Sciurus carolinensis (gray squirrel): 124984754
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Entry
124984754 CDS
T08117
Name
(RefSeq) uncharacterized protein LOC124984754 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
124984754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124984754
Membrane trafficking [BR:
ncar04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124984754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
124984754
NCBI-ProteinID:
XP_047408753
LinkDB
All DBs
Position
5:82359548..82682115
Genome browser
AA seq
1338 aa
AA seq
DB search
MLRKDLSSRVASDPNLAVTTSAEPHEHSRCEGQAGSRGDEGLELGLMDTGTDVYVGLKHT
APWPRAPCPNNMTTAQNGHGQGAVATCSTSDPKDPRMVTNPACQNGGCRSSPGSDTEASE
ARISPSKLVRLFSVSRKRMSANPERPRSMVLMGNSSTWNALASFRKMGSFKKLKSSVFQG
IQNREGSGTSKEDASEHDLGKAIPNGAAVGIDASRCSFLGQSDDLHRAGEGATSDGSDPE
DVDDAFQRSTHRSRSIRRAYGLGRINLLDSEKHHTPQNHVRPLSPIIQEPTLCEILVKDS
ENNSIIYRRSKSTDNLNFLKKSSFKRKSTSNLADLRVANEKQTPQRTLSSSSADSEKLGG
SERRTKRWKSPIRAKDFDRVLKLMSNVTDAAWKREGSKSGAPSPSEANLRLRLHSRLHDD
YSRRVSSSTEQDRRRGVSPGHSAAASCPTAPGFSSATSQEPRMDVDTAVFPLDAPNSQAS
ENDSPSASSPSSPLDSKGLSKTSNEPNAGSQFTFDPRQPPTPLRPTTPKPQSPQSPGTGG
TKCPNSLSALSLSSVESEERVEDSTQREPRPVSFQDSVQTACGDEDGNGSGGGSHPQLSL
GRTANPEEKKEEVVTGDPWRPGLSQDEERTEVPRITRRRWGSGKRSRPRPLSDYGQLISR
SLSIPEDSIAVDPQSEDCVDGPPLANMSSTDSADQNVSVGCPKEGRRRRPISVIGGVTFY
GNKQTEEIENLLTQPATRPPVPAHQVPPYKAVSARLRPFTFSQSTPIGLDRVGRRRQMRA
SNVSSDGGTESSALVDDNGSEEDFSYEELCQANPRYLQPGGEQLAINELISDGSVVCAEA
LWDHVTMDDQELGFKAGDVIQVLEASNKDWWWGRNEDKEAWFPASFVRLRVNQEELSENS
SSTPGEEQEEDASTSRHKHSENKHQMRTNVIQEIMNTERVYIKHLKDICEGYIRQCRKHT
GMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEY
CNNHPGACVELSNLMKQGKYRHFFEACRLLQQMIDIALDGFLLTPVQKICKYPLQLAELL
KYTTQEHSDYNNIKAAYEAMKNVACLINERKRKLESIDKIARWQVSIVGWEGLDILDRSS
ELIHSGELTKITKQGKSQQRTFFLFDHQLVSCKKDLLRRDMLYYKGRMDMDEMELVDVED
GRDKDWNLSVRNAFKLVSRTTDEVHLFCAKKQEDKAKWLQACADERRRVQEDQEMGMEIS
ENQKKLAMLNAQKAGHGKSKGYSGCPVAPPHQSLHPLHQRHITVPTSIPQQQVFALAEPK
RKPSLFWHTFHKLTPFRK
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaaaggatctgtcttcccgagtggccagtgacccaaacctggcagtgaccacc
tctgcagagccccatgaacacagcaggtgtgaaggccaggctggcagccgtggagatgaa
ggcctggagctggggcttatggacacagggacagatgtgtacgtgggtctgaagcacact
gcaccgtggccacgggcaccctgccccaataatatgacaacagctcagaatggccatggg
caaggtgctgtggccacctgttcaacttcagatccaaaggaccccagaatggtgactaac
ccagcatgtcagaatggaggctgtcggagcagccctggcagcgacactgaagcctctgaa
gccagaatcagcccttccaaactcgtgcgtctgttctctgtgagccggaaaaggatgagt
gccaaccctgagaggccccgttccatggtcctgatggggaattcctcaacatggaatgca
ctggcctccttccggaaaatgggatcttttaaaaaactgaagtcctctgtctttcaagga
attcagaaccgggagggctcaggtacctcaaaggaagatgcatcagagcacgacctggga
aaagccatccctaatggtgccgccgtgggaattgatgcgagcaggtgctcctttttggga
cagtcagatgacctccacagggcaggggaaggggccacgtctgacggctctgacccagag
gatgtggacgatgccttccagaggagtacccatcgctcccgcagcatccgcagagcctat
ggcctgggccgcatcaatctactggattctgagaaacatcacacccctcagaaccatgtt
aggcccctgtcccccatcattcaggagcccaccctgtgtgaaatcctagtgaaggactct
gaaaacaatagcatcatctacaggaggagcaagagcacagacaacttaaacttcctgaag
aaaagttccttcaagcgaaagtccacctccaatctcgcagacctccgagtggctaacgaa
aagcagacaccccagcggaccctaagcagttcgtctgcagactccgaaaaacttggtggg
