttaatacagtttcatttaaaaagaaaccacataccaatggagatgctccaagtcataga
aatgggaaaagcaaatggtcattcctgttcagtttgacagacctgaaatcaatcaagcaa
aacaaagagggtatgggctggacgtatttggtattctgtctaaaggatgacgtcgttctc
cctgctctgcactttcatcaaggagatagcaaactactgattgaatctcttgaaaaatat
gtggtattatgtgaatctccacaggataaaagaacacttcttgtgaattgtcagaataaa
agtctttcacagtcttttgaaaatcttcttgatgaaccagcatatggtttaatacaagca
agactgctagacagaagaaagctgttgtgggcccttcaccactggaaaaaaattaaaaag
gatccatatacagcaactatggtaggattttccaaagtgacaaactacatttttgatagt
ttgagaggcagtgatccctctacacaccaacgaccaccttcagaaatggcagatttcctt
agtgatgctattccaggcctaaaaataaatcagcaagaagaaccaggatttgaagtcatc
acaagaattgacttgggagaacgccctgttgttcaaaggagagagccagtatcactggaa
gaatggtctaagaacattgattccgaaggaagaattttaaatgtagataatatgaagcag
atgatatttagagggggtcttagccattctttgagaaagcaagcatggaaattccttctg
ggatattttccttgggaaagtaccaaggaggaaaggactcaattacaaaagcaaaaaact
gatgaatacttcaggatgaaactacagtggaaatctgtcagcgaggaacaagagaagaga
aattcgaggttaagagattatagaagtcttatcgaaaaggatgttaacagaacagatcga
acaaacaaattttatgaaggtcaagataatccagggttgattttgcttcatgacattttg
atgacctactgtatgtacgattttgatttaggctatgtgcagggaatgagtgatttactt
tctcctcttttgtatgtgatggaaaatgaagtagatgccttttggtgctttgcctcttac
atggaccaaatgcatcaaaattttgaagaacaaatgcaaggcatgaagacccagttaatt
cagctgagtaccttactgcgattattggacagtggattttgcagttacttagaatctcag
gactctggatatctatatttttgcttcagatggcttttaattagatttaaaagggaattt
agttttctggacattcttcgattatgggaggtaatatggactgaactgccatgtaaaaat
ttccatcttcttctctgttgtgctattttggaatctgaaaagcagcaaataatggaaaaa
cattatggcttcaatgaaatacttaagcatatcaatgaattgtccatgaaaattgatgtg
gaagatatactgtgcaaggcagaagcaatttctctacagatggtgaaatgcaaggaattg
cctcaagcagtttgtgagatcctaggacttcaggacagtgaagtaacaacaccagattca
gatactggtgaagatgaaaatgttggcatgactcgtccttcatctgcatttcatagtaac
accttgcctacccttgctgctagtggagccagagatgagagtccaacacacatatcagtg
tccccaaatgtcagcagattaacacctgcatga
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