Sciurus carolinensis (gray squirrel): 124983931
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Entry
124983931 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: stabilin-2-like
KO
K19013
stabilin-2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124983931
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ncar00536
]
124983931
Glycosaminoglycan binding proteins [BR:
ncar00536
]
Hyaluronan
Cell surface receptors
124983931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
EGF
FXa_inhibition
cEGF
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
124983931
NCBI-ProteinID:
XP_047407571
LinkDB
All DBs
Position
4:159160809..159316458
Genome browser
AA seq
2546 aa
AA seq
DB search
MLPLTVVLLGLVVQNFCSLAETTGQAKRCDKESLLTIRTQCRSCSLNVEIECPDGYTKIT
NKSVGVRDCRYAFEIRTYSLSLPGCRHICRKNYLQPECCPGHWGPDCMECPGGAGSPCSG
RGSCAEGMEGNGSCSCQEGFGGAACETCADDNLFGPNCSGVCNCVHGVCHGGLAGDGTCE
CFSAYTGPSCDKPIPECAALHCPENSRCAPSSEDETKLECKCLPNYKGTSRHCEPINPCL
QEVCHPQAHCTFLGPNRHSCACQAGYRGDGHVCLPVDPCQTNFGNCPTQSTVCKYDGPGQ
SHCECKEHYQNFVPRVGCSMTNICESNNPCHRNANCTTVAPGQTECTCHKGYVGDGATCY
GNIMERLRELNTDPRGKWQGSLTSFISLLDKTYAWPLSNLGPFTVLLPSDNGLKGFNVKE
LLMDSKSAQYFVKLHIIAGQMDTEHLNNTDTFYTLTGMSGEIFNRDKDNQLKLKLYRGKK
KVKIIQGNIIASNGLVHILDRAMDKIEPTFESNPQQTIMTMLQPRYSKFRSLLEETNVGH
ALDEEEVGGPYTIFVPNNEALDNMQEGTLDYLLSAEGSRKLLELVRYHIVPFTQLEVATL
VSTPHIRSMANQVIQFNTTSNGQILANNVAMEEIEVTAKNGRIYTLTGVLIPPSIVPILP
HRCDETKREMKLGSCVRCSLADWSRCPANSEPTALFTHKCVYRSRMSLKSGCARYCNASV
QVPKCCKGFYGPDCHPCPGGFSHPCSGNGQCADGSRGNGTCVCDDGFRGSRCQFCSDPSK
YGPRCDKKCLCVHGTCNNRVDSDGACLAGTCTDGSAGRFCDKQTSACGPYVQFCHIHATC
EYSDGTASCVCKEGYEGDGVQCSERDPCMGSSPGGCSRNAECVKTSTGTHTCVCQQGWTG
DGRDCLEINNCLLPGAGGCHDNATCLYVGPGQNECECKKGFRGNGIDCEPIISCLEQTGK
CHPLASCQLAASGIWSCVCQEGYEGDGLLCYGNAAVELSFLSEAAIFNQWITNASLQPML
STTSNLTVLVPSQQAVENMDQDEKAFWLSQSHIPALIRYHTLLGTYGMADLQNLTSSDML
ATSLQGNFLHLEKVDGNITIEGASIVDGDNAATNGVIHIISKVLVPRRGLTGSLPNLLTR
LNQMPDYSIFRGYIIHYNLANAIEAADAYTVFAPNNEAIENYVREKKVTTLEEDILRYHV
VLDEKLLRNDLHQGMHRETMLGFSYLLGFFLHHDQLYVNEAPINYTNVATDKGVIHGLGK
VLEIQRNRCDKNDTIIVRGKCGKCPQKPICPLGTKPLGDETRKCIYTIYFMGKRSVFIGC
QPKCVKTVITRACCAGFFGPQCQACPGKAQNACFGNGICLDGVNGTGVCECEQGFSGTAC
ETCTEDKYGIHCDQACPCVHGRCNQGPSGDGSCECDVGWRGVRCDSAITIDNCNGTCHTS
ANCLLNPDGTASCKCAAGFQGNGTVCTAINACEISNGGCSAKAICKRTSPGSRVCMCKEG
