Sciurus carolinensis (gray squirrel): 124984613
Help
Entry
124984613 CDS
T08117
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124984613
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
124984613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_2
Fuz_longin_3
Motif
Other DBs
NCBI-GeneID:
124984613
NCBI-ProteinID:
XP_047408382
LinkDB
All DBs
Position
5:complement(147097716..147121859)
Genome browser
AA seq
713 aa
AA seq
DB search
MAVTGESYIKMKCVLVATEGAEVLFYWTDEEFKESLQLKFGQSENEEEERPALEDQLSTL
LAPVIISSMTMLEKLSDTYTCFSTENDNSLYVLHLFGECLFIAINGDHTESEGDLRRKLC
VLKYLFEVHFGLVTMDGQLIRKELRPPDLEQRVRVWEHFQSLLWTYSRLREQEQSFAVEA
VERLIHPQLCELSIEALERHVIQAVNSSPERGGEEALHAFLLVHCKLLAFYSSHGASSLR
PADLLALILLVQDLHPSESTAEDDDDGQPSPGRRPGRSQNIPVQQARSPRASGPTKGSSA
ETDTDSFSLTEEYFTPAPSPGQQSSGSTIWLEGGTPPTDVPQIAEDTLQTRVPHSPAPSS
PKRIFLDASVKEIYCPLVPHTMYCLPLWPGINMVLLTKSPSTPLALVLYQLLDGLSLVEK
KLKEGQEAGSALRSQPLLGDLRQRMDKFIKNRGGQEIQSTWLEFKTKAFSKSELGSSWEL
LQVCGKLKRQLCTIYRLSFLTTAPSRGGPHLPQHLLDQVQKLMRERLMDWKDFLLVKSRR
NITMVSYLEDFPGLVHFIYVDRTTGQMVAPSLSSSEKTSSELGKGPLATFVKAKVWALIR
LARQYLQKGYTTLLFHEGDFCFSYFLWFENDMGYKLQMIEVPVLSDDSVPIGVLGGDYYR
KLLRYYSKSHPAEAVRCYELLTLHLSVIPTSLLVQQASQLARRLGEASRVPLP
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaactggagagtcttacatcaagatgaagtgtgtcttggtggccactgagggc
gcagaggttctcttctactggacagatgaagagtttaaagagagtctccagctgaagttt
gggcaatcagagaatgaggaagaagagcgtcctgccctggaggaccagctcagcaccctc
ttggccccagtcatcatctcctccatgacaatgctagagaaactctcagacacatacacc
tgcttctcaacagaaaatgacaactccctgtatgtccttcacctgtttggagaatgcctg
ttcatcgccatcaatggagaccacactgagagcgagggagatcttcggcggaagctctgt
gtgctcaagtacctgtttgaggtgcactttggactggttacaatggatggccagctcatc
cgaaaggagctgcggccccctgacctggagcagcgtgtccgggtgtgggagcacttccag
agcctgctgtggacctacagccgcctacgggagcaggagcagagcttcgctgtggaggct
gtggagcgactgattcacccccagctctgtgagctgagcatagaggcgctggagcggcat
gtcatccaggctgtcaactccagcccagagcggggcggtgaggaggccctgcatgccttc
ctgctagtgcactgcaagctgctggccttctactccagccatggtgcaagttccctgcgg
ccggccgacctcctcgccctcatcctcctggtgcaggacctccaccccagtgagagcaca
gcagaggacgacgatgatggccagccttccccagggaggaggcccggcagaagccagaac
atccctgtgcagcaggcccggagcccacgtgcctcgggcccaaccaaagggagttctgcg
gagacggacacagacagcttctccctcactgaagagtacttcacaccagctccttcccct
ggccagcagagctcaggtagcaccatctggctggaagggggcacccccccaactgatgtt
cctcagatagctgaggacaccctccagacacgggttcctcactccccagcaccatctagc
cccaagaggatcttcctggacgccagtgtgaaagaaatctactgccctttggtaccccat
accatgtattgcctacccctgtggccgggcatcaacatggtgctcttgaccaagagccct
agcaccccgctggccctggtcctgtaccaactgctggatggtctttccctggtggagaag
aagctgaaggagggccaggaggctggcagtgccctgcggtcccagcccctcctaggagac
ctgcgccagaggatggacaaattcatcaagaatcgagggggacaggagattcagagcact
tggctggagtttaagaccaaggccttctccaaaagtgaactgggatcatcctgggagctg
ctccaggtgtgtgggaagctgaagcggcagctctgcaccatctaccgtctgagcttcctg
accacagcgcccagcaggggaggcccacacctgccccagcacctgctggaccaagttcag
aagctcatgcgggagagactgatggactggaaggacttcctgttggtgaagagcaggagg
aacatcaccatggtgtcctacctggaggacttcccaggcttggtgcatttcatctatgtg
gaccgaacaactgggcagatggtggctccttcccttagcagcagtgaaaagacttcatcg
gaattgggcaaggggcccctggccaccttcgtcaaagccaaggtctgggctctgatccgg
ctggcgcgccaatacctgcagaagggctacaccacactgctgttccacgagggggacttc
tgcttctcctacttcctgtggttcgagaacgatatgggctacaagctgcagatgatcgag
gtgcctgtcctctctgatgactcggtccccattggtgtgctgggcggtgactactacagg
aagctcctgcgctactacagcaagagtcaccctgctgaggctgtcaggtgctatgagcta
ctgaccctgcacctgtcagtcatccccaccagcctgctggtgcagcaggccagccagctg
gcccggcgcctgggagaggcctcccgggtccccctgccctag
DBGET
integrated database retrieval system