tcagagagaaggacgaaacgctggaagagccccataagggccaaggactttgaccgagtc
ttaaaacttatgagcaatgtgaccgatgctgcctggaagagagagggttccaagagtggg
gccccatcccccagcgaggcaaacctcagactccggctccacagcagactgcatgatgac
tattcacgccgggtgtccagcagcaccgagcaggacaggaggcgaggcgtgtcgcctggg
cacagtgctgctgcgtcctgccccacagcccctggcttcagctccgccacttctcaggag
ccccgcatggacgtcgacacagctgtgttccctcttgatgccccaaactcccaggcatca
gaaaatgatagtccctctgccagcagcccctcaagtccacttgattcaaaagggttgagc
aaaacctctaatgagccaaatgcaggcagccagtttacatttgaccccaggcagcctccc
actcctctcagacccaccacgcccaagccccagagccctcagagcccagggacaggaggc
accaagtgtcccaatagtctcagcgcgctgtccctgagttcagtggaaagcgaagaaagg
gtagaagattccactcagagggagccaaggcctgtgtccttccaggactcagtgcaaact
gcatgtggtgatgaagatggcaatggtagtggtggtggcagccatcctcagctgagcctt
ggtaggacagccaatcctgaggaaaagaaagaagaggttgtgactggtgatccctggagg
ccaggcttatcccaggatgaggagaggacagaggtgcccaggatcaccaggaggagatgg
ggctccgggaagcggtccagaccgcggccactgtctgactatggccagctgatcagccga
agtttgtccattcctgaagactccattgctgtggacccccagagcgaggactgtgtggac
gggccccccctggcaaacatgtcctccaccgattctgcagaccagaatgtttcagttggc
tgtcccaaagaaggtcggagaagacgccccatttctgtgataggaggggtcaccttctat
ggcaacaagcagacagaggaaatcgagaatcttctaacccaaccagcaaccaggccaccc
gtgcccgctcaccaggtgccgccatacaaggcagtgtccgccaggctcaggcccttcaca
ttttctcagagcacccccattggactggaccgcgtgggacgccggcggcagatgagagca
tccaatgtttcttcagatggaggtactgagtcctctgccttagtcgatgacaacggtagc
gaggaggactttagctatgaagaactctgccaggccaaccctcggtatctacaaccaggc
ggggaacaactggccattaatgagctgatcagcgatggcagcgtggtctgcgcagaagct
ctctgggaccatgtgactatggacgaccaggaactgggcttcaaggctggggatgtcatc
caggtcctggaagcctctaacaaagactggtggtggggtcggaatgaggataaggaggcc
tggttccccgcaagctttgtcagacttcgagtcaatcaggaagagctgtcagaaaattct
agcagcacacctggcgaggagcaggaggaggatgccagcacaagccgtcataagcactct
gagaacaagcaccagatgcggacaaatgtcatccaggagatcatgaacactgagcgggtg
tacatcaagcacctcaaggacatctgtgagggctatattcgacagtgtcgcaagcacacg
ggaatgttcactgttgcacagctagccactatttttggaaacattgaagacatttacaag
ttccaaagaaagttcctgaaagaccttgagaagcagtacaacaaagaggaacctcactta
agtgaaataggatcctgcttccttcagcatcaagagggctttgccatctattccgagtac
tgcaacaaccacccgggtgcctgtgtggagctctccaacctcatgaagcagggcaagtac
aggcacttcttcgaagcctgccgcctcctccagcagatgattgacatcgccctggatggg
ttcctcctcacgccagtgcagaagatttgcaaataccctctgcagttagcagagctgctc
aagtacaccacacaggagcacagcgattacaacaacataaaggcagcctatgaggccatg
aagaatgtggcctgtttgatcaatgagcgcaaacgcaagctggagagcattgacaagatt
gctcgctggcaggtgtccattgtaggctgggagggattggatattctagaccgaagctca
gaattgattcattcaggggaactgaccaaaatcacaaagcagggcaagagccagcagcgg
acattcttcctgtttgaccatcagctggtgtcctgcaagaaggacctgctgcgcagggac
atgctgtactacaagggccgcatggacatggatgagatggagcttgtggatgtggaggat
ggacgggacaaggactggaacctcagcgtgagaaacgcctttaagctggtcagtagaacc
acagacgaggttcatctgttctgtgccaaaaaacaagaagacaaggcaaagtggctgcag
gcctgtgcggacgagagacggcgggtgcaggaggatcaggagatgggaatggaaatttca
gaaaatcagaaaaaactcgctatgttaaatgctcaaaaggcaggacatggaaagtcaaaa
ggctacagcggatgccccgttgccccgccgcaccagagcctgcatccccttcaccagcgc
cacatcaccgtgcccaccagcatcccccagcaacaggtgttcgccctggcagaacccaag
aggaaaccttccctcttctggcacaccttccataaactcacccctttcaggaagtga
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