Sciurus carolinensis (gray squirrel): 124983857
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Entry
124983857 CDS
T08117
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1B-like isoform X1
KO
K05141
tumor necrosis factor receptor superfamily member 1B
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04060
Cytokine-cytokine receptor interaction
ncar04061
Viral protein interaction with cytokine and cytokine receptor
ncar04668
TNF signaling pathway
ncar04920
Adipocytokine signaling pathway
ncar05014
Amyotrophic lateral sclerosis
ncar05022
Pathways of neurodegeneration - multiple diseases
ncar05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
124983857
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124983857
04061 Viral protein interaction with cytokine and cytokine receptor
124983857
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
124983857
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
124983857
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124983857
05022 Pathways of neurodegeneration - multiple diseases
124983857
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ncar04050
]
124983857
04090 CD molecules [BR:
ncar04090
]
124983857
Cytokine receptors [BR:
ncar04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
124983857
CD molecules [BR:
ncar04090
]
Proteins
124983857
SSDB
Ortholog
Paralog
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Motif
Pfam:
TNFR_c6
TNFR_ELAPOR1_6th
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
124983857
NCBI-ProteinID:
XP_047407436
LinkDB
All DBs
Position
1:complement(200577622..200605194)
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AA seq
453 aa
AA seq
DB search
MAPTGLWATLAVGLQLWAAGHAVPAQVARAPYAPAPGSTCRQNEYYQETAQVCCSKCEPG
HHAKQLCTQTADTVCVPCEVSTFTQVWNVVDECMSCRSRCEADQVETQACTQKRNRLCTC
RPGWYCALKHQDSCRQCLALRRCPPGFGVARPGTATSDVRCAPCPRGTFSNTTSSTDVCK
PHRICSLVAIPGSASADAVCEPVSSTLGEAPGTVRTPQPVSTRSQPLEPTPGPSMAPSTS
LLLPVQNTDWSSVSLPIGLIVGLTALGLLVIGLVNCVIVAQKKKPSCLQRGAKPHLPADE
GQSAPGLEQQHLLTTAPSSSSSSLESSASAADRGASRGPQPQPPGTEEASQSREAQASPR
SSESSPGGPGTQVSVTCIVNVCSSSDHGLQWSQASSTAGDPDSSPSGSTRDEQVPFSKEE
RPFQSQLETPETLPQSSEKPLPLGVPDAGMKLS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaccggcctctgggccacgctggccgtcggactgcagctctgggcggcgggg
cacgccgtccccgcccaggttgcacgggcgccctacgccccggcacctggcagcacgtgc
cggcagaacgagtactaccaggagacggcgcaggtctgctgcagcaagtgtgagcctggc
caccatgccaaacaattgtgcacccagacggccgacaccgtgtgtgtcccctgcgaggtc
agcaccttcacccaggtctggaacgtggtggacgagtgcatgagctgccggtcccgctgc
gaggccgaccaggtggaaacccaagcctgcacgcagaagcggaaccgcctgtgcacctgc
aggcccggctggtactgcgcgctgaagcatcaggacagctgccggcagtgcctggcgctg
cgcaggtgcccgcccggcttcggcgtggccaggccaggaactgcaacctcagatgtgagg
tgtgccccttgtccccgagggacgttctccaacaccacttcatccacagacgtctgcaag
ccccaccgcatctgtagcttggtggccatccctggcagtgcaagtgcagatgcggtctgc
gaacctgtgtcttctaccctgggagaggccccggggacagtccgcacaccccagccggtg
tccacaagatcccagcccctggagccaactccagggcccagcatggctccgtccacctcc
ctcctcctgcccgtgcagaacacagattggagcagcgtctctcttccaattggactgatt
gtggggctgaccgccctgggcctgctggtgataggactggtgaattgtgtcattgtcgcc
cagaagaagaagccctcctgcctgcaaagaggagccaagcctcacctgccggccgacgag
ggccagagcgcgcccggcctcgagcagcagcacctgctgaccacggcacccagctccagc
agcagctccctggagagctcggccagtgccgcggacagaggcgcgtcccgcgggccccag
ccgcagccgcccggcacggaggaggccagccagtccagggaggcccaggccagcccccgg
agctcagagtcctcccctggcggccccgggacccaggtcagcgtcacctgcatcgtgaac
gtctgcagcagctccgaccacggcttgcagtggtctcaagccagctccacagcgggggac
ccggacagcagcccctcgggctccacgagggacgagcaggtccccttctccaaggaggaa
cgcccctttcagtcccagctggagaccccagaaactctgccgcagagctcggagaagccc
ctgcctcttggtgtgcccgatgctggcatgaagctcagttaa
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