Sciurus carolinensis (gray squirrel): 124983711
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Entry
124983711 CDS
T08117
Name
(RefSeq) cilia- and flagella-associated protein 54-like
KO
K25553
cilia- and flagella-associated protein 54
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncar03037
]
124983711
Cilium and associated proteins [BR:
ncar03037
]
Motile cilia and associated proteins
Sperm associated proteins
124983711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
Motif
Other DBs
NCBI-GeneID:
124983711
NCBI-ProteinID:
XP_047407155
LinkDB
All DBs
Position
4:152955487..153270812
Genome browser
AA seq
3177 aa
AA seq
DB search
MAAHGASPSLMSDASHSSVSPQELPPTPPPTSNAVSESPRESKASSANPLLLQVTSPEDP
LPIAAFYGPLDAKNPLLATFEKEIRELLGFIKKKKALETTTEEKHELRRRCATSLFDIWT
KYAPRLPDDYYNEKLLKVGDSLCQMKEYKLALWQCYGRYLQQFSTNFDENEADVKQFKAV
FFPKGFGDKTAALTFHALSAKNICNYRLICDADLNMKNKESVNQCLSILFSLRLIMQVAL
PQEHLCWIIFNGTIYIYTICRKLMILGQSSKALEYLLWASMCMESSVPLLSVRYLTWRTT
LYTAVCQCYYDCQVGVHGEAFARRGLAKIDELRQLELMSSSQSQEESRRYFREATIKMAV
MIFKRGVFESRRKTKTVFRPKIRLNLKEAQSLPWPRTITERLLDEMFDSSASRFLAVLEA
LSDPTRRTLQTGPIVTDEVELRDVVSELFIAGKELLMMSSIGPSGMLGFPNTSLLELLME
RANVISLEAAVKFIKLAFTYEEWSLFESSAMQLIYFLQRQDDPESKKAEKDLTLLIAIEP
LINLKRNKGLIIPLENYKEGESTRIYLKQIASHDFYVRNYGFSEDIFHLAAILYICVCNS
PQDVKPDKEIVVDMIMFLWQKCKFGIQRISTSRYDYAKFTQKISSNKWFYLLWQINEVIH
HYKLEDIDIVVVAEVTLRLSEILESLANPRRKFKKYPDASLKTEIKIFPGTPKGILDVLP
ILKKSPVEQLFFAYELLDKVIGAMNSNCVLSTLPSGSPVIDHCYVKCSPELDGNTYKPVT
ANSFLMDLHLELIQAQHRITIVLLDKLQVLQAPTASKNISAKDSEKLKQSRSDGCFTELS
VMNKIKKNKLSKAIYLMQKALVLFEKDADCMTSQNFLMEAYSLIAKVEAEQNALYSYQKY
LESSKRKKNRIPPPPLLLSRTHCSVTLKPTPFISDVKVSWYCILGCKAEGSYGKVRLNNN
HLPNSGEAIPADGKSIFEVKGLEMNEKYIFAVAAYSSNGKLVGDAIGETTKPILVYPPLS
TVTTRMYLTQVAYQIGNYELTKKVFSPVWDYFVASPLQDEQSTICLSNIMTITQRRLYSD
ILAETSSILLFLFLRNIFVISDIKIKEENLFCDNIKGNDIFPAQQMARLMECERVLVALE
LSIFLNDSSYILQAVTQCYGLLAPIIYHNIVLVPVVQILIKCLVVLQGVPNVVHLKKNIS
SFESIQHMIACCFFYVTKILRSWKEYDLAVMIINYGKKMLDVTSECKSLFGKNDPEEMAD
EGSSKKSLKTKKPQQVFLPEKLNEQLNLLESHLLRMIKQYVVTELSGAEDPIFLYPVVLN
WSVKGAVKEVMKFKHGPRFLEFFTQVMLKCMNEEKFSLLVEITIPVYDFLKRRNESLIGQ
RKIRYRDNVAYKKANMSSKKFKAVVVEIGKNVDTSSRKKNVKRETLRDFYAKNPFIFEIP
ENERHKRPDVRKVAHRYLMNRVNPLILDYVKRKRFHQIFLEEMPWRAQMNLYLAITHYNL
LLQKLGERMKMKFGVSHTVVSFRSCDPNIFSLYNSGTVLPTAKLTVENYIAMLDFLLTAK
KRKAYLPSDAEEFSAFVNSKSSEDNIPKTRTFYESDFQSGLSAREKDRAHLELDHFMKVF
