Sciurus carolinensis (gray squirrel): 124984514
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Entry
124984514 CDS
T08117
Name
(RefSeq) nebulin-related-anchoring protein isoform X1
KO
K24421
nebulin-related-anchoring protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124984514
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
124984514
Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
LIM domain-containing proteins
LASP family proteins
124984514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nebulin
LIM
c-SKI_SMAD_bind
Motif
Other DBs
NCBI-GeneID:
124984514
NCBI-ProteinID:
XP_047408149
LinkDB
All DBs
Position
5:complement(160565139..160637275)
Genome browser
AA seq
1730 aa
AA seq
DB search
MNVQACSRCGYGVYPAEKISCIDQIWHKACFHCEVCKMMLSVNNFVSHQKKPYCHAHNPK
NNTFTSVYHTPLNLNAKKLLGAMGGVSDQEDGEQFKSVFHWDMKSKDGPDAPHRQPLANE
RAYWTGYGEGNAWCPGALPDPEIVRMVEARQSLGEAYTEDYEQPRGKGSFPAMITPAYQR
AKKANQLASQVEYRKGHEERISRFTTVADTPELLRAKAGGQLQSEVRYTEDYEEQRGKGS
FPAMITPAYQIAKRANELASDVRYHQQYQREMRGMAGPVGAEGTLKKECADQRGQQGDLE
EYEEPRGKGSFPAMITPAYQNAKKANELASDIKYRQDLHKMRGAAHYHSLPAQDNLVLKR
AQSVNKLVSEVEYKKDLESSKGHSINYCETPQFRNVSKISKFTSDNKYKENYQNHMRGHY
EGVGMDRRTLHALKVGSLASNIAYKADYKHDIVDYNYPATLTPAYQTTMKLVPLKDVNYR
QSIDKLKYSSVTNTPQIVQAKINAQQLSHVNYRADYEKNKLNYTLPQDVPQLVKARANAE
LFSEVKYKEGWEKTKGKGFEMKLDAMSLLAAKASGELASNIKYKEEYEKTKGKAMGTTDS
KLLHSLQVAKMSSEVEYKKGFEESKTHFHLPMDMVNIRHAKKAQALASDLDYRKKLHEYT
VLPEDMKTQWAKKAYGLQSELQYKADLAWMKGVGWLTEGSLNLEQAKKAGQLVSEKNYRQ
RVDELKFTSVTDSAQMEHARKSQELQSGVAYKAGNAQSVHQYTISKDEPLFLQARANAAH
LSEKLYKSSWENQKAKGFELSLDSLTFLAAKAKRDLASEVKYKEDYERSRGKLIGAQGAQ
GDSQMSHSLQMSKLQSDLEYKKGFEDTKSQCHVSLDMIHLAHARQAQHLATDIGYRTVSH
HFTALPTDMKVEWAKKAYGLQSDNQYRADVKWMKGTGWVATGSLNVEQAKKAGELISEKK
YRQHPDALKFTSIKDTPEMVQARISYTQAVDRLYREEGENIKHHYTQTADLPEVLLAKLN
AMNISETRYKESWSKLRDGGYKLRLDAIPFQAAKASSEIISDYKYKEAFEKMKGQMLGSR
SLEDDLSLAHSVHATSLQSDVNYKKGFEHSKAHFHLPLDMVTLVHAKKAQTLASDQDYRH
PLPQHTSLAEDLRLSCAKKAHKLQSENLYRSDLNFMRGVACVVPGTLEIEGRKRASELIS
ESKYRQHPGSFKYTAVTDTPNLLHAKFSSQITNERLYKAAGEDARHQYTMTLGLPEFVRA
KTNAANLSDAKYKESWRHLRAQGYKLTIDALPFQAARASGDIASDFLYRHDFVKERGKLI
GVRSVSDDPRLRHCRLMGQLQSEHQYKREAAGSQAQCHLPMDMVHLVHARKAQALASDHD
YRTQYHEFTALPEDLKMAWAKKAHALQSEFRYKSDLMGMKGTGWLALRSPQIESAKKAGE
LISETKYRKKPDTIKFTTVVDSPDLVHAKNSYVNCNERLYRLGDAESLHRYTLIPDHPEF
TRARLNALHLSDKVYRNSWEQTRAGGYDFRLDAIPFQTARASREIASDFRYKEAFLRDRG
LQIGYRSINDDPRMKHFLNVGKLQSDNEYKKDFAKSRSQFHSRTDQPGFLQAKRSQQLAS
DVHYRQPLPQPTCDPEQLGLKHAQKAHQLQSDVKYKSDLNLIRGIGWTPPGSYKVEMARR
AAELANMRGLGLQASSGEPEAVEAGGHLRGNVNPDATEILHVKRKKALWM
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgcaggcctgctctaggtgtggctatggggtgtatcctgctgagaagatcagc
