Sciurus carolinensis (gray squirrel): 124983739
Help
Entry
124983739 CDS
T08117
Name
(RefSeq) chromaffin granule amine transporter-like
KO
K08155
MFS transporter, DHA1 family, solute carrier family 18 (vesicular amine transporter), member 1/2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04082
Neuroactive ligand signaling
ncar04721
Synaptic vesicle cycle
ncar04726
Serotonergic synapse
ncar04728
Dopaminergic synapse
ncar05012
Parkinson disease
ncar05030
Cocaine addiction
ncar05031
Amphetamine addiction
ncar05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
124983739
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
124983739
04726 Serotonergic synapse
124983739
04721 Synaptic vesicle cycle
124983739
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
124983739
09165 Substance dependence
05030 Cocaine addiction
124983739
05031 Amphetamine addiction
124983739
05034 Alcoholism
124983739
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncar02000
]
124983739
Transporters [BR:
ncar02000
]
Solute carrier family (SLC)
SLC18: Vesicular amine transporter
124983739
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
124983739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
CPP1-like
S_4TM
Motif
Other DBs
NCBI-GeneID:
124983739
NCBI-ProteinID:
XP_047407216
LinkDB
All DBs
Position
4:16777723..16798369
Genome browser
AA seq
472 aa
AA seq
DB search
MLRTVLDAPQRLLEEGRGSRQLVLVVVFVALLLDNMLLTVVVPIVPTFLYALEFKEVNSS
VHTSLSVGSQQALALPAFSAIFSFFDNTTIAVEQSAPRGTVGTNGSSGTVPPPVTEANTA
PRNNCQQDTEFLEEENIRVGILFASKALMQLLVNPFVGPLTNRIGYHIPMFAGFVIMFLS
TIMFAFSATYTLLFVARTLQGIGSSFSSVAGLGMLASVYTDDHERGRAMGIALGGLALGV
LVGAPFGSVMYEFVGKSAPFLILAFLALLDGALQLCILKPSKVSPESAKGTPLLMLLKDP
YILVAAGSICFANMGVAMLEPTLPIWMMQTMCSPEWQLGLAFLPASVSYLIGTNLFGVLA
NKMGRWLCSLIGMVVVGASLLCVPLAHSIFGLIGPNAGLGFAIGMVDSSLMPIMGHLVDL
RHTSVYGSIYAIADVAFCVGFAIGYSEPGLPHGDPDVCNPEVHEGISPGGEQ
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgcactgtcctggatgctcctcagaggttgctggaggaaggcagagggtcgcga
cagctggtcctcgtggtggtgttcgttgctctgctcctggacaacatgctgcttactgtg
gtggtgcccatcgtgcccacctttctgtatgccttggagttcaaagaagtcaattcttct
gtgcacaccagcctctccgtgggttcccagcaggccctcgcccttcctgccttttccgcc
atcttctccttctttgacaataccaccatagctgtggaacaaagtgcacccaggggcaca
gtagggacaaatggctcttctggcacagtaccccctccagtcactgaagccaacacagct
cccagaaacaactgccagcaggacacagagttcttggaggaagagaacatccgggttggg
attctgtttgcttcaaaggctttgatgcaacttctggtcaacccattcgtgggacctctc
accaacaggattggatatcacattcccatgttcgctggctttgttatcatgtttctctcc
accatcatgtttgctttttctgccacctataccctgctgtttgtggcccgaacccttcaa
ggcattggatcttccttttcatctgttgcaggtcttgggatgctggccagtgtctacact
gatgaccacgagagaggccgagccatgggaattgccctggggggcctggctttgggggtg
ctggtgggcgctccctttggaagtgtgatgtacgagtttgttgggaagtccgctcccttc
ctcatcttggccttcctggccctgttggatggagcacttcaactttgcatcctgaagcct
tccaaagtctctcctgaaagtgccaaggggactccactgcttatgcttctcaaagaccct
tatatcctggtggctgcaggttccatctgctttgccaacatgggagtggccatgctggag
cccacactgcccatctggatgatgcagaccatgtgctcccctgagtggcagctaggtcta
gctttcttgcctgccagtgtatcctacctcatcggcaccaacctctttggtgtgttggcc
aacaagatgggtcggtggctgtgctccctgattggcatggtggtcgtaggtgccagcttg
ctctgtgttcctctggcccacagtatattcggtctcattggccccaatgcaggcctgggc
tttgccataggcatggtggattcctctctgatgcccatcatgggacacctggtggacctg
cgccacacctcagtgtacgggagcatctatgccatcgccgacgtggctttttgtgtgggc
tttgccataggctattctgagccaggactgccccatggagacccggatgtatgcaaccca
gaagtccacgaaggaatttcccctgggggagaacagtga
DBGET
integrated database retrieval system