LYCRRAMVLAHRGGYWTLLQNCCRTFWNFTQELQILLKQTMDLYKTFPVSQDTFLCTSVL
PFYLGAELLIDMLLHLQNIDSIKFIEDKGEFIVPSCYGNIKYDNGGSSLSFEHPLDDVNV
VDLKWIHDFVLKSLEVLYQVEKWETLVSLAIHFNIISHERYTEQVTPLLVYAQRQLLLRI
QRFKGPDITQQSCARYEAEYGEKITCRNFIGKQLKIDPSISKTIDTGDCTDFLKVLISSE
YSRAKQIICVPVDVTDTLRCFRETLEKSKYHNRSIRHSRKLLSLFLAQTQGDKDGITNLR
IISGKVEFCLGAEEMHMSTPPNLSQEHFRVFSSVEKSKLSYSQLGLVISSFHQTIDVLQA
SNQRSLKVQALHTLGNLLIFAEKKRAAFKCWCEALDDIFRKSDVLHTWKEFGPSSTSAPN
GYSSSAFKDYSEEFLSKVGIWGCLQGAVISAKIAQFIKTLNVNKRINCCILSALLFQGLL
RTTLPHPKAQRSYAQYEITQLLPGIELFSDRNRADICSVIASLYYVIRELHYAKQNLMVL
PLLALYQYFVSGICQDLIRNLEARILKVEVLTDLHFFSEAFYELSQIFYGKNMPCSVPSG
FKATGKIKMFPSFDSGKPLTNKENVQALDELINRGLPVVLVTIGQPHLLNKFYLVKAYFF
TSVAATINCVPENSLKILYQGASLGGSERSKPTVPNLKELYLKDDGGGSLHQLTKVKDEF
TLNMLKSVLLMEAEERLNFLVSEMEHPGHKDLSQCSAGELEIVVEARLQLAAVALQRHRA
AHSAAIIYSTLKLLQDSKLFKKKVVQDDAETPLSPGTSVSDNKDDEFLDPISLNAREYFN
IHLWLRCCLALVTAFVSQIRGIGIVKENDMTDCLNLIREVCVEAKSAEDLELQAEFLMQA
VILGLQEKHLKADIITNLQDIIHLLEGKEFISPRSWLTLARSLVLLDDLTKAEKFKESPS
SKTEKLKFLTQAHNILIEQMLTFGETIELYLSNPEYANLLQPLKNIYLPHVMLLAKVKMR
IGHTLAKQVYYSNKKKDSSKWLPALHLFDIALGLCRITAMEEHEVEAEILFQKGKIERQI
LMEEKSPTMQLESLFEAVQLSLKNDQNSGLIRDSYLELALWYLHLKKPKRKNSATPLTLK
PLFRRQSSVKESTIDKLEIYNSLAWIAIRAAAQVSEAVLAINLLIGKKNARTDKVSEIIL
PNIPEFATVDLLSSYTDYLLDNYQVDFQNFCTALYQNDDIYDNTDARTKIQTKVDITWIL
LLRYYIHLQRINNLSKLLASAKPVSGISLPDDTLLTSVYNSELILRQKEMHIFLKKYLQL
YSSSCIDEFPKELFLGLENPLLSEKVLYDTSAKVYHDSSQQSVFSLKLYSSPSPTDITSS
EMAIQTLNKELCFQWYIPPLDKPPKDGEPMVLLLCAYNTKLMKSSDIRLSNCSNIFVDSF
WIPLNRVISVHEKLSNLAQIAELSLPAIPEITSNEDAYKMEETEEKPIDKDMENMIIECC
SEILALFLNDREPTPLTEVPFDISLPSIFNLERLFDLANGCIISGGSLFNWIVSIIS
NT seq
9534 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcacggcgccagcccgagcctcatgtcggacgcatctcactcctccgtgtcg
ccccaagaactgccaccgaccccacccccgacttcgaatgcagtttcagagtcgccccgg
gagtcgaaggcgagctccgcgaacccgctgctgctccaagtgaccagtcccgaggaccct
ttgcccatcgctgcgttttatggaccgttggacgctaaaaacccgcttctcgccactttc
gagaaggagatacgggagttgttaggctttattaagaagaagaaggctttagagaccacg
acagaagagaagcacgaattgcgtcggcgttgtgccacctctttgtttgatatttggacc
aaatacgccccccggctgccagatgactattacaatgaaaagcttctgaaggttggagat
agcctttgtcaaatgaaagaatacaaactggctctttggcagtgctatggaagatatctt
cagcagttcagtaccaattttgatgagaatgaagcagatgtgaaacaattcaaagctgtc
ttttttccaaaaggctttggagataaaactgctgcacttacatttcatgctttgagtgcc
