Sciurus carolinensis (gray squirrel): 124984438
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Entry
124984438 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: catenin alpha-1-like
KO
K05691
catenin alpha
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04390
Hippo signaling pathway
ncar04520
Adherens junction
ncar04670
Leukocyte transendothelial migration
ncar05100
Bacterial invasion of epithelial cells
ncar05200
Pathways in cancer
ncar05213
Endometrial cancer
ncar05226
Gastric cancer
ncar05412
Arrhythmogenic right ventricular cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
124984438
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124984438
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
124984438
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124984438
09162 Cancer: specific types
05226 Gastric cancer
124984438
05213 Endometrial cancer
124984438
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124984438
09166 Cardiovascular disease
05412 Arrhythmogenic right ventricular cardiomyopathy
124984438
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124984438
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124984438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Rotamase
Rotamase_3
GIT1_C
NagJ_C
DivIC
PipB2_N
Motif
Other DBs
NCBI-GeneID:
124984438
NCBI-ProteinID:
XP_047407974
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All DBs
Position
5:complement(47840981..47845634)
Genome browser
AA seq
904 aa
AA seq
DB search
MTAVHTGNFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNANSKGSSNKKRGRSKKAHVLI
ASVEKATENFLEKGDKIAKESQFLKEELVAAVEDVRKQGDLMKSAAGEFADDPCSSAKQG
NVGWAARALLSAVTRLLILADMTDVYKLLAQLKVVEDGILKLRNAGNEQDLGIQYKALKP
EVNKLNIMAAKRQQELKDVGHRDQMAAARGILQKNVPVLYTASQACLQHPDVAAYKANWD
LIYKQLQQAVTGISSAAQATSSDDASQHPGGGGGELAYALNNFDKQIIVDPLSFSEERFR
PSLEEHLESIISEVALMAGSSCTRDDRRERIVAECNAVRQALQDLLSEYMGNAGCKERSD
ALDSAIDKMTKKTRDLRRQLRKTVMDHVSDSFLETNIPLLVLIDTAKNGNEKEVKEYAQV
FVNXCHKLIEVASLACSISNTEEGVKLVRMSASQLEARCPQVINAALALAAKPQSKMAQE
NMDLFKEQWEKQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIAFQEKDVDGLDHMA
GVIQGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMLHFTEQVEAAIEALNSDP
AQPMNDNEFIDASRLVYDGIRDIWKAVLMIRTPEELDDSEFETEDFNVRSRTSIQTEDDP
QIPGQSAPAIIAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKRMCMI
MMEMTDSTRGKGPLKNTADVISAAKKIAEAGIRMDKLGQTIADHCPDSACKQDLLAYLQC
ITLYCHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTK
YQKSQGMASLNLPAVSWKMKVPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEFKA
MDSI
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgttcacacaggcaacttcaaatgggaccccaaaagtctagagatcaggact
ttggcagttgaaagactgttggagcctcttgttacacaggttacaaccctggtaaacgcc
aacagtaaggggtcctctaacaaaaagagaggtcgttctaagaaggcccatgttttgatt
gcatctgttgaaaaagcaactgagaatttcttggagaagggagataaaattgcaaaggag
agtcagtttctcaaggaggagctcgtggctgctgtagaagatgttcggaagcaaggagat
ttgatgaagagtgctgcaggagagtttgcagatgatccctgttcttccgcgaagcaaggc
aatgtgggttgggcagctcgagctttgctctctgctgttacccggctgctgattttggct
gatatgacagatgtctacaaattacttgctcagctgaaagttgtggaagatggaatcttg
aaactgaggaatgctggcaatgaacaagacttaggaatacagtataaagccctgaaaccc
gaagtgaataagctaaacattatggcagctaaaagacaacaagaactgaaagatgtgggc
catcgtgatcagatggctgcagctagaggaatcctgcagaaaaatgttccagtcctctat
actgcatcccaggcatgcctacagcaccctgatgttgcagcctataaggccaactgggat
ttgatatacaaacagcttcaacaggcggtcacaggcatctccagtgcagcccaggctact
tcatcagatgatgcctcccagcatcctggtggaggaggaggagaattggcatatgcgctc
aataattttgataaacaaatcattgtggaccccttgagcttcagtgaggagcgctttagg
ccttccttggaggagcacctggaaagcataattagtgaagttgccctgatggctggttca
tcctgcacacgtgatgaccggcgtgagcgaattgtggcagagtgcaatgctgtccgccag
gccttgcaggacctgctctcggaatacatgggcaatgctggatgtaaagaaagaagtgat
gcactagattctgcaatagataaaatgaccaagaagaccagggacttgcgtagacagctt
cgcaaaactgtcatggaccatgtttcagattctttcctggaaaccaacattccactttta
gtattgattgacactgcaaagaatggaaatgagaaagaagttaaggagtatgcccaagtt
tttgtgaacnnatgccacaaattgattgaggttgccagcttggcctgttccatttcaaac
actgaagaaggagtaaagcttgttcgaatgtctgcaagccagttagaagcccgctgtcct
caggtaatcaatgctgcattggctttagcagcaaaaccacaaagtaaaatggcccaagag
aacatggatctttttaaagaacagtgggaaaaacaagtccgtgttctcacagatgctgtt
gatgacattacttccattgatgacttcttggctgtctcagagaatcacattttggaagat
gtgaacaaatgtgtcattgctttccaagagaaagatgtggatgggctggaccacatggct
ggtgtgattcaaggccgggcagcccgggtcattcatgtagtcacctcagagatggacaac
tatgagccaggagtctacacagaaaaagtcctggaagctaccaagctgctgtccaacacg
gtcatgttacatttcacagagcaagtggaagcagctatagaagccctcaactcagaccct
gcccaacccatgaatgataatgagtttattgatgcctctcgcctggtatatgatggcatc
cgggacatctggaaagcagtgctgatgataaggacccctgaggagttggatgactctgag
tttgagacagaagatttcaatgtcagaagcaggacaagcatccagacagaagatgaccca
cagatacctggccaaagtgccccagcaatcatagctcagcttccacaggagcaaaaagca
aagattgcggaacaggtggccagtttccaggaagaaaagagcaagctggatgctgaagtg
tccaaatgggatgacagtggcaatgatatcattgtgctggccaagcggatgtgtatgatt
atgatggagatgactgactctacccgaggtaaaggaccactcaaaaatacagcagatgtg
attagtgctgccaagaaaattgctgaggcaggaatcaggatggataagcttggccaaacc
attgcagatcactgtccagactcagcctgcaagcaggacctgctggcctacctgcagtgt
atcaccctctactgccaccagctcaacatctgcagtaaggtcaaggctgaggtccagaac
cttggtggagagcttgtggtctctggggtggacagtgccatgtccctgatccaggcagcc
aagaacttgatgaatgctgtggtacagacagtgaaggcatcctatgtggcctccaccaaa
taccagaagtcccagggcatggcttccctcaaccttcctgctgtgtcctggaagatgaag
gtgcctgagaaaaagcccttggtgaagagagagaagcaggatgagacacagaccaagatt
aagcgggcatctcagaagaagcatgtgaaccctgtgcaggccctcagcgagttcaaagcc
atggatagcatctaa
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