Sciurus carolinensis (gray squirrel): 124984043
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Entry
124984043 CDS
T08117
Name
(RefSeq) acid-sensing ion channel 1 isoform X1
KO
K04829
acid-sensing ion channel 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
124984043
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124984043
Ion channels [BR:
ncar04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
124984043
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Motif
Pfam:
ASC
EFP
Motif
Other DBs
NCBI-GeneID:
124984043
NCBI-ProteinID:
XP_047407783
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Position
4:110393230..110419589
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AA seq
758 aa
AA seq
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MELKAEEEEVGGVQPVSIQAFASSSTLHGLAHIFSYERLSLKRALWALCFLGSLAVLLCV
CTERVQYYFHYHHVTKLDEVAASQLTFPAVTLCNLNEFRFSQVSKNDLYHAGELLALLNN
RYEIPDTQMADEKQLEILQDKANFRSFKPKPFNMREFYDRAGHDIRDMLLSCHFRGEVCS
AEDFKVPLEKMPIQIFCSVSFSSGEEVPGSLGDVWGPHHHHQQQQNSSESEEEEEKEKDA
SKKEAIKGASPVDLVAFANRCTLHGASHVFVEGGPGPRQALWAVAFVLALGAFLCQVGDR
VAYYLSYPHVTLLDEVATTELAFPAVTFCNTNAVRLSQLSYPDLLYLAPMLGLDESDDPG
VPLAPPGPEAFSGEPFNLHRFYNRSCHRLEDMLLYCSYRGGPCGPHNFSVVFTRYGKCYT
FNSGRDGRPRLKTMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPP
FIDQLGFGVAPGFQTFVACQEQRLIYLPPPWGTCKAVTMDSDFFDSYSITACRIDCETRY
LVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDQEYCVCEMPCNLTRYGKELSM
VKIPSKASAKYLAKKFNKSEQYIGENILVLDIFFEVLNYETIEQKKAYEIAGLLGDIGGQ
MGLFIGASILTVLELFDYAYEVIKHKLCRRGKCQKEAKRSSADKGVALSLDDVKRHVRSE
QGGALQASPSPTAQGPPPPCSPSLLCLTVLHRDLWPFP
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaaagctgaggaggaggaggtgggtggtgtccagccggtgagcatccaggcc
ttcgccagcagctccacgctgcacggtctggcccatatcttctcctacgagcgactgtcc
ctgaagcgggcactgtgggccctgtgcttcctgggctcactggctgtgctgctgtgtgtg
tgcaccgagcgtgtgcagtactacttccactaccaccacgtcaccaagctcgacgaggtg
gctgcctcccagctaaccttccctgccgtcacgctgtgcaacctcaatgagttccgcttt
agccaagtctccaaaaatgacctgtaccatgctggggagctgctggcactgctcaacaac
aggtatgagataccagacacacagatggctgatgaaaagcaactggagatattgcaggac
aaggccaacttccgcagcttcaagcccaagcccttcaacatgcgtgagttctatgaccga
gcaggacacgacattagagacatgctgctctcctgccacttccggggggaggtctgcagt
gctgaagacttcaaggtgcccttggagaagatgccaatccagatcttctgctctgtgtca
ttctcctctggagaggaagtcccagggtctttgggagatgtctggggtcctcaccatcac
caccagcaacagcagaacagctcagaatcagaagaggaagaagagaaggaaaaggatgct
tcgaagaaggaggccatcaagggggcttcgcctgtggatttggtggcctttgccaacaga
tgcaccctccatggtgccagccatgtctttgtggaagggggtccagggccaagacaggct
ctgtgggcagtggcctttgtcttggcactaggtgccttcctgtgccaggtaggggaccgt
gttgcttattacctcagctaccctcatgtgaccctgctagacgaagtggccaccacggag
ctggccttcccagcggtcaccttctgcaacaccaatgctgtgcggctgtcccagctcagc
tatcctgacttgctctacctggcccccatgctggggctggatgaaagtgatgatcctggg
gtgccccttgctccacctgggccagaggctttttctggggagccctttaatcttcaccgt
ttctacaatcgctcctgccaccgactggaggacatgctgctctattgctcctatcgcggg
ggaccctgtggccctcacaacttctctgtggtcttcacacggtatggaaagtgctacacg
ttcaactccggtcgagatgggcggccccggctgaagaccatgaagggtgggacagggaat
gggctggagatcatgctggacatccagcaggacgagtacctacctgtatggggggagact
gacgagacgtcctttgaagcgggcatcaaagtacagatacacagtcaggatgaacctcct
ttcatcgaccagctgggctttggtgtggccccaggcttccagacctttgtggcctgccag
gagcagcggctcatctacctgcccccgccctggggcacctgcaaagctgttaccatggac
tcggatttcttcgactcctacagcatcactgcctgccgcattgactgtgagacacgttac
ctggtggaaaactgcaactgtcgcatggtacacatgccaggggatgccccgtactgcact
ccagagcagtataaggagtgtgcagatcctgcccttgacttcctcgtggagaaggaccaa
gagtactgcgtatgtgaaatgccctgcaacctgacccgctatggcaaggagctgtccatg
gttaagatccccagcaaagcctcagccaagtatctggccaagaagttcaacaagtctgaa
cagtacataggggagaacatcctcgtgttggacattttctttgaagtcctcaactatgag
accattgagcagaagaaggcctatgagattgcagggctcctgggtgacatcggtggccag
atggggttgttcatcggggccagcatcctcacggtgctggagctcttcgactacgcctac
gaggttataaagcacaagctctgccgacgcgggaagtgccagaaggaggccaaaaggagc
agtgccgacaagggcgtggcgctcagcctggacgacgtcaaaagacacgtgaggagcgag
caagggggcgccctccaggcctccccttcccccaccgcccaaggaccaccccctccctgc
tcgccgtccctcctttgcctcacagtacttcatagagacctgtggcccttcccgtaa
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