Sciurus carolinensis (gray squirrel): 124983716
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Entry
124983716 CDS
T08117
Name
(RefSeq) 3'-5' exoribonuclease 1
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124983716
03036 Chromosome and associated proteins [BR:
ncar03036
]
124983716
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
124983716
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
124983716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
Motif
Other DBs
NCBI-GeneID:
124983716
NCBI-ProteinID:
XP_047407180
LinkDB
All DBs
Position
4:48320957..48350114
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AA seq
349 aa
AA seq
DB search
MEEEQSRQPGGEAVAPPQQEAQRPECGEEPQHAHREKKHRCRFDGQETKGSKFITSNGSD
FSDPVYKEIAITNGCINRMSKEELRAKLSEFKLETRGVKDVLKKRLKNYYKKQKLMLKES
SCADSYYDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLQIEDTFQQYVRPEINT
QLSDFCISLTGITQDQVNRADTFPQVLKKVIDWMKLKELGTKYKYCILTDGSWDMSKFLN
IQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLAIMLEKLGMDYDGRPHSGLDDSK
NIARIAVRMLQDGCELRINEKMHSGQLMSVSSSLPIEGAPAPQMPHFRK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagcagagtaggcagcctggcggcgaggccgtggcgcccccgcagcaggag
gcgcagcggccggagtgtggggaggaaccgcagcacgcgcatcgcgagaaaaagcatcga
tgtaggtttgatggccaagaaacaaaaggatctaagttcattacctcgaatggaagtgat
ttcagtgacccagtttacaaagagattgctattacaaatggttgtattaatagaatgagt
aaggaagaactcagagctaagctttcagaattcaagctcgaaaccagaggagtaaaggat
gtactaaagaagagactgaaaaactattataagaaacagaagctaatgttgaaagagagc
agttgtgctgatagttactatgactacatttgtattattgactttgaagccacttgtgaa
gagggtaatccacctgagttcatacatgaaataattgagtttcctgttgttttattgaat
actcacaccttacaaatagaagatacgtttcagcagtatgtgagaccagagattaacacg
cagctttctgacttctgcatcagtcttactgggattactcaggatcaggtcaacagagct
gatacttttcctcaggtactgaaaaaagtaattgactggatgaaattgaaggaattagga
acaaagtataaatattgcatattaacagatggttcgtgggatatgagtaagttcttgaac
attcagtgccagctgagcaggctcaaatatcctccctttgctaaaaagtggatcaatatt
cgaaaatcgtatggaaacttttacaaggttcctagaagtcaaaccaaactggcaataatg
cttgagaaattaggaatggattatgatggacgacctcacagtggtcttgatgattctaag
aacatcgcacgaatagcagtacgaatgcttcaagatggatgtgaactccgaatcaatgag
aaaatgcattcaggacagctaatgagtgtgtcctcttccttaccaatagagggcgctcca
gctccacagatgccacattttagaaagtaa
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