aaaaatatttgcaactaccggctgatctgtgatgctgatctaaacatgaagaataaagaa
tctgtgaaccagtgtctgtctatcttgttctccttaaggctcatcatgcaggtggctttg
ccgcaggagcacctttgttggattatcttcaatggtaccatttatatttataccatttgc
aggaaactgatgatcctgggtcagtcctccaaggccttagagtacctgctgtgggccagc
atgtgtatggagtcctcagtcccgctcctgtctgtcaggtacttgacatggagaactact
ctttacaccgctgtctgccagtgttactatgactgccaagtgggtgttcatggggaggca
tttgctcggcgtggattagctaaaattgatgagttaaggcaactggaattaatgagttcc
tcacagtcacaggaagaatccagaagatattttagagaggccacaataaagatggcggtg
atgatcttcaaaagaggagtatttgaatctagaagaaaaaccaaaactgtctttagacca
aagataagacttaacctaaaggaagctcaaagcttgccatggccacgtaccattacagag
cggctgttggatgaaatgtttgatagctctgcatcccgctttctggctgtcttggaagct
ctttctgatccaaccaggcgaacactacaaactggtcctattgtaaccgatgaagtggaa
cttcgtgatgttgtctcagaactgtttatagctggaaaagaacttttaatgatgtcaagt
attggtccaagtggaatgcttggttttcccaacacctctcttttggaacttttgatggaa
agagcaaatgttatttctctggaagctgctgtaaaatttataaaattagcatttacttat
gaagaatggagtttatttgaatcttcagctatgcagcttatttattttctccagaggcag
gatgatccagagtcaaagaaagcagagaaggatttaactcttctgattgcaatagaacca
ctaatcaacctgaagagaaacaaaggtctgataatccctttggaaaattataaagaagga
gagtcaactcgaatttatttaaagcaaattgcttctcatgatttttatgtgaggaattat
ggattttcagaagatatttttcacttggcagctatcctgtacatctgtgtctgtaactct
ccccaggatgttaagcctgataaagaaatcgttgtggacatgataatgttcctgtggcag
aaatgcaaatttggaattcagaggatcagtacgtccagatatgactatgcaaaattcacc
cagaaaatcagcagtaataaatggttttatcttctgtggcagataaatgaagtgattcac
cactataaattggaagacattgacattgtggtggtggcagaggtcacattacgattaagt
gaaatattagagtctttagcaaacccaaggagaaaatttaaaaaatatccagatgcatct
ttaaaaacagagattaagatattccccgggactccaaaagggatcctggatgttcttcca
atattaaagaaaagtcctgtggaacagttgttttttgcttacgaacttcttgacaaagta
attggtgcaatgaattctaattgtgttctatctacattgccaagtggatcaccagtaatt
gaccactgctatgtcaagtgttcccctgagttagatggaaacacttacaaaccagttaca
gccaatagtttcctaatggatttgcatctggaactaattcaagctcagcaccggataacc
attgtgcttctcgacaaattgcaagttttgcaggctccaactgctagcaaaaacatttct
gccaaagattcagaaaagttaaaacaatctagaagtgatggttgttttacagaattaagt
gtaatgaataaaataaagaagaacaaactatccaaagcgatttacttaatgcagaaagct
cttgtattatttgagaaagatgcagactgtatgacttcacagaactttttgatggaagcg
tattctttaattgcgaaagttgaagcagaacaaaatgccctatattcatatcagaaatat
ttggaaagctcaaaaagaaagaagaacagaatccctcctccacctctgctgctatcccga
actcattgttctgtgacactgaaacctactccgtttatttccgatgttaaggtgtcctgg
tactgcattttgggttgtaaagcagaaggaagttatggaaaagtgaggctaaataacaat