tgcatcgaccagatatggcataaagcttgtttccactgtgaagtgtgcaagatgatgctg
tctgtgaataatttcgtgagtcaccagaaaaagccatactgtcacgcccataaccccaag
aacaacactttcactagtgtctatcacacaccattaaatctaaatgcgaagaagcttctg
ggagccatgggtggggtcagtgaccaagaagatggtgagcagtttaaatcggtttttcac
tgggacatgaaatccaaggatggacctgatgcacctcacaggcaaccactggcaaacgag
agagcctactggactggatacggggaaggcaacgcctggtgcccgggagctctgccagac
cctgaaatcgtaaggatggttgaggcccgacagtctcttggtgaggcgtatacagaagac
tacgagcagcccagaggaaaggggagctttccggccatgatcactcctgcttatcaaagg
gccaagaaagccaatcagctggccagccaggtggaatacaggaaagggcatgaagagcgc
atctccaggttcaccacggtggcggacacgcctgagctgctgcgggccaaggcaggggga
cagctccaaagtgaggtgagatacacagaggactatgaagagcagagagggaaaggcagt
ttccctgctatgatcacacctgcttatcagatcgccaaaagggccaacgagctggcgagt
gacgtgagataccatcaacaatatcaaagagaaatgagagggatggctggccctgttgga
gctgagggcacattgaaaaaggagtgtgcagaccagcgtggccagcagggtgacttggag
gagtacgaggagcccaggggaaagggcagcttcccagccatgatcaccccagcttatcag
aatgccaagaaggccaatgaacttgctagtgatataaaatacaggcaggacttgcacaag
atgaggggtgctgcacattatcactctcttccagcccaagacaacctggttctcaaacgg
gcccagagtgtgaacaagctcgtgagcgaggtggaatataagaaggatctggaaagtagt
aaaggtcacagtatcaactactgtgaaacgcctcaattcaggaacgtgagcaagatctca
aaattcaccagcgataataaatataaagaaaactaccagaaccacatgagaggccactat
gaaggagttggcatggacagacgtacacttcatgctctgaaagttggcagtctggccagc
aacattgcctacaaggctgattataaacacgatattgtggactacaactacccagccact
cttactcctgcctatcaaacaaccatgaagctggttcccttgaaagatgtcaactacagg
caaagcattgacaagttgaagtacagctctgtgaccaatactccgcagattgtccaagcc
aaaatcaatgcccagcaactgagccacgtgaattaccgcgctgactatgagaaaaacaag
ttgaattacacactgccacaggatgtgccccagctggtgaaggccagagctaatgccgaa
ctcttcagtgaggtgaagtacaaagaaggctgggagaagacaaaggggaaaggatttgag
atgaagctggatgccatgtctctgttggccgccaaagcctctggggagcttgctagcaat
attaaatacaaagaagaatatgagaaaacaaaaggcaaagccatgggaaccacggactcg
aagcttctgcactccctgcaggtggccaagatgagcagcgaggttgaatacaagaaaggc
tttgaagagagtaagacccactttcacctacccatggatatggtaaacatcaggcatgcc
aagaaggcccaggctcttgccagtgacctggactacaggaagaaactgcatgagtacact
gtactgcctgaagacatgaagactcagtgggccaagaaagcctacgggctccagagcgag
ctgcagtacaaggccgacctggcctggatgaagggagtcgggtggctgaccgagggcagt
ctcaatctggaacaggccaagaaggctggacaactggtcagcgagaaaaactaccggcag
agggttgacgagctcaagttcaccagtgtcaccgacagtgcccagatggagcacgccagg
aagagccaggaactgcagagcggggtggcctacaaggcagggaacgcgcagtctgtccac
cagtacaccatcagcaaagatgagcctctcttcctacaggcccgggccaacgctgctcac
ctcagtgagaaactgtacaagagcagctgggaaaaccagaaggcaaaaggatttgagctg
agtcttgactccttgaccttcctggcagccaaagccaagagggacctggcaagcgaggtg
aagtacaaggaggactacgagaggtccagagggaagctcatcggggcgcagggtgcacag
ggagattctcaaatgagccactcgctgcagatgtccaagctgcagagcgacctggagtac
aaaaagggcttcgaggacaccaaatcccagtgccacgtctccctggacatgatccacctg
