Sciurus carolinensis (gray squirrel): 124983543
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Entry
124983543 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: protein O-mannosyl-transferase TMTC1-like
KO
K23424
protein O-mannosyl-transferase [EC:2.4.1.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncar01003
]
124983543
Glycosyltransferases [BR:
ncar01003
]
O-Glycan biosynthesis
O-linked Man type
124983543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_8
TPR_16
TPR_11
TPR_19
TPR_12
TPR_17
TMTC_DUF1736
TPR_10
TPR_7
TPR_CcmH_CycH
TPR_15
TPR_9
TPR_Slam
TPR_MalT
ARM_TT21_C
HAT_PRP39_C
FAT
ANAPC3
TPR-S
NatA_aux_su
ARM_TT21_4th
HAT_Syf1_CNRKL1_C
TPR_3
ARM_TT21_N
HAT_PRP39_N
DUF7017
ChAPs
HAT_Syf1_CNRKL1_N
TPR_5
ARM_TT21_5th
Suf
Mad3_BUB1_I
BTAD
Wzy_C_2
ARM_TT21_2nd
EF-hand_2
Alkyl_sulf_dimr
Motif
Other DBs
NCBI-GeneID:
124983543
NCBI-ProteinID:
XP_047406862
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All DBs
Position
4:complement(95603771..95857350)
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AA seq
942 aa
AA seq
DB search
MVVTTSARGGGDRAPSRQPGSGLAPAGAAALLAGASCLCYGRSLQGEFVHDDVWAIVNNP
DVRPGAPLRWGIFTNDFWGKGMAENTSHKSYRPLCVLTFKLNIFLTGMNPFYFHAVNVIL
HCLVTLVLMYTCDKTVFKNRGLAFVTALLFAVHPVHTEAVAGIVGRADVLACLLFLLAFL
SYNRSLDQCCAGDCFPPTASPFFLLLSLFLGTCAMLVKETGITVFGVCLVYDLFSLSHKQ
DMSSNGVIHRHSPQQPRSPQPSSLPAHPHPENGKQRFPHKGAWSGCHSPLPPEPKSSGFP
VSPRAVWSLMRHLTTSSNRNFLLTMRPFLKRAVLVISYVVVILYFRLWIMGGSMPLFSEQ
DNPASFSPYILTRFLTYSYLLAFNVWLLLAPVTLCYDWQVGSIPLVETIWDMRNLATILL
AVVMTLLSLHCLTAFKRLEHKEVLVGLLFLVFPFIPASNLFFRVGFVVAERVLYTPSMGY
CILFVHGLSKLCTWLNRCGATTLIVSTVLLLLLFSWKTVKQNEIWLSRESLFRSGVQTLP
HNAKVHYNYANFLKDQGRNREAIYHYRTALKLYPRHASALNNLGTLTRDTAEAKMYYQRA
LQLHPQHNRALFNLGNLLKSPEKKEEAITLLKDSIKYXPEFADAYSSLASLLAEQERFKE
AEEIYQAGIKNCPDSSDLHNNYGVFLVDSGSPEKAVAHYQQAIRLSPSHHVAMVNLGRLY
RSLGENGMAEEWYKRALQVARKTEILSPLGALYYNTGRYEEALQIYREAAALQPSQRELR
LALAQVLAVMGQTKEAEKMTSHIVSEETGCLECYRLLSAIYSKQEHHDKALDAIDKALQL
KPKDPKVVSELFFTKGNQLREQNLLDKAFESYRAAVALNPDQAQAWMNMGGIQHIKGNYV
SARAYYERALQLVPDSKLLKENLAKLDRLEKRLQEVREKDQT
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgaccacctctgcccgaggcggcggggaccgcgcgccctcccggcagccgggc
tccgggcttgcgccggccggggccgcggcgttgctggcgggggccagctgcttgtgctac
ggccgctccctgcagggcgagttcgtgcacgacgacgtgtgggcgatcgtgaacaacccc
gacgtgcggccgggtgccccgctccgctggggcatcttcacaaacgacttctggggcaag
ggcatggccgagaacaccagccacaagtcctaccggccgctctgcgtcctcaccttcaag
ctaaacatatttttgactggcatgaacccattttactttcatgcagtaaatgtaatttta
cactgcttagtgaccctcgtgctgatgtacacctgtgataaaaccgtgttcaagaaccgc