catctcccaaattcaggagaagcgattccagctgacggtaaaagtatttttgaagtgaaa
ggtttagaaatgaatgaaaaatacatatttgcggttgctgcttattcttctaatgggaag
cttgttggtgatgctattggggagacaactaaaccaattctggtttacccacctctttct
actgttactactcggatgtacctgacgcaggttgcctatcagattggtaactacgagttg
actaagaaggttttttctccagtttgggattattttgttgcctcaccgcttcaggatgaa
caatccactatttgtttgagcaatataatgactattacacagagaaggttatattcagat
attttggcagagacttcttcaatcctcttatttctttttcttagaaatatctttgtaata
agtgacattaaaattaaagaagaaaatcttttctgtgataatatcaaaggcaatgatatt
ttccctgctcagcaaatggctagactgatggaatgtgagagggtattagtggcattggaa
cttagcatctttttgaatgattccagttatatccttcaagctgtgactcagtgttatggc
cttcttgctcctataatatatcacaatattgttttggtacctgttgtacagatcttgata
aagtgcttagtggttttgcaaggggtcccaaatgttgttcacttgaagaaaaatatttcg
agttttgaaagtatacagcacatgatagcctgttgtttcttctatgtaacaaagattcta
cgttcatggaaggaatatgatctggcagtaatgattataaattatggaaaaaagatgttg
gacgtcacatcagagtgcaagtctctctttggtaagaatgatccagaagaaatggcagat
gagggttcttctaagaaatctttaaaaactaagaagccacagcaggtatttttgcctgaa
aaattaaatgagcaactgaacttgttggagtcacacctgctcaggatgataaaacaatat
gttgtgactgaactctcaggagcagaagaccctatatttctttaccctgtggttttaaat
tggtcagtgaaaggtgctgtgaaagaagttatgaaatttaagcacggacctagattcctg
gaatttttcacacaagttatgcttaaatgcatgaatgaagaaaaattttcccttttggtg
gagataaccattcctgtctatgacttcttgaaaaggaggaatgaatccctaattggacaa
agaaaaataagatatagggacaatgttgcttataaaaaggcaaatatgtcttcaaagaag
tttaaagctgtagtagtagagattggaaaaaatgtagatacatcatcaaggaaaaagaac
gtaaaaagggaaactctaagagatttttatgccaaaaatccatttatttttgaaatccca
gaaaatgaaagacataagagacctgatgttagaaaagtagcacatcgatacctgatgaat
cgtgtgaatcctctaatattagattatgttaaaagaaagaggtttcatcaaatatttctt
gaggagatgccctggagagctcagatgaacctgtatttggcaatcacacactacaacctg
cttttacaaaagctaggggaacgcatgaagatgaaatttggcgtttcacacacggtggtc
agtttccgatcatgtgatcctaatatattctcactgtataattcaggaacagtattgcca
acagcaaaactgactgtggaaaattatatagcaatgcttgatttccttcttacagctaaa
aaaagaaaggcttacttaccatcagatgctgaagaattttctgcatttgtgaattccaaa
tctagtgaagataatatacccaagacaagaacattttatgaatcagactttcaatcaggt
cttagtgccagagaaaaggatcgagcacatttggaactggatcattttatgaaagtcttt
ttatattgcaggagagcaatggttcttgctcatcgtggtggctactggactctgcttcag
aactgctgtcggaccttttggaactttactcaggagctgcaaatacttcttaaacagaca
atggatctttataaaacattccctgttagccaggatactttcctctgtacctctgttttg
ccattctatttgggagcagaattacttattgacatgttattacatctacaaaatattgat
