Sciurus carolinensis (gray squirrel): 124983734
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Entry
124983734 CDS
T08117
Name
(RefSeq) trafficking protein particle complex subunit 11
KO
K20308
trafficking protein particle complex subunit 11
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124983734
Membrane trafficking [BR:
ncar04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
124983734
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Paralog
GFIT
Motif
Pfam:
Foie-gras_1
Gryzun-like
Gryzun
NTS_TR130
Prefoldin
Motif
Other DBs
NCBI-GeneID:
124983734
NCBI-ProteinID:
XP_047407209
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Position
4:36551712..36596338
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AA seq
1132 aa
AA seq
DB search
MSPTQWDFPVELCCRPMAFVTLTGLDVVYNAVHRAVWDAFCANRRADRVPISFKVLPGDH
EYPKCRPKRTSYEWYIPKGILKTGWMNKHLNLVPALVVVFYELDWDEPQWKEKQSECATR
VEIVRQSLQGRNTKVAVVLIQKKTPLPPGEDVIASERAAALCNACELSGKSLFVLPHTDH
LVGYIIRLENAFYEHAQTYYYTEIRRVKSHKEFLNKTTHQLLFVRHQFKIAFFSELKQDT
QNALKNYRTAYNLVHELRAHETNILEIKTMAGFINYKICRLCFQHNTPLDAIAQFRKHID
LCKKKIGSAELSFEHAAWMSKQFQAFGDLFDEAIKLGLTAIQTQNPGFYYQQAAYYAQER
KQHAKTLCNHEASVMYPNPDPLETQTGVLDFYGQRPWRQGILSFDLSDPEKEKVGILAIQ
LKERNVVHSEIIITLLSNAVAQFKKYKCPRMKSHLMVQMGEEYYYAKDYTKALKLLDYVM
CDYRSEGWWTLLTSILTTALKCSYLMAQLKDYITYSLELLGRASTLKDDQKSRIEKNLIN
VLMNEIPDPEPDCDVLAVKTAQKLWADRVSLAGSNVFTIGVQDFVPFVQCKAKFHAPSFH
VDVPVQFDIYLKADCPHPIRFSKLCVSFNNQEYNQFCVIEEASKASEVLENLTQGKMCLV
PGKTRKLLFKFVAKTEDVGKKIEITSVDLVLGNETGRCVVLSWQGGGGDAASSQEALQAA
RSFKRRPKLPDNEVHWDSIIIQASTMIISRVPNISVHLQHEPPALTNEMYCLVVTVQSHE
KTQIRDVKLTAGLKPGQDANLTQKTHVTLHGTELCDESYPALLTDIPVGDLHPGEQLEKT
LYVRCGTVGSRMFLVYVSYLINTTVEEKEIVCKCHKDETVTIETVFPFDVAVKFVSTKFE
NLERVYADIPFLLMTDLLSASPWALTIVSSELQLAPSMTAVDQLESQLDKVVLQTGESAS
ECFCLRCPSVGNEGGVATGHYIISWKRTSAMENIPVISTVITLPHVIVENIPLHVNADLP
SFGRVRESLPVKYHLQNKTNLVQDVEISVEPSDAFMFSGLKQIRLRILPGTEQEMLYNFY
PLMAGYQQLPSLNINLLRFPNFTNQLLRRFIPTSIFVKPQGRLMDDTSIAAA
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgagccccacgcagtgggacttccctgtggaattatgttgtcggcctatggcttttgtt
acacttacaggcctcgatgtggtttataatgctgtacatcgagctgtctgggatgctttc
tgtgccaatcgaagagctgatcgggtaccaatttctttcaaggtgctcccaggtgaccat
gaatatcccaaatgtagacccaagagaacttcctatgaatggtacattcctaaagggatc
ttaaagactggctggatgaataagcatctgaatctggtgcctgccctggtggttgtgttc
tatgaactggactgggatgagcctcagtggaaagaaaaacagtctgaatgcgctaccaga
gtggaaattgtcaggcaaagtttacaaggaagaaacacaaaagtcgcagtggttctgatt
cagaagaaaacccccttgcccccaggagaagatgtcattgcttcagaaagggctgcagct
ttatgcaatgcatgtgaactctcaggaaagtctttgtttgtgctgccccacactgaccac
cttgtgggttatattataagattagaaaatgccttttatgagcatgcacagacttattac
tacactgagattagaagagtgaaatctcataaagaattcttgaataaaacaacacaccag
cttttatttgttagacatcagtttaaaatagctttcttcagtgagttgaaacaagataca
caaaatgctctgaagaattataggactgcctataatcttgtacatgaattgagagctcat