gcgcatgcccgccaggctcagcacttagccacagacataggctacaggacggtgtcccat
cacttcacagcgttgcccacggacatgaaggtggagtgggccaagaaggcgtacggcctg
cagagtgacaaccaatacagggcagatgtgaagtggatgaaaggcacgggctgggtcgcc
accgggtcattaaatgtggagcaggcaaagaaggcaggagaactcattagcgagaagaag
taccgtcagcatccagatgctttgaagtttaccagtattaaagacactccggagatggtc
caggccagaattagttatacccaagcagtggataggctgtaccgggaggaaggagaaaat
ataaagcatcattacacacagactgcagacctgcctgaggtcctgctggccaagttgaat
gccatgaacatcagcgagactcgttataaggaatcctggagtaaacttcgagacggtgga
tataaactgaggttggacgccattccattccaggcagcaaaggcttccagtgaaatcata
agtgattacaaatacaaagaggcatttgagaaaatgaaaggacagatgcttggctcccgg
agcttggaagatgatctcagccttgcacattcagtgcacgcgacctcactgcagagtgat
gtgaattacaagaaaggctttgaacactcaaaggcgcacttccatctgccattggacatg
gtaaccctggtgcatgccaagaaggctcagaccctggccagcgaccaggactacagacat
ccgctcccccagcacacgtccttggcagaagacctgaggctgagctgtgccaagaaagct
cacaagttgcagagcgagaatctgtaccgctcagacctgaacttcatgcgaggtgttgcc
tgcgtcgttcctggcaccttagagattgaaggaagaaagagggcctctgaactcatcagc
gagagtaaataccgtcagcatcccgggtcgttcaagtacacagccgtgacggacaccccc
aacctcctgcatgcgaagttcagcagccagattaccaatgagcgtctctataaagcagct
ggagaggatgcgagacaccagtacacaatgaccctgggtctgcccgagttcgtccgagcg
aaaacaaacgcagccaacctgagcgacgcaaaatacaaggagtcttggcgtcatctccgt
gctcagggctacaagctgacaatagatgcgctccccttccaggctgcacgggcctctggg
gacatcgccagcgattttctctacagacacgactttgtgaaggagcgagggaagctcatc
ggggtccgcagcgtaagcgatgacccccggctgcggcactgccgcctcatgggccagctg
caaagtgagcatcagtacaagagggaggcggccggcagccaagcccagtgccacctaccc
atggacatggttcacttggtccacgccaggaaggcccaggccctggccagtgaccatgac
tacaggactcagtaccatgagttcacggcgctgcctgaggacttgaagatggcctgggcc
aagaaagcccacgccctgcagagtgagtttcgctacaagtcagacctgatgggcatgaag
gggacaggatggctggcgctgagatccccacagatagagagcgcaaagaaggccggagaa
ctcatcagcgagaccaaataccgtaaaaaaccagacactatcaagttcaccacagtggtt
gactccccagatctggttcacgccaagaacagctatgtgaactgcaacgagcgcctatac
aggttgggggatgcagagtcgttacacagatataccctgatccctgatcaccccgagttc
acccgagcccgcctcaacgccctgcatctgagcgataaagtctacagaaactcttgggag
cagacccgggctggcggctatgacttcaggctggatgccatcccgttccagactgcccgg
gcgtccagggagatcgccagcgacttccggtacaaggaggccttcctgcgggaccggggc
ctgcagattgggtaccgcagcatcaacgacgacccgaggatgaagcatttcctcaacgtc
ggcaagctgcagagtgacaatgagtacaagaaggactttgctaagagccggtcccagttc
cacagccgcacagaccagcctggcttcctccaggccaagaggagccagcaattggccagc
gacgtgcattacaggcagcccctgccccagcccacctgtgaccccgagcagctgggcctg
aagcatgcgcagaaggcccaccagctgcagagtgatgtcaagtacaaatcagacttaaac
ctgatcaggggtatcggctggacccctcccggctcctacaaggtggaaatggctcggcgg
gctgcggaactggccaacatgaggggcctggggctccaggcgtcttctggggagccagag
gccgtggaggctggaggtcatctgagggggaacgtgaacccagatgccacagagattctg
catgtcaaaagaaagaaggctctgtggatgtga
DBGET
integrated database retrieval system