YTGDGIVCLEINPCLENNGGCDKNAECTQTGPNQAACNCLPKYTGDGKTCTLINICLTKN
GGCSPFAICNYTAKDGRTCTCKANYTGDGFTCRGNIYQELPKDPNTSQYFFQIQTHVIRE
LAGPGSFTVFAPLSSAFDKEPQIKDWDRQGQMPQILRYHVVACQQLLLENLKLTPNATSL
QGEQIVISVSQDTVYLNNKAKIISSDVITTNGIIHIIDKLLSPQNLLITPRDTSGKILQN
LTTVAVKHGYSRFSKLIQDSGLLSVITDPIHTPVTLFWPTDQALQALAPEQQNFLFDQVN
KDKLKEYLKFHVIRDSKVLAADLPRSAWKTLQGSELSVTCGAGSDVGELFLNGQMCRVVQ
RELLFDLGVAYGINCLLTDPTLGGRCDTFTTFNVSGDCGSCASTPRCPRWSKPKGVMQKC
LYNLLPFKRNLEGCQRQCVLVIQLPRCCKGYFLPDCQACPGGPDTPCNNRGVCLQQYSAT
GQCQCSTGFNGTACELCWPGRFGPDCQPCSCSEHGQCDDGITGSGQCLCETGWTGRFCDT
PAALPPVCTPPCSAHATCMQNNTCECHLNYEGDGITCTVVDFCKQNNGGCAKVAKCSQKG
TKVSCSCPKGYQGDGHSCTEVDPCADGLNGGCHEHATCRKTGPGRRKCECKSHYVGDGLD
CQPEQLPLDRCLQDNGQCHADADCTDLHFQDTTVGVFHLRSPLGQYKLTFDKAREACANE
SATMATYNQLSYAQKASYHLCSAGWLESGRVAYPTAYASQNCGNGVVGIVDYGPRNNKSE
MWDVFCYRMKDVNCTCKAGYVGDGFSCSGNMLQVLMSFPSLTNFLTKVLAYSNSSARGQA
FLKHLTDLSIRGTLFVPQNGGLGKNEVLSGRDIEHHFTNVSIXFYNDLVNGTTMQTRLGS
QLLITASHDQLQMKETRFVDGRAILQWDIFASNGIIHIISRPLKAPPMPTTSSHTGLGTG
IFFAIILVIGAIASAAYSYFRLNRRTIGFQHFESEEDINVSAFGEPENITNPMYESVTSA
PPEPSCNIFADSGEQQLDSSDPLGTL
NT seq
7641 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccttaacggtggttttgcttgggttggttgtgcagaatttctgctccctggct
gaaaccacaggtcaggcaaaaagatgcgataaggagtctcttctgacaattaggacccag
tgccgatcctgctcacttaatgttgaaattgagtgcccagatggttataccaagataacc
aacaaatctgtaggagttcgggattgcaggtacgcctttgagatcagaacatactctcta
tctctccctggatgccgccatatttgcagaaaaaactatctccaacctgagtgttgtcca
ggtcactggggtccagactgcatggagtgcccaggaggagccgggtcaccctgcagtggc
aggggtagttgtgctgaaggcatggaaggaaatgggagctgctcctgccaggaggggttt
ggtggagcagcctgtgaaacctgcgctgatgacaacttgtttggccccaactgttccgga
gtgtgcaactgtgtgcatggcgtgtgccacgggggactagcaggcgatgggacctgcgag
tgcttctctgcctacactggccccagctgtgacaaacccatccccgagtgcgcagcttta
cactgtccagaaaattccagatgtgcaccttccagtgaagacgaaaccaaactagaatgc
aaatgccttcccaattacaaaggcaccagcaggcactgtgagcccatcaatccgtgttta
caagaagtctgccaccctcaggctcactgcacgttcctgggaccaaatcggcacagttgt
gcgtgccaagcaggctaccgcggggatggccacgtgtgcttgcctgtagacccctgccaa
actaactttggaaactgccctacacagtctactgtgtgcaaatacgatgggcctggacag
tctcactgcgagtgtaaggagcattaccagaattttgtgcctagagtcgggtgcagtatg
accaacatctgtgaatcaaacaacccatgtcacaggaatgcaaactgcaccaccgtcgca
ccgggccaaacagaatgtacctgccataaaggttacgtgggcgacggcgcaacgtgctat
