Sciurus carolinensis (gray squirrel): 124983731
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Entry
124983731 CDS
T08117
Name
(RefSeq) myosin-binding protein C, slow-type isoform X1
KO
K12557
myosin-binding protein C, slow-type
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124983731
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124983731
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124983731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
THB
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_CYK3_C
Ig-like_POM152
NDNF
Motif
Other DBs
NCBI-GeneID:
124983731
NCBI-ProteinID:
XP_047407203
LinkDB
All DBs
Position
4:157497607..157580326
Genome browser
AA seq
1178 aa
AA seq
DB search
MPEPTKKEENEVAAPAPPPEEPNKEKEAGTAPAKEEEEASPPSALPPGLGSRALERKDSE
WSVGEPPAGGEEQDKQNANSQMSTLFVEKPQTGTVKVGENITFIAKVKAEDLLRKPTVKW
FKGKWMDLASKAGKHLQLKETFERQTRIYTFEMQIIKAKENYAGNYRCEVTYKDKFDSCS
FDLEVHESTGTTPNIDIRSAFKRSGEGQEDAGELDFSGLLKRREVKQQEEEPEVDVWELL
KNANPNEYEKIAFQYGITDLRGMLKRLKRMRRVEKKSAAFAKILDPAYQVDKGGRVRFVV
ELADPKLEVKWYKNGQEIRPSTKYIFEHKGCQRIMFINNCSLTDDSEYYVTAGDEKCSTE
LFVREPPIMVTKQLEDMNAYCGERVELECEVSEDDANVKWFKNGEEIFPGPKSRYKIRVE
GKKHILIIEGATKADSAEYSVMTTGGQSSAKLSVDLRPLKILTPLTDQTVKLGKEICLKC
EISENISGKWTKNGLPVQESDRLKVVHKGKVHKLVIANALIEDEGDYVFTPDAYNVTLPA
KVHVIDPPKIILDGLDADNTVTVIAGNKLRLEIPVSGEPPPKCIWSRADKAIMEGSGRIR
AESYPDSSTLVIDVAERDDSGVYHINLKNEAGEAHASIKIKVVDIPDPPVAPNVTEVGDD
WCIMNWEPPAYDGGTPILGYFIERKKKQSSRWMRLNFDLCKETTFEPKKMIEGVAYEVRI
FAVNAVGISKPSMPSKPFVPLAVTSPPTLLAVDSVTDTTVTMKWRPPDQIGAAGLDGYVL
EYCFEGTEDWIVANTDLIDKTKFTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKE
IIEPPKIRIPRHLKQTYIRRVGEAVNLVIPFQGKPRPELTWKKDGQEIDKNQINIRNSET
DTIIFIRKAERSHSGKYDLQVKVEKYVESASIDIQIVDRPGPPQSVKIEDVWGENVALTW
TPPKDDGNAAITGYTIQKADKKSMEWFTVIEHYHRTNATITELVIGNEYYFRVFAENMCG
LSEEATMTKESAVIAKDGKIYKNPVYEDFDFTEAPMFTQPLVNTYAIAGYNATLNCSVRG
NPKPKITWMKNKVAIVDDPRYRMFSNQGVCTLEIRKPSPYDGGTYCCKAVNDLGTVEIEC
KLEVKGGLSFCRLLLQGVPPNIIDSYLRDLHSSNPEEY
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacccactaagaaagaggaaaatgaagtggcggccccagctccaccacctgaa
gaaccaaataaagagaaggaggcaggaactgcaccagcaaaagaggaagaggaagcctcc
ccgcctagtgccttgcctccaggtttgggtagtcgggccctggagagaaaagattcagaa
tggtctgttggtgaaccacctgctggtggagaggaacaagacaagcagaatgccaattct
caaatgtccaccctgtttgttgaaaaacctcaaacgggaacagtgaaagtgggtgaaaac
atcactttcatagccaaagtcaaggctgaagatcttcttagaaaacccactgtcaaatgg
ttcaaaggcaaatggatggacttggccagcaaagctgggaagcatctccagctgaaggag
acctttgagaggcaaactcggatatacacatttgagatgcagatcatcaaggccaaagag
aactatgcaggaaactacagatgtgaggtcacctacaaggataagtttgacagctgttca
tttgatcttgaagtgcacgaatctaccgggactactccaaacattgacatcagatctgcc
ttcaagagaagtggagaaggtcaagaggatgcaggggaacttgactttagtggtctcctg
aaacgtagggaggtgaagcagcaggaggaggaacccgaggtagacgtctgggagctgctg
aagaatgcgaaccccaacgagtacgagaagatcgctttccagtacggcattaccgacctg
cgcggcatgctcaagcggctcaagcgcatgcgcagggtggagaagaagagcgcagctttt