tctattaagttcattgaagacaaaggagagttcattgttccaagctgttatgggaatatt
aaatatgataatggtggctctagcctttcttttgagcatcctttggatgatgtaaatgtg
gttgacctgaaatggatccatgactttgtattaaaatctctggaagttttatatcaagtg
gaaaaatgggaaacactagtgtcacttgccattcatttcaacataatttcacatgagagg
tacacagagcaggtgacaccacttctggtatatgcacagcgccagttgcttctgagaata
caaaggttcaagggcccagatattacccagcagtcttgtgcaaggtatgaggctgaatat
ggagagaagattacctgccgaaatttcattgggaagcagctcaagattgatccttcaatc
agtaaaacaatagatacaggggactgtacagatttcctaaaagtgcttatctcttcagaa
tacagcagagccaaacagattatctgcgtgcccgtggatgtgacagacactttgagatgc
tttagagagaccctggaaaaatccaaataccataacagatcaatccgacacagcagaaag
ttgctttcattatttctggcacagacacaaggagataaagacggaatcaccaatttaaga
atcatttctggaaaggtggaattttgtctgggagcagaagagatgcacatgtcaacacct
cctaatctttctcaggagcacttcagagtttttagttcagtggagaaaagcaaactttcc
tattcacagctaggactggtcatttcttcttttcaccagactattgatgttctccaagcc
agcaatcaaagaagtcttaaagttcaggcattgcatacacttgggaatcttctcatcttt
gcagaaaagaaaagggctgcttttaagtgctggtgtgaagctcttgatgacatattcaga
aaatcagatgtgctacatacatggaaagaatttggcccctcctctaccagtgcccccaac
ggttattcatcttcagccttcaaagactacagtgaggaatttctgtcaaaagttggcatt
tgggggtgtctgcaaggtgcagtcatatcagcaaagatagcacagtttattaagaccctg
aatgttaacaagagaatcaactgctgtattttgtctgcattactctttcagggtttgctt
cgaaccacacttccacatcccaaagcccaacgaagttatgctcagtatgaaatcactcag
cttctcccgggcattgaactcttctcggatagaaacagggctgacatctgctcggtcatt
gcaagcctgtattacgtcatacgtgaactgcactatgcaaagcaaaatctaatggttctg
cctctccttgcattgtaccaatattttgtttctggaatttgccaagaccttatcagaaat
ctagaagcaagaatcctcaaggtagaagtccttacagatttgcacttcttttctgaagcc
ttttatgagttatcccagatattttatggaaaaaacatgccttgctcagtcccttctggc
tttaaagctactggaaaaattaagatgtttccatcatttgactcaggaaaacctcttacc
aacaaagaaaatgtacaggcacttgatgaattaataaatagaggcttgcctgtagttctg
gttacaattggacaaccacatcttctaaataaattttatttggttaaggcatattttttc
acaagtgtggctgcgacaataaattgtgtaccagaaaattcactgaaaatactctaccag
ggagctagccttggtggctctgagcggagcaaaccaactgtccctaacttgaaagagcta
tatttaaaggatgatggaggtggctcattgcatcagcttacaaaagttaaagatgaattt
actcttaacatgctaaagtcagttttactgatggaagctgaagaaaggctgaacttcctt
gtatctgagatggagcatccaggccacaaggacctatctcagtgttctgctggtgagttg
gagattgtggtggaggcccggcttcagctggctgcagttgccctgcagagacaccgggca
gcacacagtgctgcaataatatattccacacttaaacttctccaagattcaaaacttttt
aaaaagaaggtagtgcaagatgatgcagaaacccccctttctccaggaacttctgtctca