gggaacatcatggagcgactccgagaactaaacactgaccccagaggaaaatggcaagga
agtctgacctcgttcatctccctcctggacaaaacttatgcctggccgctgagtaacctg
ggaccattcactgtgctgctgccctcagacaacggcctgaaaggtttcaatgtaaaagag
cttttgatggacagcaagtctgctcagtattttgtaaaactgcacatcattgctggacag
atggacacagagcatttgaacaacacagacaccttctacaccttgactgggatgtcaggg
gaaatcttcaacagggataaggacaatcaactgaagcttaagctttacagaggcaaaaag
aaagtaaaaattattcaggggaacataattgcctccaacgggctggtgcacatcctcgac
agagccatggacaagatagagcccacatttgagagcaacccccagcaaaccataatgaca
atgctgcaaccaagatacagcaagttcagatccctgctggaggaaaccaatgtgggacat
gccttagatgaggaggaagttgggggaccgtacaccatatttgtcccaaataatgaagca
ttggataacatgcaggaaggcactctcgattacctcctttctgcagagggctctcggaag
cttctggaactcgtcagataccacattgtcccctttacccagctggaagtagccactctg
gtttcgacccctcacattagaagcatggccaaccaggtcatacagttcaacaccaccagc
aacggacagattctggcaaacaatgtggccatggaagaaattgaggtcactgccaaaaat
ggccggatttacaccctgaccggagttctcattcctccctccatcgtcccgattctgccc
catcgatgtgatgaaacgaagagagaaatgaaactgggctcttgcgtgcgctgttccctg
gcggattggagcagatgtcctgccaactctgagcccacagctctcttcacacataagtgt
gtctacaggagcaggatgagtctgaagagcggctgtgcccgatattgtaatgcctctgtg
caggtaccaaagtgctgcaaaggcttctacgggcctgactgccacccatgtccaggaggc
ttctcccacccgtgctctggcaatggacagtgtgcagacggcagccgaggcaacgggacg
tgcgtgtgcgacgacggcttccgagggtcccggtgtcagttctgctcggaccccagtaaa
tacggacctcgctgtgacaaaaaatgtctgtgtgtccacggaacctgcaacaacagagta
gacagcgacggtgcctgccttgctggcacatgcaccgacggctccgctgggagattctgt
gacaagcagacgtcagcctgcgggccctacgtgcagttctgtcacatccacgccacctgc
gaatatagcgatgggacagccagctgtgtttgcaaggaaggatatgaaggggatggggtg
cagtgttccgagagggacccttgcatgggatcgagcccaggaggctgcagccgcaacgca
gaatgcgtcaaaaccagcacggggacgcacacctgcgtgtgccagcagggctggacgggg
gacggaagagattgcctggagatcaacaactgtctgctgccgggtgcaggcggctgccat
gacaacgcaacctgtttgtacgtaggccctgggcagaatgaatgtgagtgcaagaaagga
tttcgaggaaatgggattgactgtgaaccaataatctcatgcttggagcaaactgggaaa
tgtcatccactggccagctgtcagttggctgcttctggaatctggagctgtgtttgtcaa
gagggttatgaaggagatggcctcctgtgctacggaaatgcagccgtggaattgtcattt
ctctccgaagcagctatatttaaccaatggataactaatgcgtctctacaacccatgctg
tccaccacctccaacctcactgtcctcgtgccctcccagcaagccgtggagaatatggac
caagacgagaaagccttctggttatcacagagccacatcccggccttgataagataccac
acgctcctcggcacgtatgggatggcagatctgcagaacctgacgtcttctgacatgctg
gccacatctttgcagggcaacttccttcacctggagaaggtggacgggaatatcaccatc