ggacttgcttttgttacagcattactttttgctgtgcatcctgttcacacggaggcggtg
gctggtattgttggcagagctgacgtgttagcgtgtctcctgttcctgctggcctttctc
tcctacaataggagtctggatcagtgttgtgctggggactgtttccctcccactgcttct
cccttcttcttgctgctgagtttgtttctggggacctgcgcgatgctggtgaaagagacg
ggaatcaccgtgtttggagtgtgcttggtttatgaccttttttccctctcccacaagcaa
gacatgtcgagcaacggggtcatccatcggcacagcccacagcagcctcggagtccccag
ccctcctcactgccagcccaccctcacccggagaacgggaagcagcggttccctcacaaa
ggagcttggagtggctgtcattccccactgccaccagaacccaagagcagtggattcccg
gtatctccgcgagctgtgtggtctctaatgaggcatctgacaacaagcagcaatagaaat
ttcctgcttaccatgagaccatttttaaaaagggctgttttggtcataagttatgtggtt
gtcattttgtacttccgtctgtggataatgggaggatccatgcccctattttcagagcag
gataatccagcttcattttcgccttatattcttacaagattccttacttattcctacctc
ttggccttcaatgtgtggcttctgcttgcacctgttaccctgtgctatgactggcaggtg
ggcagtattcctctagtagagaccatctgggacatgaggaacttagccaccatccttctg
gcagttgtgatgaccttgttgagcttacactgcctaactgccttcaagagactggagcac
aaggaagttttagtgggcttgttgttcctggtgttcccgttcattccagccagcaatctc
ttcttcagggtgggttttgtggtggcggagagagtcctttacacgcctagcatgggatac
tgcatcctttttgtgcatggattgagcaagctctgcacttggctaaatcgatgtggggcc
accaccctaattgtgtccacagtgttgctgctgttgcttttctcttggaaaactgtgaaa
cagaatgaaatttggctatcaagagagtccctattcaggtcgggagttcagactctgccc
cacaatgccaaggttcattacaactatgccaatttcctgaaggaccaaggtcggaaccgg
gaagccatctaccactacagaacagccctcaagttgtatccacggcatgcaagtgccctg
aacaaccttggaacactgacgagagacacagcagaggcaaagatgtactatcagagggct
ctccagctccacccgcagcacaaccgggctcttttcaatcttgggaatctccttaagtcc
ccggagaagaaagaagaagctatcactcttctgaaggattccattaaatacnggccagag
tttgcagatgcatattcaagcttagcttcgttattggctgagcaggaaagatttaaggaa
gctgaagaaatataccaggcaggaataaagaactgtccagacagctcagacttacacaac
aactatggagttttcttagttgactctggctctccagagaaagcagtggcccattaccaa
caggccattagacttagcccaagtcatcatgtggccatggtgaacctgggcagactctac
aggtcactgggagagaacggcatggccgaagaatggtacaaacgtgctctgcaggtggca
cgcaaaactgagatactgtcgcctctgggagcactctactacaacactggccgctatgag
gaggctttgcagatttaccgggaagctgcagcacttcagccttcgcagagggagctccgt
ctggcactggctcaggttttggctgtgatgggtcagacgaaagaagctgaaaagatgacc
agtcacatagtgtcagaagagaccggatgccttgagtgctaccgcctcttgtcagcaatc
tacagcaagcaggagcaccacgacaaggcactcgatgctatagacaaggctctccagctg
aaaccaaaggacccaaaagttgtatctgaactttttttcacaaaaggaaaccaactaaga
gagcagaaccttcttgacaaagcttttgagagctatagagcagccgtggcactaaatcca
gatcaagcacaggcctggatgaacatgggtggaattcagcacatcaagggaaactatgtg
tctgcaagagcttattatgagagagctttacagctggttccagacagcaaactgctgaag
gaaaatctcgccaaattggatcgcctagaaaaacgattacaggaagttcgagaaaaggat
caaacgtag
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