KEGG   Sciurus carolinensis (gray squirrel): 124983610
Entry
124983610         CDS       T08117                                 
Name
(RefSeq) protein NEDD1
  KO
K16547  protein NEDD1
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ncar03036]
    124983610
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ncar04812]
    124983610
Chromosome and associated proteins [BR:ncar03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     124983610
   Microtubules and associated factors
    gamma-tubulin ring complex
     124983610
Cytoskeleton proteins [BR:ncar04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     124983610
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_EML_2 WD40 Beta-prop_WDR36-Utp21_1st WD40_WDHD1_1st WDR55 Beta-prop_EML Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd WD40_Gbeta WD40_RFWD3 EIF3I WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_DCAF12 Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_IFT122_1st WD40_like WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_SPT8 KNTC1_N Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N WD_LRWD1 Cytochrom_D1 NRBF2
Other DBs
NCBI-GeneID: 124983610
NCBI-ProteinID: XP_047406969
LinkDB
Position
4:153288605..153341089
AA seq 661 aa
MQENLRFASSGDDVKIWDASSMTLVDKFNPHTSPHGISSMCWSSNNNFLVTASSIGDKIV
VSSCKCKPVPLLELAEGQKQTCVDLNSTSMYLVSGGLNSTVNIWDLKSKRVHRSLKDHKD
EVTCVTYNWNDCYIASGSLSGEIILHSVTTNISSTPFGHGSNQSVRHLKYSLFKKSLLGS
VSDNGIVTLWDVNSQSSYHNFDSTHKAPASGICFSPVNELLFVTIGLDKRIILYDTSSKK
VVKTLVADTPLTAVDFMPDGATLAIGSSRGKIYQYDLRMLKSPVKTISAHKTSVQCIAFQ
YSTTLTKSSLNKGCSNKATAVNKRAINASTAGGGIQNSGIVREATTTSIATVLPQPMTAA
VGKATVAVQDKAGLPRSINTDILSKETDVGKSQDFSSFDDTGKSSLGDMFSPIRDDAVVN
KGGDESVGKGDGFDFLPQLNSVFPTRKNPVTLNTSALNSSPLNVFMGSPGKEENENHDLI
TESKKTYLGKQDPKDSFKQFAKLISSGTETGNLNTSPSSNQTRNLEKFEKPEKEFEAQFI
YEPPVNGSSTPNPKIASSSVTAGVASSLSEKIVDTIGNNRPNAPLTSVQIRFIQNMIQET
LDDFREACHRDIVNLQVEMIKQFHMQLNEMHSLLERYSVNEGLVAEIERLREENKRLRAH
F
NT seq 1986 nt   +upstreamnt  +downstreamnt
atgcaggaaaacctcagatttgcttcatcaggagatgatgttaaaatatgggatgcttca
tctatgacactggtggataaattcaacccccacacatcaccacatggaatcagttcaatg
tgttggagcagcaataataactttcttgtaacagcatcttccattggtgacaaaatagtt
gtttcaagttgcaaatgtaagcctgttccacttttggagcttgctgaagggcaaaagcag
acatgtgttgatttgaattccacatctatgtatttggtaagcggaggcctaaatagcact
gttaatatttgggatttaaaatcaaaaagagttcatcgatctctcaaggatcataaagat
gaagtaacttgtgtaacatacaactggaatgattgctatattgcttctggatctcttagt
ggtgaaattattttgcacagtgtaaccactaatatatctagtactccttttggccatggt
agtaaccagtccgttcggcacttgaagtactccttgtttaagaaatcgctattgggcagt
gtttcagataatggaatagtaactctctgggatgtgaatagtcagagttcataccataac
tttgatagtacgcataaagctccagcttcaggcatctgtttttctcctgtcaatgaattg
ctgtttgtaaccataggcttggataaaagaatcatcctctatgacacttctagtaagaag
gtagtgaaaactttggtggccgacactcctctgactgcagtcgattttatgccagatgga
gccactttggctattggatcttcccgagggaaaatatatcaatatgatttaaggatgttg
aaatcaccagttaaaaccattagtgctcacaagacatctgtgcagtgtatagcatttcag
tactccactactcttactaagtcaagtttaaataaaggctgttcaaataaggccacagca
gtgaataaacgagccattaatgcgagcactgctggtggaggaattcagaattctggaatt
gtcagagaagcaaccaccacttccattgccacagttctcccacaacccatgacagcagct
gtggggaaagcaacagttgctgttcaggacaaagcaggtttgcctcgaagcataaataca
gatattttatctaaggaaactgacgttggaaaaagtcaggatttctccagctttgatgat
actgggaaaagtagtttaggggacatgttctcacctatcagagatgatgctgtagttaac
aagggaggtgatgagtctgtaggcaaaggagatggctttgactttctaccacaattgaac
tcagtgtttcctacaagaaaaaatccagtaactttaaatacttcagcactgaattctagc
cctcttaatgtttttatgggatctccagggaaggaggaaaatgaaaatcatgatctgata
actgagtctaagaaaacatatctaggaaaacaggatcctaaagattccttcaaacagttt
gcaaagttgatctcttctggtactgaaactggaaatctaaatacctctccatcatctaac
caaacaagaaatcttgagaaatttgaaaagccagagaaagaatttgaagcccagttcata
tatgaaccaccagttaatggatcttcaactccaaatccaaagatagcatcatcttccgtt
actgctggagtcgccagttcactctcagaaaaaatagttgataccattgggaacaatcgg
ccaaatgcaccattgacatctgttcaaatccgttttattcagaatatgatacaggaaaca
ctggatgactttagagaagcatgccatagggacattgtgaatttgcaagtggaaatgata
aaacagtttcatatgcagctgaatgaaatgcactctttgctggaaagatactcagtgaat
gaaggtttagtggctgaaattgaaagactacgagaagaaaacaaaagactacgggcccac
ttttga

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