gaaggagcgtccattgtagatggtgacaatgcggccaccaacggggtgatacacatcatc
agcaaggtgctggtcccccgaagaggactaactggctccttgccaaacctgctcacccgg
ctgaaccagatgccggactactccatcttccggggctacatcattcactataatctggca
aatgcaatagaggctgctgatgcttacacggtgtttgctccaaacaatgaagccattgag
aattacgtcagggagaagaaggtcacaactctggaggaggacatcctgcggtaccacgtg
gtcctggacgagaagctcctgaggaacgacctgcaccagggcatgcaccgggagaccatg
ctgggcttctcctacctcctcggcttctttctccaccatgaccagctctatgtaaacgag
gctccaataaactacaccaatgttgccactgacaagggagtgatccatggcctggggaaa
gttctggaaatccagaggaatcgatgtgataaaaatgacaccattattgtacggggaaag
tgtggaaagtgtccccagaagcccatctgcccactaggaactaaaccactaggcgatgag
acgaggaaatgcatctataccatttatttcatgggaaagcggtccgtgttcatcgggtgc
cagcccaagtgcgtgaagactgtcattaccagagcgtgctgtgcgggcttctttggtccc
cagtgccaggcctgccccgggaaggcccagaacgcctgcttcgggaacggcatctgtttg
gacggtgtgaacggcacgggcgtgtgtgagtgtgagcagggcttcagcgggacggcctgc
gagacctgcaccgaggacaagtacggcatccactgcgaccaagcatgtccttgtgtccac
gggagatgcaaccaaggaccctcgggtgacggctcctgtgaatgtgacgttggctggcga
ggcgtgagatgcgacagcgcaatcaccatagacaactgcaatgggacctgccacaccagt
gccaactgccttctcaacccggatggtacagcctcatgcaaatgcgcggcaggattccaa
ggcaacgggacagtctgcacagccatcaacgcctgtgagatcagcaacggagggtgctcc
gccaaggccatctgcaaaagaaccagccctgggagccgggtgtgcatgtgcaaggagggc
tatacgggcgatggcatcgtgtgcctcgaaatcaacccatgtttggagaacaacggcgga
tgtgacaagaacgcagagtgcacacagacgggacccaaccaggctgcctgtaactgtttg
ccgaagtacaccggagatgggaagacctgcacactcattaacatctgcttaaccaaaaat
ggcggctgtagtccatttgccatctgcaattacactgcaaaagatggaaggacctgcacc
tgcaaggcgaactacactggggatggatttacctgccgtggcaacatctaccaggagctt
cccaaggacccaaacacctcccagtatttcttccagatccagacgcatgtcattcgagaa
ctggctgggcctggctccttcactgtttttgcacctctgtcttcagcctttgacaaggaa
ccccagatcaaagactgggacagacaaggccaaatgccccagattcttcgctatcacgtg
gtcgcctgccagcagctgctactggagaacctgaaactgaccccaaacgctacttccctc
caaggagagcagattgtcatctccgtctctcaggatacagtatacttaaacaataaggct
aagatcatatccagtgatgtcatcactactaatggaatcatccatattatagacaaatta
ctatctccccaaaacttgcttatcacccccagagacacctccgggaagattctgcaaaat
cttacaacggtggcagtgaagcacggctacagcagattcagcaagttaatacaggactcg
ggcttgctgagtgtcatcactgaccccattcacacccctgtcactctcttctggcccacg
gaccaagccctgcaagccctggcccctgaacaacagaatttcctgttcgaccaagtcaac
aaggacaagctgaaggagtacttgaagttccacgtgatccgagattccaaggtgttagct
