Sciurus carolinensis (gray squirrel): 124984651
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Entry
124984651 CDS
T08117
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain containing-NOGO receptor-interacting protein 4
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124984651
Membrane trafficking [BR:
ncar04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
124984651
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GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
LRR_1
Ig_3
ig
LRR_14
V-set
Ig_2
LRR_Zer-1
LRRNT
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
124984651
NCBI-ProteinID:
XP_047408482
LinkDB
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Position
1:97785677..97790738
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AA seq
593 aa
AA seq
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MDATTAPKQIWPPWCPLLFLLLLPGGSRGSCPAMCDCASQPRAVLCAHRRLEAVPGGLPL
DTELLDLSGNRLWGLQRGMLSRLGLLQELDLSHNQLSTLEPGAFLGLQSLLTLRLQGNRL
RIVGPGVFSGLSALTLLDLRLNQIVLFLDGAFGELGSLQQLEVGDNHLVFVAPGAFAGLA
KLSSLTLERCNLSMVPGLALARLPALVVLRLRELDIERLPAGALRGLGQLKELEIHHWPS
LEALDPGSLIGLNLSSLAITRCNLSSVPFQALHHLSFLRVLDLSQNPISAIPARRLTPLV
RLQELRLSGACLTSIEAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPL
TCDCRLLWLLRLRSRLDFGTSPPACAGPQHVQGKSLREFSDILPPGHFTCKPALIQKSGP
RWVIAEEGGHAVFSCSGDGDPAPTVSWMRPQGAWLGRAGRVRVLEDGTLEIRSVQLQDRG
AYVCVVSNVAGNDSLRTWLEVIQVEPPNGTLTDPNITMPGIPGPFFLDSRGVAMVLVVGF
LPFLTSVTLCFGLIALWSKGKGRVKHHMTFDFVAPRSSGDKNSGGNRVTAKLF
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaccacagctccaaagcaaatctggcccccatggtgccccctccttttcctg
cttctcctgcctggaggtagcagaggtagctgccctgccatgtgtgactgtgcctcccag
ccccgagcggtgctctgtgcccataggcgactagaggctgtccctgggggactcccgttg
gacactgagctcctggacctaagtgggaatcgcctgtgggggctccagcggggcatgctt
tcccgactgggcttgctccaagaactggacctcagccacaaccagctctctacccttgag
cctggggccttccttggcctacaaagcctactcaccctgaggttgcagggcaatcggctc
cgaattgtggggcctggggtcttctcagggctgtctgccctcacactgctagaccttcgt
ctcaaccagattgttctcttccttgatggagcttttggtgaattaggcagcctccagcag
ttggaggttggggacaatcacctggtgtttgtggctccaggggcctttgcaggactggcc
aagctgagctccctcaccctggagcgctgcaacctcagcatggtgcctggcctagccctt
gcccggctcccagcactagtggtccttagacttcgggaactggatattgagaggctgccg
gctggggcactccggggactgggacagctcaaggagttggagatccatcactggccatct
ctggaggctctggaccctgggagtctgattgggctcaatctgagcagcctggctatcact
cgctgcaacctgagctctgtgcccttccaagctctgcaccacctgagcttcctcagggtc
ctggatctatctcagaaccctatctctgccattccagccaggaggctcacccccctggta
cggctccaggagctgcgattatcaggggcctgcctcacctccattgaggcccacgctttc
cacggtttgacagccttccacctgctggatgtggcagataatgctcttcagaccctggag
gaaacagctttcccgtctccagacaaactggtcactctgaggctgtctggcaaccccctc
acctgtgactgtcgccttctctggctgcttaggcttcgtagccgcctggactttggcaca
tccccccctgcctgtgctggcccccagcatgtccaagggaagagcctgagggagttttca
gacatcctgcctccagggcattttacttgcaaaccagccctgatccagaagtctgggcct
cggtgggtcattgcagaggagggaggacatgccgttttttcctgctctggagatggagac
ccagcgcccactgtctcctggatgaggcctcaaggggcttggctgggaagggcagggaga
gtaagggtcctagaggatgggacactggagatccgctcagtacagctacaggacagaggg
gcctatgtctgtgtggtcagcaatgtagctgggaatgactccctgaggacctggctagaa
gtaattcaagttgaaccaccaaatggcactctcactgatcctaacatcaccatgccaggg
atcccagggcctttctttctggacagtaggggtgtggctatggtgctagtggttggtttc
ctccccttcctcacctcagtgaccctctgctttggcctgattgccctctggagcaagggc
aagggcagggtcaaacaccacatgacctttgactttgtggcacctcggtcctctggggat
aagaactctgggggtaatcgggtcactgccaagctcttctga
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