gaaactaatattctggaaatcaagaccatggcaggatttataaattataagatctgtagg
ctgtgttttcaacacaataccccattggatgcaattgctcagttccgaaagcacattgac
ttgtgtaagaaaaaaattggaagtgcggaattgtcttttgagcatgctgcatggatgtct
aaacaattccaggcctttggagatttatttgatgaagctattaagttagggttaacagct
attcaaactcagaatcctggtttctattatcagcaggcagcctattatgctcaggagcgg
aaacagcatgcaaaaaccctttgcaaccatgaagcttctgtaatgtatcccaatcctgat
cccttagaaacacaaacaggcgttcttgacttttatggacaaagaccatggcgacaagga
atactaagttttgatctttctgatcctgaaaaagagaaggtgggaattcttgccattcag
cttaaagagagaaatgttgttcactctgaaatcataataactctcctgagcaatgctgtt
gcacagttcaaaaagtacaaatgtccaagaatgaaaagtcatctaatggttcaaatggga
gaagaatattactatgcaaaagattataccaaagctttgaaattgctggattatgtgatg
tgtgattatcggagtgaaggatggtggactctgctcacatctatattgactacagctttg
aaatgttcctaccttatggcccaattaaaggattacattacttattccctagaactcctt
ggaagagcttcaactctgaaagacgatcagaaatctcgtatagaaaaaaacctcataaac
gttttaatgaatgaaattccagatcctgaacctgactgtgatgtcttagctgtaaaaact
gctcagaagctgtgggcagaccgagtttctctggccggcagcaatgtcttcacaatagga
gtacaggactttgtgccctttgtacaatgcaaagccaagtttcatgccccaagttttcat
gttgatgttcctgttcagtttgatatttatctgaaggctgattgtccacatcccattagg
ttttccaaactctgtgtcagctttaataatcaggaatacaaccagttctgtgtaatagaa
gaagcatctaaagcaagtgaagttttggaaaatttgacccaagggaagatgtgtttagtt
cctggtaaaacaagaaaattgttatttaaatttgttgcaaaaactgaagatgtgggaaag
aaaattgagattacttctgtcgacctggttctgggcaatgagacgggcaggtgtgtggtt
ttgagttggcagggaggaggaggagatgctgcttcctcccaggaagccctgcaggctgca
cgttctttcaaaagacgacctaaactccctgacaatgaggttcactgggacagcataatc
atccaggcaagcacaatgatcatttccagagttccaaacatttctgtgcatttgcaacat
gagcctcctgccctgacaaatgaaatgtattgtttggttgtgactgttcaatctcatgag
aagacccagatcagagatgtgaaactcactgctggtttaaaaccaggacaggatgcgaac
ttaactcagaaaactcatgtgactcttcatggaacagaactgtgtgatgagtcctaccct
gctttacttactgacattcctgttggagacttacatccaggagaacagctggaaaaaaca
ttgtatgttcgctgtggaacagtgggctccaggatgtttcttgtgtatgtttcttacctg
atcaatacaactgttgaagaaaaggaaattgtttgcaagtgccacaaggatgaaaccgta
acaatagaaactgtctttccatttgatgttgcggttaagtttgtttccacaaagtttgag
aacctggaaagggtctatgctgacatcccttttctgctgatgacggaccttttaagcgcc
tcaccatgggccctcactattgtatccagcgaactacagcttgctccctctatgactgca
gtggatcagttagagtcccagctggacaaagttgtcttacagactggagagagtgctagt
gaatgcttttgtcttcgatgcccatctgttggaaatgaaggtggagtagcaactggacat
tatattatctcctggaagaggacttcagccatggaaaacatccctgtcatcagtacagtc
atcacgctgccacatgtgattgtagaaaatatccctctccatgtgaatgcagatttgcca
tcgtttgggcgtgtcagagaatctttacctgtcaagtatcacctacagaacaagactaac
ttagttcaggatgtggaaatttctgtggagcccagtgatgccttcatgttctcaggtctc
aaacagattcgattacgcattctacctggcaccgaacaggaaatgttatataatttctac
cctctaatggccggataccagcaactgccatctctcaacatcaacttgcttagatttcca
aatttcacaaatcagctgctcaggcgttttatacctaccagtatttttgtaaagccacag
ggtcgactcatggatgatacttctattgctgctgcatga
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