Sciurus carolinensis (gray squirrel): 124983610
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Entry
124983610 CDS
T08117
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124983610
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124983610
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
124983610
Microtubules and associated factors
gamma-tubulin ring complex
124983610
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
124983610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
WD40_RFWD3
EIF3I
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
WD40_like
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_SPT8
KNTC1_N
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
WD_LRWD1
Cytochrom_D1
NRBF2
Motif
Other DBs
NCBI-GeneID:
124983610
NCBI-ProteinID:
XP_047406969
LinkDB
All DBs
Position
4:153288605..153341089
Genome browser
AA seq
661 aa
AA seq
DB search
MQENLRFASSGDDVKIWDASSMTLVDKFNPHTSPHGISSMCWSSNNNFLVTASSIGDKIV
VSSCKCKPVPLLELAEGQKQTCVDLNSTSMYLVSGGLNSTVNIWDLKSKRVHRSLKDHKD
EVTCVTYNWNDCYIASGSLSGEIILHSVTTNISSTPFGHGSNQSVRHLKYSLFKKSLLGS
VSDNGIVTLWDVNSQSSYHNFDSTHKAPASGICFSPVNELLFVTIGLDKRIILYDTSSKK
VVKTLVADTPLTAVDFMPDGATLAIGSSRGKIYQYDLRMLKSPVKTISAHKTSVQCIAFQ
YSTTLTKSSLNKGCSNKATAVNKRAINASTAGGGIQNSGIVREATTTSIATVLPQPMTAA
VGKATVAVQDKAGLPRSINTDILSKETDVGKSQDFSSFDDTGKSSLGDMFSPIRDDAVVN
KGGDESVGKGDGFDFLPQLNSVFPTRKNPVTLNTSALNSSPLNVFMGSPGKEENENHDLI
TESKKTYLGKQDPKDSFKQFAKLISSGTETGNLNTSPSSNQTRNLEKFEKPEKEFEAQFI
YEPPVNGSSTPNPKIASSSVTAGVASSLSEKIVDTIGNNRPNAPLTSVQIRFIQNMIQET
LDDFREACHRDIVNLQVEMIKQFHMQLNEMHSLLERYSVNEGLVAEIERLREENKRLRAH
F
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaaacctcagatttgcttcatcaggagatgatgttaaaatatgggatgcttca
tctatgacactggtggataaattcaacccccacacatcaccacatggaatcagttcaatg
tgttggagcagcaataataactttcttgtaacagcatcttccattggtgacaaaatagtt
gtttcaagttgcaaatgtaagcctgttccacttttggagcttgctgaagggcaaaagcag
acatgtgttgatttgaattccacatctatgtatttggtaagcggaggcctaaatagcact
gttaatatttgggatttaaaatcaaaaagagttcatcgatctctcaaggatcataaagat
gaagtaacttgtgtaacatacaactggaatgattgctatattgcttctggatctcttagt
ggtgaaattattttgcacagtgtaaccactaatatatctagtactccttttggccatggt
agtaaccagtccgttcggcacttgaagtactccttgtttaagaaatcgctattgggcagt
gtttcagataatggaatagtaactctctgggatgtgaatagtcagagttcataccataac
tttgatagtacgcataaagctccagcttcaggcatctgtttttctcctgtcaatgaattg
ctgtttgtaaccataggcttggataaaagaatcatcctctatgacacttctagtaagaag
gtagtgaaaactttggtggccgacactcctctgactgcagtcgattttatgccagatgga
gccactttggctattggatcttcccgagggaaaatatatcaatatgatttaaggatgttg
aaatcaccagttaaaaccattagtgctcacaagacatctgtgcagtgtatagcatttcag
tactccactactcttactaagtcaagtttaaataaaggctgttcaaataaggccacagca
gtgaataaacgagccattaatgcgagcactgctggtggaggaattcagaattctggaatt
gtcagagaagcaaccaccacttccattgccacagttctcccacaacccatgacagcagct
gtggggaaagcaacagttgctgttcaggacaaagcaggtttgcctcgaagcataaataca
gatattttatctaaggaaactgacgttggaaaaagtcaggatttctccagctttgatgat
actgggaaaagtagtttaggggacatgttctcacctatcagagatgatgctgtagttaac
aagggaggtgatgagtctgtaggcaaaggagatggctttgactttctaccacaattgaac
tcagtgtttcctacaagaaaaaatccagtaactttaaatacttcagcactgaattctagc
cctcttaatgtttttatgggatctccagggaaggaggaaaatgaaaatcatgatctgata
actgagtctaagaaaacatatctaggaaaacaggatcctaaagattccttcaaacagttt
gcaaagttgatctcttctggtactgaaactggaaatctaaatacctctccatcatctaac
caaacaagaaatcttgagaaatttgaaaagccagagaaagaatttgaagcccagttcata
tatgaaccaccagttaatggatcttcaactccaaatccaaagatagcatcatcttccgtt
actgctggagtcgccagttcactctcagaaaaaatagttgataccattgggaacaatcgg
ccaaatgcaccattgacatctgttcaaatccgttttattcagaatatgatacaggaaaca
ctggatgactttagagaagcatgccatagggacattgtgaatttgcaagtggaaatgata
aaacagtttcatatgcagctgaatgaaatgcactctttgctggaaagatactcagtgaat
gaaggtttagtggctgaaattgaaagactacgagaagaaaacaaaagactacgggcccac
ttttga
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