Sciurus carolinensis (gray squirrel): 124983779
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Entry
124983779 CDS
T08117
Name
(RefSeq) neurofilament medium polypeptide-like
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar05014
Amyotrophic lateral sclerosis
ncar05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124983779
05022 Pathways of neurodegeneration - multiple diseases
124983779
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124983779
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
124983779
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
ATG14
DUF1664
Motif
Other DBs
NCBI-GeneID:
124983779
NCBI-ProteinID:
XP_047407298
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All DBs
Position
4:complement(12855900..12861282)
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AA seq
904 aa
AA seq
DB search
MSYTLDSLGNPSAYRRVTETRSSFSRVSGSPSSGFRSQSWSRGSPSTVSSSYKRSALAPR
LAYSSAMLSSAESSLDFSQSSSLLNGGSGGDYKLSRSNEKEQLQGLNDRFAGYIEKVHYL
EQQNKEIEAEIQALRQKQASHAQLGDAYDQEIRELRATLEMVNHEKAQVQLDSDHLEEDI
HRLKERFEEEARLRDDTEAAIRALRKDIEESSLVKVELDKKVQSLQDEVAFLRSNHEEEV
ADLLAQIQASHITVERKDYLKTDISTALKEIRSQLECHSDQNMHQAEEWFKCRYAKLTEA
AEQNKEAIRSAKEEIAEYRRQLQSKSIELESVRGTKESLERQLSDIEERHNHDLSSYQDT
IQQLENELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSTFSGSITGP
LYTHRQPSVTISSKIQKTKVEAPKLKVQHKFVEEIIEETKVEDEKSEMEDTLTAIAEELA
VSAKEEEKEEEAEEKEEEQEAEEEVTPAKKSPVKATAPEIKGEEEGEKEEEEGQEEEEEE
EDEGAKSDQAEEGGSEKEGSSEKDEGEQEEEGETEAEGEGEEAEAKEEKAEEVGAKEELT
AEAKVGKPEKAKSPAPKSPVEEVKPKAEAAVGKGEQKEEDQKVEEDKKKVAKEAPKEEKV
EKKEEKPKDVPEKKKAESPGKEKAESPGKEKAESPAKEKAESPAKEKAESPAKEKAESPA
KEKAESPAKEKAAEEVITTSKTAKVSLEKDAKEEKPQQEKEKEKVEEEGGIEEEGGDQGA
KESRKEDIAVNGEVEGKEEEEQETKEKGSGREEEKGVVTNGLDLSPADEKKGDDRSEEKV
VVTKKIEKITSEGGDGATKYITKSVTVTQKVEEHEETFEEKLVSTKKVEKVTSHAIVKEV
TQSD
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgagctacacgttggactcgttgggcaacccgtccgcctaccggcgggtaaccgagacc
cgctcgagcttcagccgtgtcagcggctccccgtccagcggcttccgctcgcagtcgtgg
tcccgcggttcgcccagcaccgtgtcctcctcctacaagcgcagcgcactcgccccgcgc
ctcgcctacagctcggctatgctcagctccgccgagagcagcctcgacttcagccagtcc
tcgtccctgctcaacggcggttccgggggcgactacaagctgtcccgctccaacgagaag
gagcaactgcaggggctgaacgaccgcttcgccggctacatcgagaaagtgcactacttg
gagcagcagaacaaggagatcgaggcggagatccaggcactgcggcagaagcaggcctcg
cacgcccagctgggcgacgcgtacgaccaggagatccgcgagctgcgcgccacactcgag
atggtgaaccacgagaaggctcaggtacagctggattccgaccacctggaggaagacatc
caccggctcaaggagcgcttcgaggaggaggcacggctgcgcgacgacaccgaggcggcc
atccgagcgctacgcaaagacatcgaggagtcgtcgctggtcaaggtagagctggacaag
aaggtgcagtcgttgcaggatgaggtggccttcctgcgcagcaatcatgaggaggaggtg
gcagacctgctggctcagatccaggcgtcgcacatcaccgtggagcgcaaagactacctg
aagacagatatctcgacggcgctgaaggagatccgctcccagctcgagtgccactccgat
cagaacatgcaccaggccgaagagtggtttaaatgtcgctacgccaagctcaccgaggcg
gccgagcagaacaaggaggccatccgctccgccaaggaagagatcgccgagtaccggcga
cagttgcagtcaaagagcatcgagctggagtctgtgcgcggcaccaaggagtccctggag
cggcagctcagcgatatagaggagcgccacaatcacgacctcagcagctaccaggacacc
atccagcagttggaaaatgagcttcggggaacaaaatgggaaatggctcgtcatttgcgg
gaataccaggatctcctcaacgtcaagatggccctggatatcgaaatcgcagcgtacaga
aaactcctggagggcgaagagaccagatttagcacattttcaggaagcatcaccgggcct
ctgtatacgcaccggcagccctcagtcacaatatccagtaagattcagaaaaccaaagtg
gaggctcccaagttaaaggtccaacacaaatttgtagaggagatcatcgaggaaaccaaa
gtggaggatgaaaagtccgaaatggaagacaccctgacggccatcgcagaggaattggca
gtttctgcgaaggaagaggagaaggaggaagaggcggaagaaaaggaagaggagcaagaa
gccgaagaagaagtgacacctgccaaaaagtctccggtgaaggccaccgccccagaaatc
aaaggagaggaagaaggggaaaaggaggaagaagaaggtcaagaggaggaggaagaggaa
gaagacgagggtgctaagtccgaccaagctgaagagggaggatctgagaaggaaggctct
agcgaaaaagatgaaggtgagcaggaagaagaaggggaaacagaggcagaaggtgaagga
gaggaagctgaagccaaggaggaaaaggctgaagaagtgggtgccaaagaggagctgacc
gcagaagccaaggtgggaaagccagagaaagccaagtccccagcacccaaatctccagtg
gaagaggtgaagccaaaggcagaagccgcagtgggcaaaggtgagcagaaagaggaagac
cagaaagtcgaggaagacaagaaaaaggtggccaaggaagctcccaaggaagagaaggtc
gagaaaaaggaggagaagcccaaagatgtgccggaaaagaagaaagctgaatccccaggg
aaggagaaagctgaatccccagggaaggagaaagctgaatccccagccaaggagaaagct
gaatccccagccaaggagaaagctgaatccccagccaaggagaaagctgaatccccagcc
aaggagaaagctgaatccccagccaaggagaaagccgcagaggaggtgattaccaccagc
aaaacagccaaggtgagcttggagaaagatgccaaagaagagaagcctcagcaggagaag
gagaaggagaaagtggaggaggagggaggaattgaggaggaagggggtgaccagggtgca
aaggaatccaggaaggaagacatagctgtcaacggggaggtggaaggaaaagaggaggag
gagcaggaaactaaggagaaaggcagcgggagggaagaggagaaaggcgtggtcactaac
gggctagacttgagcccagcagatgaaaagaagggggatgacagaagtgaggagaaagtg
gtggtgaccaaaaagatagaaaaaatcaccagtgaggggggcgatggtgctaccaaatac
atcactaaatccgtaaccgtcactcaaaaggtcgaagagcatgaagagacctttgaggag
aaactagtgtcaactaaaaaggtagaaaaagtcacttcacacgccatagtaaaggaagtc
acccagagtgactaa
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