Sciurus carolinensis (gray squirrel): 124984656
Help
Entry
124984656 CDS
T08117
Name
(RefSeq) RNA-binding protein 26 isoform X1
KO
K13192
RNA-binding protein 26
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncar01009
]
124984656
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124984656
03041 Spliceosome [BR:
ncar03041
]
124984656
Protein phosphatases and associated proteins [BR:
ncar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124984656
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
124984656
Spliceosome [BR:
ncar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124984656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PWI
Nup35_RRM_2
RRM_Nup35
zf-CCCH
zf_CCCH_4
COG5_N
Motif
Other DBs
NCBI-GeneID:
124984656
NCBI-ProteinID:
XP_047408489
LinkDB
All DBs
Position
5:complement(73125007..73205010)
Genome browser
AA seq
1022 aa
AA seq
DB search
MVSKMIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCIDQLDVF
LQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFQHQEKDIKKEEITKEEEREKKF
SRRLNHSPPQSSSRYRENRSRDERKKDDRSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYS
RSRSRSWSKERLRDRDRDRSRTRSRSRTRSRERDLVKPKYDLDRTDPLENNYTPVSSVPN
ISSGHYPVPTLSSTITVIAPTHHGNNTTESWSEFHEDQVDHNSFVRPPMPKKRCRDYDEK
GFCMRGDMCPFDHGSDPVVVEDVNLPGMLPFPAQPPVVEGPPPPGLPPPPPILTPPPVNL
RPPVPPPGPLPPSLPPVTDDISYSLVLTGPPPPLPPLQPSGMDAPPNSATSSVPTVVTTG
IHHQPPPAPPSLFTAVFVLPDTYDTDGYNPEAPSITNTSRPMYRHRVHAQRPNLIGLTSG
DMDLPPREKPPNKSSMRIVVDSESRKRTIGSGEPGVPTKKTWFDKPNFNRTNSPGFQKKV
QFGNENTKLELRKVPPELNNISKLNEHFSRFGTLVNLQVAYNGDPEGALIQFATYEEAKK
AISSTEAVLNNRFIKVYWHREGSTQQLQTTSPKVMQPLVQQPILPVVKQSVKERLGPVPS
TTVEPAEAQSASSDLPQNVTKLSVKDRLGFVSKPSVSATEKVLSTSTGLTKTVYNPAALK
AAQKALLVSTPAVDNNEAQKKKQEALKLQQDVRKRKQEILEKHIETQKMLISKLEKNKAM
KSEDKAEIMKTLEVLTKNITKLKDEVKATSPGRCLPKSIKTKTQMQKELLDTELDLYKKM
QAGEEVTELRRKYTELQLEAAKRGILSSGRGRGIHSRGRGATHGRGRGRGRGRGVPGHAV
VDHRPRALEISAFTESDREDLLPHFAQYGEIEDCQIDDSSLHAVITFKTRAEAEAAAVHG
ARFKGQDLKLAWNKPITNISAVETEDVEPDEEEFQEESLVDDSLLQDDDEEEEDNESRSW
RR
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggtttctaaaatgatcattgaaaacttcgaggcactcaagtcctggctcagcaagact
ctcgagcccatctgtgatgcagatccatcagccctagcaaaatatgttctggctttggta
aagaaagacaaaagtgaaaaagaattaaaggcattatgtattgatcaactggatgtattt
cttcagaaagagacacagatatttgtggaaaaactttttgatgctgtgaatacaaaaagt
tatctacctcctccagagcagccatcatcaggaagcctgaaggtagagttttttcagcac
caagaaaaagatataaaaaaagaagagattacaaaagaagaagagcgagagaagaagttt
tctagaaggctaaatcacagtcctccccagtcaagctcccggtatagagaaaatagaagt
cgtgatgagaggaaaaaagatgatcgctctcgcaaaagagattatgatcgaaaccctcct
cgaagagattcatacagagaccggtacaatagaagacgagggcgaagtcgcagctacagc
