Sciurus carolinensis (gray squirrel): 124983646
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Entry
124983646 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: protein LMBR1L-like
KO
K25215
protein LMBR1L
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124983646
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
124983646
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Gene cluster
GFIT
Motif
Pfam:
LMBR1
SH
TadE
Oxidored_q4
Motif
Other DBs
NCBI-GeneID:
124983646
NCBI-ProteinID:
XP_047407047
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Position
4:complement(109613190..109627986)
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AA seq
489 aa
AA seq
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MEEADYEVLSVREQLFHERVRECIISILLFATLYILCHIFLTRFKKPAEFTTVDDEDATV
NKIALELCTFTLAVALGAVLLLPFSIISNEVLLSLPRNYYIQWLNGSLIHGLWNLVFLFS
NLSLIFLMPFAYFFTESEGFAGSRKGVLGRVYETVVMLMLLTLLVLGMVWVASAIVDNNK
ASRESLYDFWEYYLPYLYSCISFLGVLLLLVCTPLGLARMFSVTGKLLVKPRLLEDLEEQ
LYCSAFEEAALTRRICNPTSCWLPLDMELLHRQVLALQTQRVLLEKRRKASAWQRNLGYP
LAMLCLLVLTGLSVLIVAIHILELLIDEAAMPRGMQGASLGQVSFSKLGSFGAIIQVVLI
FYLMVSSVVGFYSSPLFGGLRPRWHDTAMTQIIGNCVCLLVLSSALPVFSRTLGLTRFDL
LGDFGRFNXLGNFYIVFLYNAAFAGLTTLCLVKTFTAAVRAELIRAFGLDRLPLPVSGFP
RTSRKTQHQ
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagctgactacgaagtgctatccgtgcgggagcagctatttcacgagagggtc
cgcgagtgcatcatctcaatacttctgtttgcaacactctacatcctctgccacatcttc
ctgacacgcttcaagaagcctgctgagttcaccacagtggatgatgaagatgccacagtc
aacaagattgcgcttgagctgtgtacctttaccctggcagttgccctgggtgctgtcctg
ctcctgcccttttccatcatcagcaacgaggtgctgctctcactgccacggaactactac
atccagtggctcaatggctccctcatccacggcctttggaaccttgtttttctcttctcc
aacctgtccctcatattcctcatgccctttgcatacttcttcactgagtctgagggcttt
gctggctccagaaagggtgtcctgggcagagtctacgagacagtggtgatgttaatgctt
ctcactcttctggtgctgggcatggtatgggtggcatcagccattgtggacaacaacaag
gccagcagggagtctctgtatgacttctgggagtactatctcccctatctctactcctgc
atctccttccttggggtcctgctactcctggtgtgtactccactaggtctcgcccgcatg
ttctcagtcactgggaagctgctggtcaagccccggttgctggaagacctggaagaacaa
ctgtactgctcagcctttgaggaggcagctctgacccgtaggatctgtaatcccacctcc
tgctggctgcctttagacatggagctgctgcacagacaggtcctggctctgcagacacag
agggtcctgttggagaagcggcggaaggcatcagcctggcagcggaacctgggctacccc
ctggccatgctgtgcttgctggtgctcacaggtctgtctgtgctcattgtggccatccac
atcctggagctgctcattgatgaggctgccatgccacgaggcatgcagggtgcctccctg
ggccaggtctccttctccaagctgggctccttcggtgccatcatccaggttgtactcatc
ttttacctgatggtgtcctcggttgtgggtttctacagctctccactttttgggggcctg
cgacccaggtggcatgacacagccatgactcagataattgggaactgtgtctgtctcctg
gtcctaagctcagcactccctgtcttctctcgaaccctggggctcactcgctttgacctg
ctgggtgactttggacgcttcaacntgctgggtaatttctacatcgtgttcctctacaat
gcagccttcgctggcctcaccacactctgtctggtgaagaccttcactgcagctgtgcgg
gcagagctgatccgggcctttgggctggatagactaccgctgcctgtctctggttttccc
cggacatccaggaagacccagcaccagtga
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