gccgacctgccccgatctgcctggaagaccctgcagggttcggagctcagtgtgacgtgt
ggagctggcagtgacgtcggcgagctctttctaaatggccagatgtgcagagttgtgcag
cgagagctcctgtttgacctgggcgtggcctacggcatcaactgtctgctgacggacccc
accctgggaggccgctgtgacacctttaccactttcaatgtctcgggggactgtgggagc
tgtgccagcactcccagatgcccgcggtggagcaaacccaagggggtgatgcagaagtgt
ctttacaacctgctgccgttcaagaggaacctggaaggctgccagcggcagtgtgtgttg
gtgatccagctgcccaggtgctgcaagggctacttcctgccagactgccaggcctgcccc
ggaggacccgataccccgtgtaacaacaggggcgtctgcctccagcagtactcggccacg
ggacagtgccagtgcagcaccggcttcaacgggactgcgtgcgagctgtgctggccgggg
agattcgggcctgactgtcagccctgcagctgctcagagcacggacagtgtgacgatggc
atcacaggctccggacagtgtctgtgtgaaaccgggtggacgggccgcttctgcgacact
ccggcagcgctgccccctgtatgcacgcctccttgttcggctcatgccacctgtatgcag
aacaacacctgcgagtgccacctgaactatgaaggcgacggaataacctgcacagttgtg
gacttctgcaaacagaacaacgggggctgtgccaaggtcgccaagtgctcccagaagggc
accaaagtctcctgcagctgcccgaagggttaccagggagatggccacagctgcaccgag
gtagacccctgcgcagacggcctcaacggcgggtgtcacgagcacgccacctgcaggaag
accggcccgggcaggcgcaagtgtgaatgtaagagtcactacgtgggggacgggctggac
tgccagccagaacagctgcccctggaccgctgcttacaggacaatggacagtgtcatgcc
gacgcggactgcaccgacctccacttccaggataccactgttggggtgttccatctccgc
tctccactgggccagtacaagctgacctttgacaaagccagagaggcctgtgccaacgaa
tctgccaccatggccacctacaaccagctgtcctatgcccagaaggctagttaccacctc
tgttctgccggctggctggagagtgggcgggtggcctaccccacagcctatgcttcccag
aactgtggcaacggggtggttgggatcgtggactatggacccagaaacaacaagagtgag
atgtgggacgtcttctgctaccgcatgaaagatgtgaactgcacctgcaaggccggctac
gtgggtgatggcttctcatgcagtgggaacatgctgcaggtcctgatgtccttcccctcg
ctcacgaacttcctgacgaaagtcctggcctactccaacagctcagccagaggccaggcg
tttctgaaacacctgactgacctgtccatccgcggcaccctctttgtgccacagaacggt
gggctggggaaaaatgaggtcctgtctgggcgggacatcgagcaccacttcaccaatgtc
agcatcnttttttacaatgatcttgtcaatggtaccaccatgcaaacaaggctgggaagc
cagctactcatcactgccagccatgaccagctccaaatgaaggagaccaggtttgtggat
ggaagagcaattctgcagtgggacatctttgcctccaatggaatcattcacatcatttcc
aggcctttaaaggcaccccccatgcccacgacctcgtcccacactggcctgggaacaggg
atattctttgctatcatcttggtcattggagcaattgcttcagctgcctattcttacttc
cggctaaaccggagaacaattggcttccagcattttgagtcagaagaggacatcaatgtc
tcggcctttggtgagccagagaacatcacaaaccccatgtacgagagcgtgacctcagcg
cccccagagccttcctgcaacatctttgctgactctggtgagcagcagctggacagcagt
gaccccttggggacattgtaa
DBGET
integrated database retrieval system
