Sciurus carolinensis (gray squirrel): 124983703
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Entry
124983703 CDS
T08117
Name
(RefSeq) ran GTPase-activating protein 1 isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124983703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124983703
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
124983703
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_NLRC3
LRR_6
LRR_CARMIL
LRR_TMOD-LMOD
LRR_NLRC4
LRR_4
CPSF100_C
Nop14
RNA_pol_Rpc4
DNA_pol_phi
PI3K_1B_p101
Presenilin
Rrn6_K-rich
PPP4R2
CobT
DDHD
Motif
Other DBs
NCBI-GeneID:
124983703
NCBI-ProteinID:
XP_047407138
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All DBs
Position
4:complement(169592391..169619995)
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AA seq
589 aa
AA seq
DB search
MASEDIAKLAETLAKTQVAGGQLSFKGKSLKLNTAEDAKDVIKEIEDFDGLEALRLEGNT
VGVEAAKVIAKALEKKSELKRCHWSDMFTGRLRSEIPPALISLGEGLITAGAQLVELDLS
DNAFGPDGVRGFEALLKSPACFTLHELKLNNCGMGIGGGKILAGALTECHRKSSAQGKPL
ALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRV
INLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAIAIADAVRGGLPKLKELNL
SFCEIKREAALAVAEAVADKAELEKLDLNGNTLGEEGCEQLQEVLDGFNMARVLASLSDD
EGEDDEDEEEEEGEEEEEEEEEEEEEEEEEEEEEEEEEEPEQRGQGEESITPSRKILDPN
SGEPAPVLSSPPPADVSTFLAFPSPEKLLRLGPKSSLLIAQQTDTSDPEKVVSAFLKVSS
VFKDEATVRTAVQDAVDALMKKAFSCASFNSNVFLTRLLVHMGLLKSEDKIKAIGNLYGP
LMVLNHMVQQDYFPKALAPLLLAFMTKPNGALESCSFARHNLLQTLYKV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgaagacattgccaagctggcagagaccctggccaaaacccaggtggcgggg
ggacagctgagtttcaagggcaagagcctcaaactgaacacagcggaagatgctaaagac
gtgattaaagaaattgaagatttcgatggcttggaggctctgcgcttagagggcaacacg
gtgggtgtggaagcagccaaggtcattgccaaggccttagagaagaagtcagagttgaag
cgatgccactggagtgacatgttcacagggaggctgaggtccgagatccctccggccctg
atttcactaggggagggactcatcactgctggggcccagctggtagagctggatctaagt
gacaatgcatttggacccgatggtgtgcgtggcttcgaggccctgctcaagagcccagcc
tgcttcaccctgcacgaactcaagctcaacaactgtggcatgggcatcggtggcggcaag
atcctggcaggggctctgaccgagtgtcaccggaaatccagtgcccagggcaagccactg
gctctgaaggtctttgtggctggcagaaaccgtctggagaatgatggagccactgccttg
gcagaagcttttgggatcattgggactctggaggaggtgcatatgccacagaatgggatc
aaccaccccggtgtcacagccttggcccaggcctttgccatcaaccccctgctgcgggtc
atcaacctcaatgacaacacctttactgagaagggtgcagtggccatggctgagactctg
aagaccttgcgacaggtggaggtgatcaattttggggactgcctcgtgcgctccaagggg
gctattgccatcgcagatgccgtccgtgggggcctgcccaagctgaaggaactgaacctg
tcattctgtgaaatcaagagagaggctgccctggctgtcgctgaagctgtggcagacaag
gctgaactggagaaactggatctcaatggcaacaccctaggagaagagggctgtgagcag
ctgcaggaggtactagatggcttcaacatggccagggtgctggcgtccctcagtgatgat
gaaggtgaggatgatgaggatgaggaggaggaggaaggagaagaggaagaggaggaagag
gaagaggaagaagaggaagaggaggaggaggaagaggaagaagaggaggaggaagagccc
gagcagcgagggcaaggggaggagtcaatcacaccatcaagaaaaattctggaccctaac
agtggggagccagctcctgtgctgtcctccccgcctcctgcagacgtctctacctttctg
gcattcccctctccagaaaagctgctgcgccttgggcccaagagttctctgctgatagcc
cagcagactgacacatctgacccggagaaagtggtctctgccttcctgaaggtgtcctct
gtgtttaaggacgaagccacagtgaggacagcagtgcaggatgcagtagacgccctcatg
aagaaggccttcagctgcgcctccttcaactccaacgtcttcctgaccaggctcctcgtc
cacatgggtctgctcaagagtgaagataagatcaaggccattggcaacctgtatggcccc
ttgatggtgctgaaccacatggtgcagcaggactatttccccaaggccctcgcacccctg
cttctggcattcatgaccaagcccaacggtgccctggaatcctgctcctttgcccgccac
aatctactacagacgctgtacaaagtctag
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