Sciurus carolinensis (gray squirrel): 124984290
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Entry
124984290 CDS
T08117
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124984290
03041 Spliceosome [BR:
ncar03041
]
124984290
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
124984290
Spliceosome [BR:
ncar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124984290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
124984290
NCBI-ProteinID:
XP_047407811
LinkDB
All DBs
Position
1:144496416..144530340
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AA seq
688 aa
AA seq
DB search
MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
GGQKRPLEDGDGSWTSPSSTTHWEGMPSPFKDQPDAKKVAPQNDSFGTQLPPMHQQQSRS
VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQS
AKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKM
VMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGID
VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEII
TDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETI
KSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVP
HGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQ
QAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGNYGDQQNPAP
AGQVDYTKAWEEYYKKMGQQGQTQDYSKAWEEYYKKQGQAVPAPTGAPPGGQPDYSAAWA
EYYRQQAAYYAQTSPQGMPQHPPAPQGQ
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcagactattcaacagtgcctccaccctcctctgggtcagctggtggtggtggcggc
ggcggtggtggtggaggagttaacgatgctttcaaagatgcgctgcagagagcccggcag
attgcagcaaaaattgggggtgatgctggtacatcattaaattcaaatgactatggttat
gggggacaaaaaagacctttagaagatggagatggctcttggacaagtccgagcagtaca
acacactgggagggaatgccctctccttttaaagatcaaccagatgctaagaaagttgct
cctcagaatgactcttttggaacacagttaccaccgatgcatcagcaacaaagcagatct
gtaatgacagaagaatacaaagttccagatggaatggttggattcataattggccgagga
ggtgaacagatatcacgcatacaacaggaatctggatgcaaaatacagatagctcctgat
agtggtggccttccagaaaggtcttgtatgttaactggaacacctgaatctgtccaatca
gcaaaacggttactggatcagattgttgaaaaaggaagaccagctcccggatttcatcat
ggcgatggtcccggaaatgcagttcaagaaatcatgattccagctagcaaggcaggatta
gttattggaaagggaggagagactattaaacaacttcaggaacgggctggagttaaaatg
gttatgattcaagatgggcctcagaacactggtgctgataaaccacttaggattacaggc
gacccatacaaagttcaacaagccaaggaaatggtgttagagttaattcgtgatcaaggt
ggtttcagagaagttcgaaatgaatacggatcaagaataggaggaaatgaagggattgat
gttcccatcccaagatttgctgttggtattgtaataggaagaaatggagagatgatcaaa
aaaatacagaatgatgctggtgttcgaatccagtttaagccagatgatggaacaacacct
gatagaatagcacaaataacaggaccgccagaccgatgtcaacatgctgcagaaattatt
acagaccttcttcgaagtgttcaggctggtaatcctggtggacctggacctggtggtcga
ggaagaggtagaggtcaaggcaactggaacatgggaccacctggtggactgcaggagttt
aatttcattgtgccaactgggaagactggattaataataggaaaaggaggtgaaaccata
aaaagcataagccaacagtctggtgcaagaatagaacttcagagaaatcctccacctaat
gcagaccctaatatgaaattatttacaattcgtggcactccacagcaaatagactatgct
cggcaactcatagaagaaaagattggtggcccagtaaatcctttagggccacctgtaccc
catgggccccatggtgtcccaggcccccatgggcctcctgggcctccagggcctggaacc
ccaatgggaccgtacaaccctgcaccttataatcctggaccacctggcccagctcctcat
ggccctccagccccatatgctcctcaggggtggggaaatgcatatccacattggcagcaa
caggctcctcctgatccagctaaggcaggaacggatccaaattcagcagcttgggctgct
tattatgctcattattatcaacagcaagcacagccaccacctgcagctcctgcaggtgca
ccaactacaacccagactaatggacaaggtaactatggagatcagcaaaatccagctcca
gctggacaggttgattataccaaggcttgggaagagtactacaagaaaatgggtcaacaa
gggcagacacaagattattcaaaggcttgggaggaatattacaagaagcaaggtcaagca
gttcctgctcctactggggctccaccaggtggtcagccagattatagtgcggcctgggct
gagtactatagacaacaagcagcttattatgcccagacaagtccccagggaatgccacag
catcctccagcacctcagggccaataa
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