KEGG   Sciurus carolinensis (gray squirrel): 124983700
Entry
124983700         CDS       T08117                                 
Name
(RefSeq) elongation factor 1-alpha 1-like
  KO
K03231  elongation factor 1-alpha
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03013  Nucleocytoplasmic transport
ncar05134  Legionellosis
ncar05140  Leishmaniasis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    124983700
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05134 Legionellosis
    124983700
  09174 Infectious disease: parasitic
   05140 Leishmaniasis
    124983700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncar03019]
    124983700
   03016 Transfer RNA biogenesis [BR:ncar03016]
    124983700
   03012 Translation factors [BR:ncar03012]
    124983700
   04131 Membrane trafficking [BR:ncar04131]
    124983700
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ncar04147]
    124983700
Messenger RNA biogenesis [BR:ncar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     124983700
Transfer RNA biogenesis [BR:ncar03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    124983700
Translation factors [BR:ncar03012]
 Eukaryotic type
  Elongation factors
   124983700
Membrane trafficking [BR:ncar04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    124983700
Exosome [BR:ncar04147]
 Exosomal proteins
  Proteins found in most exosomes
   124983700
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4
Other DBs
NCBI-GeneID: 124983700
NCBI-ProteinID: XP_047407134
LinkDB
Position
4:complement(86816537..86818074)
AA seq 462 aa
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITILISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGSASGTTLLEALDCILPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALS
EALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRPSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPP
LGRFAVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQKAQKAK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgggaaaggaaaagactcatatcaacatcgttgtcatcggacacgtagattcaggcaag
tctaccactactggtcatctgatctacaaatgtggtgggatcgacaaaagaaccattgaa
aaatttgagaaggaagctgctgagatgggaaagggctcattcaagtatgcctgggtcttg
gataaactgaaagctgagcgtgagcgtggtatcaccattctcatctccctgtggaaattt
gagaccagcaagtattatgtgactatcattgatgccccaggacacagagacttcatcaaa
aatatgattacaggcacatctcaggctgactgtgctgtcctgattgttgctgctggtgtt
ggtgaatttgaagctggtatctccaagaatgggcagacccgtgagcatgcccttctggct
tacacactgggtgtgaaacaactaattgttggtgttaacaaaatggattccactgagcca
ccctacagtcagaagagatacgaggaaatcgttaaggaagtcagtacctacattaagaaa
attggctacaaccctgacacagtagcatttgtgccaatttctggttggaatggtgacaac
atgttggagccaagtgctaatatgccttggttcaagggatggaaagtcacccgtaaagat
ggcagtgccagtggaaccacactgcttgaagctttagattgcatcctgccaccaactcgt
ccaactgacaagcctttgcgtctgcccctccaggatgtctacaaaattggtggtattggt
actgtccctgtgggccgagtggagactggagttctcaagcctggcatggtggtcaccttt
gctccagtcaatgtcacaactgaagtaaagtctgttgaaatgcaccatgaagctctgagt
gaagctcttcctggagataatgtgggcttcaatgtcaagaacgtgtctgtcaaagatgtt
cgtcgtggcaatgttgctggtgacagcaaaaacgacccaccaatggaagcagctggtttc
actgctcaggtgattatcctgaaccatccaggccaaatcagtgctggctatgcccctgta
ctggattgtcacacagctcacattgcttgcaagtttgctgagctgaaagaaaagattgat
cgcccttctggtaagaagctggaagatggtcctaaattcttgaagtctggtgatgctgct
atcgttgatatggttccaggaaagcccatgtgtgtcgagagcttctctgactatcctcct
ctgggtcgttttgctgttcgtgatatgaggcagacagttgctgtgggtgtcatcaaagca
gtggacaagaaggctgctggagctggcaaggtcaccaagtctgcccagaaagctcagaag
gctaaatga

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