Sciurus carolinensis (gray squirrel): 124983460
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Entry
124983460 CDS
T08117
Name
(RefSeq) nuclear pore complex protein Nup50-like
KO
K14295
nuclear pore complex protein Nup50
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03013
Nucleocytoplasmic transport
ncar05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124983460
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124983460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124983460
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124983460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
VCPO_N
Motif
Other DBs
NCBI-GeneID:
124983460
NCBI-ProteinID:
XP_047406713
LinkDB
All DBs
Position
4:172568295..172590549
Genome browser
AA seq
468 aa
AA seq
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MAKRIAEKELTDRNWDQEDEAEEVGTFSVASEEVLKNRAIKKAKRRNVGSESDSGGAFKG
FKGLVVPSGGGGFSGFGSSPGGKPLEGLSNGNGTSAPPFTGSRAAAEPKATFGSFVTNGP
AALVDKKIPDPKTNGNGQQPSSSGLASSTACAGSTYHKQLAALNCSVRDWIVKHVNTNPL
CDLTPIFKDYENYLATIEQQHENSGGGSSGSETNRLSVDAQPPSLFGSTKLQQESTFLFH
GNKTEDTSEKKIEVVLEKKTDTAPEAASVSFNFGKKIDSSVLGSLSSGPSTGFSFSPGNS
SLFGKDITQSKPVSSPFSAKTLEGQTEGGSNECKGGDEEESDEPPKVVVTEVKEEDAFYS
TKCKLFYKKDNEFKEKGVGTLHLKPTVSRKTQLLVRADTNLGNILLNVLIPPNMPCTRTG
KNNVLIVCIPNPPLDEKSATVPVTMLIRVKTSEDADELHRILLEKKGA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaattgccgagaaggagttgacagatagaaattgggaccaagaagatgaa
gctgaagaggtgggaacgttctccgtggccagtgaggaggtcttgaagaacagagccata
aaaaaagccaagcggagaaatgttggatctgaatccgacagtggaggagccttcaaaggt
tttaaaggcttggttgtgccttctggaggcggagggttttctggatttggtagtagccct
ggagggaagcctctggaaggactgtcaaatggaaacggcactagtgcccctcccttcact
ggttcaagggcagcagcagagcccaaagcaacctttggttcttttgttacaaatggccct
gctgccttggtggataaaaagattccagatcccaaaaccaatggcaacggtcagcagccc
tcatcctccggccttgcttcaagcacagcctgtgcagggagcacctaccacaaacagctg
gctgctttgaactgctcggttcgggactggatagtgaagcatgtgaacacaaatcccctg
tgtgacctgacacccatctttaaggactatgagaactacctagccaccattgagcagcag
cacgagaacagtggtggcggaagctctggaagcgaaacgaacaggctgtcagttgacgcg
cagcccccttccctgtttgggtccacaaaactacaacaagagtcaacatttttatttcat
ggcaacaaaaccgaggacacctctgagaagaagatagaggttgtgttggaaaagaagacc
gacacagcaccagaagcagcgagtgtctcatttaattttggcaagaaaattgatagctcc
gttttgggctcattaagctctggtccttcaactggattttcattttcccctggaaactcc
agtttatttggcaaagatattacccagagtaaaccagtttcttcaccattttctgctaaa
acattggagggtcaaacagaaggtggcagtaatgaatgcaaaggtggagatgaagaggag
agtgatgagcctcccaaggtggtggttactgaagtgaaggaggaagatgctttctactcc
accaagtgtaaactgttttacaagaaagacaacgaatttaaagagaagggtgtgggtacc
ctgcatttaaaacctacagtgagccggaagacgcagctcttggtgcgggctgataccaat
ctaggcaatatattgttgaatgttttgattccacccaatatgccatgtacccgaacaggg
aaaaataacgtacttattgtctgcattccaaacccgccactcgacgagaagagcgccacc
gtccctgtcaccatgttgattcgggtgaaaactagcgaggatgcagatgagttgcacaga
attttactggagaaaaagggtgcctga
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