gcaaaaattcttgatcctgcatatcaggttgataaaggaggcagagtaaggtttgttgtg
gaactggcagatccaaagttggaggtgaaatggtacaaaaatggccaagaaattcgaccc
agcacaaaatacatctttgaacacaaaggatgccaaagaatcatgtttatcaataactgt
tcactgacggatgattcagagtattatgtgacagctggtgatgagaaatgttctactgag
ctctttgtgagagaacctccaattatggtgaccaaacaactggaagatatgaatgcttat
tgtggggaaagagttgaattggaatgtgaggtgtctgaagatgatgccaatgtgaaatgg
tttaagaatggcgaagagatcttccctggtccgaaatcaagatacaaaattagagttgag
ggcaaaaaacacattttgatcatagagggagccacaaaggccgacagtgcggaatactca
gtgatgacaacgggaggacagtcatctgccaaactgagtgttgacttgaggcctctgaag
attttgacacctctgactgatcagactgtaaaacttgggaaagaaatatgcttgaagtgt
gaaatctctgaaaacatatcaggaaaatggactaaaaatggcctgcctgttcaggagagt
gaccgtctgaaggttgttcacaaaggaaaagtccacaaattggttatagccaatgctctc
attgaagatgaaggtgattatgtgtttacaccagatgcctacaatgttactttgcctgcc
aaagttcatgttattgatcctcctaagatcatcctggatggtcttgatgctgacaatacg
gtgaccgtgattgcaggaaacaagcttcgtcttgagattcctgtctccggagaaccacct
cctaagtgcatttggagccgagcagataaggctattatggagggcagtggccggatacga
gcagaatcatatcctgatagcagcaccctggtcattgatgtggctgaaagagatgactct
ggtgtttaccacataaatctgaagaatgaagctggagaagcacatgcaagcatcaagatt
aaagttgtggacatccctgatcctccagttgcaccaaacgtgaccgaagtgggagatgat
tggtgcatcatgaactgggaacctcctgcctatgatggagggactccaatcttaggatac
tttattgagagaaagaagaagcaaagttccaggtggatgagactgaattttgatctctgt
aaagaaacaacttttgagcccaagaagatgattgaaggcgtggcctatgaggtccgcatc
tttgcagtcaatgccgttggaatctccaagcccagtatgccctctaagccctttgttccc
ttggctgtgaccagccctcctactctcctggctgtcgactctgtcaccgacaccactgtc
accatgaagtggaggcccccagaccagattggtgctgcaggtttagatggctatgtgcta
gagtattgctttgaaggaactgaggactggatagttgcaaacacagacctaattgacaag
accaagttcaccatcacgggtctgccgacagatgccaagatcttcgttcgcgtgaaggct
gttaatgccgcaggtgccagcgagcccaagtactattctcagcccattctcgtgaaggaa
atcatagagcctccaaagattcgcatcccaaggcacctgaagcaaacctatatccgcaga
gttggagaagctgtcaatctggttatacctttccagggaaaaccaagaccagaattaact
tggaagaaggatggtcaagagattgataagaatcaaataaacattcgcaactccgagact
gatacaatcatatttatcagaaaagcagagaggagccactcggggaaatatgatctgcag
gtcaaagtggaaaaatatgtggaaagtgcctccatcgacatccagatcgttgaccgtcca
ggtccaccccagtctgtgaagattgaagatgtctggggagagaacgtggctctcacgtgg
acaccaccgaaggatgatgggaacgccgccatcacagggtacacgatccagaaggccgac
aagaagagcatggaatggttcactgtcattgagcattatcaccgaaccaatgccaccatc
actgaactggtcatagggaatgaatattatttccgggtctttgctgagaacatgtgcggc
ctcagtgaggaagcaacaatgactaaagagagcgctgtgatcgccaaggacggcaaaatc
tacaaaaatccagtgtatgaagactttgatttcacagaggcgcccatgtttactcagcct
ttggttaacacctatgctatagctggttacaatgccaccctgaactgcagcgtgagagga
aatcccaagcccaaaataacctggatgaaaaacaaagttgctattgtggatgatccaaga
tacaggatgttcagcaaccagggggtctgtactctggagattcgcaaaccgagcccctat
gatggaggcacctactgctgcaaagcagtcaatgacctggggacagtggagatcgaatgc
aaactggaggtgaaaggtgggctgtccttctgcaggctcctcttgcaaggtgtgcctcca
aacataattgactcatatttgcgagacttacactcaagcaatcccgaggaatactga
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