KEGG   Sciurus carolinensis (gray squirrel): 124984670
Entry
124984670         CDS       T08117                                 
Name
(RefSeq) cilia- and flagella-associated protein 57-like
  KO
K24729  cilia- and flagella-associated protein 57
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ncar03037]
    124984670
Cilium and associated proteins [BR:ncar03037]
 Motile cilia and associated proteins
  Other motile cilia associated proteins
   124984670
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML WD40_CDC20-Fz WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_TEP1_2nd Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_HPS5 ATG16 Beta-prop_WDR35_TULP_N CC4_CEP85 YabA Beta-prop_DCAF12 Beta-prop_WDR75_2nd VPS11_N WDR54 Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 124984670
NCBI-ProteinID: XP_047408537
LinkDB
Position
1:complement(176618119..176679358)
AA seq 1248 aa
MSAVVAQSLHVFGLRAHVANNIFFFDEQIIIYPSGNHCVKYNVDQKWQKFIPGSDKSQGM
LALSISPNRRYLAISETVQEKPVITIYELSSIPCRKRKVLNTFDFAVQKFISMAFSPDSK
YLLTQTSPPESNLVYWLWEKQKVMAIIRADTQNNPIYQVSINPQDNTQVCVTGNGMFKLL
RFAEGTLKQTNFQRGETQNYLAHAWVADDRIIVGTDTGRLFLFESGDQRWETNIMVKEPT
DNSRSLEVIQESESLIEFPPASSPVPSYEQIVTASNQNELVMPRVFAIAAYSKGFACSAG
PGRVLLFEKIEERDSYRESREIRIPVDPQSNDPSQSDKQDILCMCFSPSEETLVASTSKN
QIYSITMSLTEISKGEPAHFEYLMYPLHSASITGLSTCIRKPLIATCSLDRSVRIWNYES
NTLELFKEYQEEAYTVSLHPSGHYIVVGFADKLRLMNLLIDDIRSFKEYSVRGCRECSFS
NGGHLFAAVNGNVIHVFTTTSLENITNLKGHTGKIRSIVWNPDDSKLISGGTDGAVYEWN
LSSGKRETECVLKSCSYNCVTISPDSRIIFAVGSDQTLKEIADSSVLREMSAFDVIYTAI
VISHSGRMMFVGTSVGTIRAMKYPLPLQKEFNEYQAHAGPITKMSLTFDDQYLLTAAEDG
CLFTWKVFDKDGRGIKREREVGFAEEVLVTKTDMEEKAQIMLELKTRVEELKMENEYQLR
LKDMNYNEKIKELTDKFIQEMESLKTKNQVLRTEKEKQDISHRERIEDLIDRQNRELQDL
ESCNNQKLLLEYEKYQELQLKSQRMQEEYEKQLRDNDETKSQALEELTEFYEAKLQEKTT
LLEEAQEDVRQQLREFEETKKQIEEDEDREIQDIKTKYEKKLRDEKESNLRLKGETGIMR
KKFSSLQKEIEERTNDIETLKGEQVKLQGVIKSLEKDIQSLKREIQERDETIQDKEKRIY
DLKKKNQELEKFKFVLDYKIKELKKQIEPRENEIKVMKEQIQEMEAELERFHKQNTQLEL
NITELWQKLKATDQEMRKERQKERDLEAVVKWFKTDLHNCVAYIQEPPLLKEKVRGLFEK
YVQRADKVEIAGLNTDLQQEYARQREHLERNLATIKKKVLKESELHRTDYVRIMQENVSL
IKEINELRRELKFTRSQVYDLECALKLSQKIRPQEVKETVPSKDLPSIRPTMRLKEQEET
ERIIEMQRLEIRRLRDQIQEQEQVPGFHTVAGIRLPSIPDSDSELTNQ
NT seq 3747 nt   +upstreamnt  +downstreamnt
atgtcggccgtcgtagctcagtcgctgcatgtttttggccttcgagcccatgtggccaac
aatatctttttcttcgatgaacagattattatatatccttcaggaaaccattgtgtgaag
tacaatgtggatcagaaatggcaaaaattcattccaggctcagacaagagtcagggcatg
ttggccttgtccatcagtcccaatcggcggtacctcgctatctcggagactgtgcaggag
aaacctgtcatcaccatttatgagctgtcgtccatcccgtgccggaagcgcaaagtcctt
aatacttttgactttgcagttcagaaatttatcagcatggccttttctccagactccaaa
tatctattgactcagacatcacctccagaatcaaatcttgtctattggctgtgggaaaag
cagaaagtaatggccattattagagccgacactcagaacaaccctatctaccaggtgagc
atcaatccccaggacaacactcaggtttgtgtcactggaaatgggatgtttaagctactg
cgttttgctgagggaaccctaaagcaaaccaattttcagagaggagaaacccaaaactat
ctagcccatgcctgggtggctgatgacaggattattgttggcactgatacaggcaggctt
tttctcttcgaatctggagaccaacgctgggaaacgaacataatggtcaaggagcccacc
gataactcacggagcctggaggttatccaggagtcagagagcctgattgaatttccacct