aggagtcgaagtcggagttggagtaaagagaggcttcgtgacagggatagagatagaagc
aggactagaagcagaagcagaacacgaagcagggaaagggatctagtaaagcctaaatac
gacctggatagaacagatccattagaaaataattacactccagtgtcttcggtacccaat
atctcttctggccactatcctgtacctactttgagcagtaccattaccgtaattgcacct
actcatcatggtaataacactactgaaagttggtctgaatttcatgaagaccaggtggac
cataactcttttgtaagaccaccaatgccaaagaaaaggtgtagagactatgatgaaaag
ggtttttgtatgagaggagacatgtgcccttttgatcatggaagtgacccagtagttgta
gaagatgtgaatcttcctggcatgttgcctttcccagcacagcctcctgttgttgaagga
ccacctcctcctggactccccccacctccaccaattcttacacccccacctgtgaatctc
agacccccagtgccacctccaggtccattaccacccagtctcccacctgtaacagatgat
atttcttattctttggttttgacaggaccaccacctccacttcctcctttgcagccatct
ggcatggatgctcccccaaactctgcaaccagttctgttcctactgtagtaacaactggc
attcatcaccaacctcctcctgctccaccctctctttttactgcagtttttgtattacca
gatacatatgacacagatggctacaatcctgaagccccaagcataacaaacacttccaga
cctatgtatagacacagagtgcatgcacaaaggcctaacttgataggactaacatcaggg
gatatggatttgccaccaagagaaaagcctcctaataaaagcagtatgaggatagtagtg
gattcagaatcaagaaaaagaaccataggttctggggagcctggagttcctacaaagaag
acttggtttgataagccaaattttaataggacaaacagcccaggcttccagaagaaggtt
cagtttggaaatgaaaataccaaacttgagcttagaaaagttcctccagaattaaataat
atcagcaaacttaatgaacattttagtcgatttggaacattggttaacttacaggttgca
tataatggtgatcctgagggtgcccttatccaatttgcaacatatgaagaagcaaagaaa
gcaatatcaagtaccgaagcagtattaaacaatcgctttattaaggtttattggcacaga
gaaggaagcacccaacagttacaaactacttccccaaaggtaatgcaacctttagtacag
cagcccattttgcctgttgtgaagcagtcagttaaagagcgactgggcccagtaccttca
actactgttgaaccagcagaagcccagagtgctagttcagaccttcctcagaatgtaact
aagttatctgtgaaggacaggttgggttttgtatcaaagccatctgtttcagcaactgaa
aaggtattgtctacatctactggcctaacaaaaacggtgtataatccagctgctttgaag
gctgcacaaaaagccttacttgtttctacccctgcagttgataataatgaagcacagaaa
aaaaaacaggaggcactgaaacttcagcaggatgtaaggaaaaggaaacaagaaatttta
gaaaagcacattgaaacacagaagatgttaatttcaaagctagagaaaaataaagcaatg
aagtctgaagataaagcagaaataatgaagactttagaggttttaacaaaaaatattacc
aagttgaaagatgaggtcaaagctacttctcctggacgctgtcttccaaaaagtataaaa
acaaagactcagatgcagaaggaattactggacacagaattggatttatataagaagatg
caggctggagaagaagtcactgaacttaggagaaagtatacagaattacagctggaagct
gcaaaacgagggattctttcatctggtcggggtagaggaattcattcaagaggccgtggt
gccactcatggccgaggcaggggtcgaggtcgtgggcgaggtgtgcctggtcatgctgtg
gtggatcatcgtcccagagcgttggagatttcagcatttacagagagtgatagagaagat
cttcttcctcattttgcgcaatatggtgaaattgaagattgtcagattgatgactcttca
cttcatgcagtaattacattcaagacaagagcagaagcagaagcagctgcagttcatgga
gctcgtttcaaagggcaggatctaaaactggcatggaataaaccaataactaatatttca
gctgtggaaacagaagatgttgaacctgatgaagaggaatttcaggaagagtctttggtg
gatgactcattacttcaagatgatgatgaagaagaagaggacaatgaatctcgttcttgg
agaagatga
DBGET
integrated database retrieval system
