KEGG   Sciurus carolinensis (gray squirrel): 124984360
Entry
124984360         CDS       T08117                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC4-like
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03020  RNA polymerase
ncar03420  Nucleotide excision repair
ncar04623  Cytosolic DNA-sensing pathway
ncar05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124984360
  09124 Replication and repair
   03420 Nucleotide excision repair
    124984360
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    124984360
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    124984360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ncar03021]
    124984360
   03400 DNA repair and recombination proteins [BR:ncar03400]
    124984360
Transcription machinery [BR:ncar03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     124984360
  RNA polymerase III system
   RNA polymerase III
     124984360
  RNA polymerase I system
   RNA polymerase I
     124984360
DNA repair and recombination proteins [BR:ncar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      124984360
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 MCM_OB Cytochrome_C7 DmmA-like_C HypA DUF5816 A2L_zn_ribbon Zn_ribbon_13
Other DBs
NCBI-GeneID: 124984360
NCBI-ProteinID: XP_047407840
LinkDB
Position
5:complement(87177890..87178066)
AA seq 58 aa
MDTQKDIQPPKQQPMIYICGECHTENEIKSRDPIRCRECRYRIMYKKRTKSLVVFDAR
NT seq 177 nt   +upstreamnt  +downstreamnt
atggatacccagaaggacattcaacccccaaagcagcaaccaatgatatatatctgtgga
gaatgtcacacagaaaatgaaataaaatctagggatccaatcagatgcagagaatgtaga
tacagaataatgtacaagaaaagaaccaaaagcttggtggttttcgacgctcgatga

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