gacaataaagatgatgagtttttagaccctatttccctgaatgctcgagaatatttcaac
attcatctgtggttgaggtgctgcttagcactggtgacggcgtttgtctcacaaattcgt
ggtattggaattgtgaaagagaacgatatgacagattgtttgaacctcatccgtgaagta
tgtgtggaagcaaaaagtgcagaggacttggagctacaggctgaattcttgatgcaagct
gtaatccttggcctgcaagaaaagcatttaaaggcagacatcatcacaaaccttcaggac
ataatacatttacttgaaggaaaagaatttatatctcctcgatcttggttaactctggcg
agaagccttgttctactggacgacttaacaaaagctgagaaattcaaggaatctccctct
tcaaaaacagaaaagttaaagtttttgactcaggctcacaatattctaattgaacagatg
ctaacttttggagaaacaattgaattgtatttatcaaaccctgaatatgcaaatctttta
cagcctttgaaaaatatctatcttcctcatgttatgttattggccaaagtaaaaatgaga
attggacatacattagccaaacaggtatattacagcaataaaaagaaggactcctcaaag
tggttacctgctcttcatctttttgatattgcattggggctttgtaggataacagctatg
gaggaacatgaggtagaagctgaaatcctctttcagaaaggcaaaatagaacgtcaaata
ctgatggaagagaaatctccaactatgcaacttgagagtttatttgaagctgtacaactc
agcttgaaaaatgatcaaaactcaggattgataagagattcctacctagaactggccttg
tggtatctgcatctgaagaagccaaagagaaagaattcagcaacaccattaacacttaag
cctcttttcagaaggcaaagttctgttaaggaatcaaccatagataaattagaaatatac
aattcattggcctggattgcaataagagctgcagcacaggtcagtgaagctgtgctagca
ataaacctacttattggaaagaagaatgctagaactgataaagttagtgaaatcatatta
ccaaatataccagaatttgccaccgtggaccttttgtcttcctacacagattatttgctc
gataactaccaagttgactttcagaatttctgtacagctttgtaccaaaatgatgacatc
tatgacaacacagatgctagaacaaagattcagaccaaagtagatatcacatggatcctt
ctcctgcgctactacatacacctgcaaagaatcaataacttgagcaaattgctagcatct
gcaaagccagtatctggaatttccttgccagatgatacgctcctcacatccgtttacaac
tctgaactgattttacgccaaaaagaaatgcatatttttcttaaaaagtacttacagcta
tattcttcttcttgtattgatgaattccccaaagaactttttctaggattggaaaaccca
cttctttcagagaaagtcttatatgacacatcagccaaggtatatcatgacagttcccaa
cagtccgttttttctttaaagctttattccagtccatctccgacagacataacatcatca
gaaatggcaatacaaactttaaacaaagaactttgttttcagtggtacattcctcccctg
gacaaacctccaaaggacggagaacctatggttttattattgtgtgcatataatacaaag
ctcatgaagagttcagatattagactttctaattgtagcaacatatttgttgactctttc
tggattccattgaatagggttatttcagttcatgagaaactatctaatcttgcacaaata
gctgaactatcattgccagcaattcctgaaattacttcaaatgaggatgcatataaaatg
gaagaaacagaagagaaaccgattgataaagatatggaaaacatgattattgaatgctgc
tctgaaatactagctctgtttttgaatgacagagagccaacaccactaactgaggtccca
tttgatatttcgctgccttctatattcaatcttgagagactctttgatcttgctaatggc
tgtattatatcaggaggaagccttttcaactggattgtgtccattatttcatga
DBGET
integrated database retrieval system
