KEGG   Sciurus carolinensis (gray squirrel): 124984746
Entry
124984746         CDS       T08117                                 
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform isoform X1
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03015  mRNA surveillance pathway
ncar04071  Sphingolipid signaling pathway
ncar04151  PI3K-Akt signaling pathway
ncar04152  AMPK signaling pathway
ncar04261  Adrenergic signaling in cardiomyocytes
ncar04382  Cornified envelope formation
ncar04390  Hippo signaling pathway
ncar04530  Tight junction
ncar04660  T cell receptor signaling pathway
ncar04728  Dopaminergic synapse
ncar05142  Chagas disease
ncar05160  Hepatitis C
ncar05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    124984746
 09130 Environmental Information Processing
  09132 Signal transduction
   04390 Hippo signaling pathway
    124984746
   04071 Sphingolipid signaling pathway
    124984746
   04151 PI3K-Akt signaling pathway
    124984746
   04152 AMPK signaling pathway
    124984746
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    124984746
 09150 Organismal Systems
  09151 Immune system
   04660 T cell receptor signaling pathway
    124984746
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    124984746
  09156 Nervous system
   04728 Dopaminergic synapse
    124984746
  09158 Development and regeneration
   04382 Cornified envelope formation
    124984746
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    124984746
   05165 Human papillomavirus infection
    124984746
  09174 Infectious disease: parasitic
   05142 Chagas disease
    124984746
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ncar01009]
    124984746
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncar03019]
    124984746
   03036 Chromosome and associated proteins [BR:ncar03036]
    124984746
Protein phosphatases and associated proteins [BR:ncar01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     124984746
Messenger RNA biogenesis [BR:ncar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     124984746
Chromosome and associated proteins [BR:ncar03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     124984746
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EML Beta-prop_EML_2 Beta-prop_IFT140_1st Y_phosphatase2 WD40_MABP1-WDR62_1st DUF6816
Other DBs
NCBI-GeneID: 124984746
NCBI-ProteinID: XP_047408704
LinkDB
Position
5:175267000..175305141
AA seq 452 aa
MAGAGGGGCPAGNDFQWCFSQVKGAVDEDVAEADIISTVEFNYSGDLLATGDKGGRVVIF
QREQENKIRPHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTN
DKTIKLWKISERDKRAEGYNLKDEDGRLRDPFRITALRVPILKPMDLMVEASPRRIFANA
HTYHINSISVNSDHETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFH
PHQCNVLVYSSSKGTIRLCDMRSSALCDRHSKFFEEPEDPSSRSFFSEIISSISDVKFSH
SGRYMMTRDYLSVKVWDLNMESRPVETHQVHEYLRSKLCSLYENDCIFDKFECCWNGSDS
AVMTGSYNNFFRMFDRSTRRDVTLEASRESSKPRASLKPRKVCAGGKRKKDEISVDSLDF
NKKILHTAWHPVDNVIAVAATNNLYIFQDKAN
NT seq 1359 nt   +upstreamnt  +downstreamnt
atggcgggagccggaggcggcggctgccccgcgggcaacgactttcagtggtgcttctcg
caggtgaagggcgccgtcgacgaggacgtggcggaagccgacatcatttcaaccgttgaa
tttaattactctggagatcttcttgcaacaggagacaagggcggcagagttgttattttt
cagcgggaacaagagaataaaattcgccctcattccaggggagaatataatgtttacagt
acctttcaaagtcatgaaccagagtttgactatttgaaaagtctagaaattgaggaaaag
attaataaaattaggtggctgccacaacagaatgctgctcattttctactgtctacaaat
gataaaactattaaattatggaaaataagtgaacgggataaaagagcagaaggttataac
ttgaaagatgaagacggacggcttcgagacccatttagaatcacagcactgcgggttcca
atattgaagcccatggacctcatggtagaagcaagcccacgacgaatttttgcaaatgct
catacgtatcatataaattccatttcagtaaatagtgatcatgaaacgtatctttctgca
gatgacctgagaattaacctgtggcatttagagatcacagatagaagttttaacatcgtg
gacatcaaacctgccaacatggaggagctgacggaagtcatcaccgccgccgagttccac
ccacaccagtgcaacgtgctcgtctacagcagcagcaaggggaccatccggctgtgtgac
atgcgctcctccgccctgtgcgaccggcactctaagttttttgaagagcctgaagatccc
agtagcaggtccttcttctcagaaataatttcatccatatccgatgtcaaattcagtcat
agtggtcggtacatgatgaccagagactacctgtcagtgaaggtgtgggacctcaacatg
gagagcaggccagtggagacccaccaggtgcatgagtacctgcggagcaagctctgctcc
ctctatgagaacgactgcatcttcgacaagtttgagtgctgctggaatggttctgacagt
gctgtcatgacgggctcctacaacaacttcttcaggatgttcgatagaagcactcggagg
gacgtcacactggaagcctcgagagagagcagcaaaccccgagccagcttgaagccccgg
aaggtgtgtgcaggcgggaagaggaagaaggacgagatcagtgtggacagcctggacttc
aacaagaagatcctccacacagcctggcaccccgtggacaacgtcattgccgtggctgcc
accaacaacctgtacatattccaggacaaagccaactga

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