Sciurus carolinensis (gray squirrel): 124984691
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Entry
124984691 CDS
T08117
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124984691
03041 Spliceosome [BR:
ncar03041
]
124984691
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
124984691
Spliceosome [BR:
ncar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124984691
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Nup35_RRM_2
Calcipressin
Motif
Other DBs
NCBI-GeneID:
124984691
NCBI-ProteinID:
XP_047408588
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All DBs
Position
5:complement(165583586..165603228)
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AA seq
392 aa
AA seq
DB search
MMEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQ
HTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGD
LSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL
GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQ
TFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTK
NFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPPYGVYGQPWNQQGFGVDQSPSAAWMG
GFGAQPPQGQAPPPVIPPPNQAGYGMASYQTQ
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagacgacggacagccccggactctatacgtaggtaacctctccagagatgtg
acagaagtccttatacttcagttattcagtcagatcggaccctgtaaaagctgtaaaatg
ataacagagcaacccgatagcagaagggtcaactcttctgttggattttctgttttgcag
catacaagcaatgacccatattgctttgtggaattttatgaacacagagatgcagctgct
gcattagctgctatgaatgggagaaaaattttgggaaaggaggtcaaagtaaactgggca
acaacaccaagtagccagaaaaaagatacttccaatcacttccatgtgtttgttggggat
ttgagtccagaaattacaacagaagatatcaaatcagcatttgccccctttggtaaaata
tcggatgcccgggtagttaaagacatggcaactggaaaatccaaaggctatggttttgta
tctttttataacaaactggatgcagaaaatgcaattgttcatatgggaggtcagtggttg
ggtggccgacaaatcagaaccaattgggccacacgcaaaccacctgcacctaaaagtaca
caagaaaacaacactaagcagttgagatttgaagatgtagtaaaccagtcaagtccaaaa
aattgtactgtgtactgtggaggaattgcttctgggttaacagatcagcttatgagacag
acattttcaccatttggacaaattatggaaataagagtttttccagagaagggctattca
tttgtcagattttcaactcatgaaagtgcagcccatgccattgtttcagtgaatggtact
acaattgaaggacatgtggttaaatgctattggggtaaagaatctcctgatatgactaaa
aacttccaacaggtcgattatagtcagtggggccagtggagccaagtatatggaaaccca
caacagtatggacagtatatggcaaatgggtggcaagtaccgccttatggagtatatgga
caaccatggaatcaacaaggatttggagtagatcaatcaccttctgctgcttggatgggt
ggatttggtgctcagcctccccaaggacaagctcctccccctgtaatacctcctcctaac
caagctggatatggtatggcaagttaccaaacacagtga
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