Sciurus carolinensis (gray squirrel): 124984355
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Entry
124984355 CDS
T08117
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
124984355
Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
124984355
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
fn3
Ig_2
Ig_VEGFR-1-like_5th
LRR_14
DUF480
C2-set_3
Motif
Other DBs
NCBI-GeneID:
124984355
NCBI-ProteinID:
XP_047407831
LinkDB
All DBs
Position
5:complement(134476743..134485403)
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AA seq
623 aa
AA seq
DB search
MWVAVAMLWILTLGGSHQARGSCPSQCSCGLHILGDGNKARTVVCSDPDMTLPPASIPAD
TCRLRVERTAIHRVPGEAFRTLGRLEQLWLPYNALAELSVLMLRGLRRLRELRLPGNRLA
TFPWAALRDAPQLRLLDLQANRLTALPPEAARFLGNLTFLDLSSNQLMRLPQELLLTWVQ
LKTGPFLPGHHSRLVLGLQDNPWVCDCQLYDLVRLLDGWVPNLVFIEARLRCATPRNLAG
VAFSQLELRRCQGPELLPGVTSIKSPLGSAVLLRCGATGVPGPEMSWRRANGHPLNGTVH
QEVSGDGASWTLLDLPAVSHLDSGDYICQAKNFLGASETLISLIVTEPQTSTEQSGIPGA
LWARTGEGVEAAVYNNKLVARHVPHIPEPAVLAIGTSVPNLKEKLALQHFQMGAPGELWE
RQAEPQEARIVKSLKVVGDTYHSVSLVWKAPLAGNTTAFSVLYTVFGQHDMRRVIVPPGK
TSVTIEGLAPKTKYVACVCVRGLVPRKEQCVIFSTDQMVDAEGTQRLINVVVISVAAIIA
LPPTLLVCCGALRRRYRKCRTRGPTEATGAYVNLERLGHSDDGSEELSRHSLSEADRLLS
ARSSLDSQALGTSGGRRINEYFC
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtggcagtggccatgctctggatcctgaccctcggggggtcccaccaggcccgg
ggttcttgtccctctcagtgcagctgcggcctccacatcctgggtgatggcaacaaggcc
aggaccgtggtgtgcagcgatcctgacatgaccctgcccccagcgtctattcctgcggac
acctgcagactgcgtgtggaaaggacggccatacacagggtgcccggagaggccttcagg
acattgggccgcctggagcagctatggttgccctacaatgccctcgcggagctcagtgtc
ctcatgctgcggggactgagacgcctgcgtgagctgcggctgcctgggaaccgcttggcc
accttcccctgggccgcgctcagggacgccccccagctgcggctgctggacctgcaggcc
aaccgcctcacagccttgccgcctgaggcagcgcgcttcctgggaaatctcaccttcctg
gacctttctagcaatcagctgatgaggctcccgcaggaactgctactcacatgggttcag
ttgaagaccgggccctttcttcctggccaccactccaggcttgtcctagggctgcaggac
aacccctgggtgtgtgactgccaactctatgacctggtccgcctgctggatggctgggtc
ccaaacttggtcttcattgaggccagactgaggtgtgccacaccacgtaatctggctgga
gtggccttcagccagctggagctcaggaggtgccagggcccagagctccttccaggggtg
accagcatcaagtcccctttgggaagtgcagtattgttgcgatgtggagccactggagtc
cctggacctgagatgagctggaggagagccaacgggcacccactcaatggcacagtgcac
caggaagtctccggtgacggtgcaagctggactctgttggacttgcctgcagtgtctcac
ctggactctggagactacatctgccaggccaagaacttcctgggagcctctgagactctt
atctccctgattgtcacagagccccagacatccacagaacagagtgggattccaggggca
ctttgggcaaggacaggggaaggggtggaagctgctgtttataacaacaagctggtggcc
cgacatgtcccccatattcctgaacctgcagtcctggccatcgggacctctgtgcccaac
ctgaaggagaagttggccctccaacacttccagatgggtgccccaggagagctctgggaa
aggcaggctgaaccccaggaggcccggatagtgaaatctctcaaggtggtgggggacact
taccacagcgtgtccttggtatggaaggcccccctggctgggaacacaacggcctttagt
gtcctttacacagtttttgggcagcatgacatgcgccgcgtgatcgtgccaccggggaag
accagtgttaccatcgagggactggcacccaagaccaagtatgtggcatgtgtctgtgtg
cggggcctggtgccacggaaggagcaatgcgtcatcttctccaccgaccagatggtggat
gccgagggcacccagcggctcatcaacgtggtggtgatcagcgtggctgccatcatcgcc
ctgccgcccacactgcttgtctgctgcggagctctccggaggcgctaccgcaagtgccgc
acccggggccccacggaggccacgggcgcctacgtcaacctggagaggctgggccacagc
gatgacggttcagaggagctgtctcggcacagccttagtgaggccgacaggcttctttca
gcccgttccagcctggattctcaggctctggggaccagcgggggcagaaggatcaacgag
tacttctgctga
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