gccagttccccagtcccttcctatgaacagatcgtgacggccagtaaccaaaacgaactg
gtcatgccccgggtgttcgccattgctgcctattcaaaggggtttgcctgctctgctgga
cctggaagagttctgctatttgaaaagatagaagagagggactcttaccgagagagcagg
gaaatccggattcctgtggacccacagagcaatgacccaagtcagtctgacaaacaggac
attctgtgtatgtgcttcagcccttcagaggaaacccttgttgccagcaccagtaagaac
caaatctacagcatcaccatgtccctgactgagatcagcaaaggggagccggctcacttc
gagtacctaatgtacccattacactcagcatccatcactggtctatctacctgcatccgc
aaacccctcattgctacctgttcactggatcgatctgttcgcatctggaattatgaatca
aacactctggaactatttaaggaataccaagaagaggcatatacagtcagccttcaccca
tctggacactacattgtagtggggtttgctgacaaactgcgccttatgaatctactcatt
gatgatatacgttctttcaaagagtattccgtcagaggatgcagagagtgttccttcagc
aatggaggccacctgtttgctgcagtcaatggaaatgtgattcacgtttttaccaccacg
agcctagagaacatcacaaacctgaaaggacacaccgggaagattcgctcaattgtctgg
aacccagacgacagcaaactgatttctggtggcacagacggtgctgtatatgaatggaat
ctgtcttcaggaaagagagagacagagtgtgtgctcaagtcctgcagctacaactgtgtt
actatctcccctgattccagaattatttttgctgtgggatcggaccagaccctcaaggag
attgcagattcttcagtcctgcgagagatgtcagcatttgatgtcatctacacggcaatt
gtcatttcacattccgggcgcatgatgtttgtgggcacctcagtgggaaccatccgtgcc
atgaagtaccctctgcctctgcagaaagaattcaatgagtatcaggctcatgctggtcct
atcaccaagatgtcactcacctttgatgatcagtacctactgactgctgctgaggatggc
tgcctgttcacctggaaggttttcgataaggatggccggggaatcaagcgagaaagggag
gtgggctttgctgaagaggtgctcgtgactaaaacagacatggaagagaaggctcagatt
atgttggagctgaagactcgtgtggaagaactgaaaatggagaatgagtatcaacttcga
ctaaaggatatgaactacaatgagaagattaaggagctaacagacaagttcatccaggaa
atggagtccttgaaaaccaaaaaccaggttttacgaacagaaaaagaaaagcaggatata
agtcaccgtgagcgcatagaagacctgatagacagacagaaccgggaactgcaagacctg
gaaagttgcaacaaccaaaagttgcttctagaatatgagaaataccaggagctgcaactc
aagtcccaaaggatgcaggaagagtatgaaaaacagctccgggataatgatgagaccaag
agccaggccctggaggagctgactgaattttatgaggccaagctgcaagagaaaaccacc
cttttggaagaggcccaggaggatgtcaggcaacagctgagggaatttgaagagaccaag
aagcagattgaagaagatgaagaccgagaaatccaagatatcaaaaccaaatacgagaaa
aaacttcgggatgaaaaggaatccaacctgcggctcaagggggaaacaggcattatgagg
aagaagttcagcagcctgcagaaggaaatcgaagagcgaaccaacgacattgagaccctg
aagggagagcaggtgaagctgcagggagttatcaagtccctggagaaagacatccaaagc
ctcaaacgagagatccaggagagagatgagaccattcaagataaggagaaacgaatttat
gatctaaaaaagaagaatcaagaactagagaaattcaaatttgtgcttgattacaaaata
aaagagctgaagaagcaaatagaacctcgagagaatgagatcaaggtgatgaaggaacag
attcaggagatggaagctgagctggagcgtttccataaacagaacacacaactagagctg
aacatcacagagctgtggcagaaattaaaagccacggatcaggagatgcgcaaagagaga
cagaaggagcgggacttggaagcggtggtcaaatggtttaagacagaccttcataactgt
gtggcgtatatccaggagcccccgctgctgaaggagaaggtccgaggtctgtttgagaag
tacgtgcagcgggcagacaaggtagagatcgcagggctgaacacagacctgcagcaggag
tacgcccgccagcgggagcatctggagaggaacctggccacgatcaagaagaaggtgctc
aaggagagcgagctgcaccgcaccgactacgtccgcatcatgcaggaaaacgtttcctta
atcaaggaaattaatgagctccgtagggaactgaagttcacccggtctcaagtttatgac
cttgaatgtgctctgaaactgtcccagaaaatccgaccacaagaagttaaagagacagtc
cccagcaaggacttgcccagcatccgtcccaccatgaggctgaaggaacaagaagaaact
gagagaatcatcgaaatgcaacgcctagaaatccggcgtctcagagaccagattcaagag
caagagcaggtcccagggttccacaccgtcgctggaattcggcttccttccatccctgat
tcagattctgagttgacaaaccagtga

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