Sciurus carolinensis (gray squirrel): 124984841 Help Entry 124984841         CDS       T08117                                  Name (RefSeq) collagen alpha-2(IV) chain   KO K06237   collagen type IV alpha Organism ncar  Sciurus carolinensis (gray squirrel) Pathway ncar04151   PI3K-Akt signaling pathway ncar04382   Cornified envelope formation ncar04510   Focal adhesion ncar04512   ECM-receptor interaction ncar04518   Integrin signaling ncar04820   Cytoskeleton in muscle cells ncar04926   Relaxin signaling pathway ncar04933   AGE-RAGE signaling pathway in diabetic complications ncar04974   Protein digestion and absorption ncar05146   Amoebiasis ncar05165   Human papillomavirus infection ncar05200   Pathways in cancer ncar05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:ncar00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     124984841   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     124984841    04518 Integrin signaling     124984841  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     124984841   09142 Cell motility    04820 Cytoskeleton in muscle cells     124984841  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     124984841   09154 Digestive system    04974 Protein digestion and absorption     124984841   09158 Development and regeneration    04382 Cornified envelope formation     124984841  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     124984841   09162 Cancer: specific types    05222 Small cell lung cancer     124984841   09172 Infectious disease: viral    05165 Human papillomavirus infection     124984841   09174 Infectious disease: parasitic    05146 Amoebiasis     124984841   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     124984841  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ncar04147]     124984841    00536 Glycosaminoglycan binding proteins [BR:ncar00536]     124984841 Exosome [BR:ncar04147]  Exosomal proteins   Exosomal proteins of other cancer cells    124984841 Glycosaminoglycan binding proteins [BR:ncar00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    124984841 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  124984841 NCBI-ProteinID:  XP_047408866 LinkDB All DBs Position 5:complement(2626452..2778111) Genome browser AA seq 1712 aa AA seqDB search MGQERCAAAGPALRRWQLLGALAVGFLAQSVLAGVKKFDVPCGGRDCSGGCQCYPEKGGR GQPGPVGPQGYTGPPGLQGFPGLQGRKGDKGERGAPGIVGPKGDVGARGVSGFPGADGIP GHPGQGGPRGRPGYDGCNGTRGDAGPQGPSGSAGFPGSPGPQGPKGQKGEPYALSKEDRD KYRGEPGEPGLVGFQGPPGRPGPIGPMGPVGAPGRPGPPGPPGPKGQPGNRGLGFYGEKG EKGDIGLPGPNGIPSDTTHPIVGPTRTTIHLDQYKGEKGSRGEPGIKGVSLKGEEGIVGF SGPRGPPGFDGEKGSPGQKGSRGLDGYQGPDGPRGPKGEPGDQGPPGPPAYLPHPSLAKG ARGDPGFPGTHGEPGSRGEPGDPGPAGPPGLSIGDEDEKRGLPGEMGPKGFQGEPGIPAF YPGPPGADGRPGLPGARGPAGPPGPDGFLFGLKGAQGPVGFPGPSGFPGSRGTKGGKGDA GDCKCAEGDQFIGGLPGLPGPKGFPGINGEPGRKGDQGDPGQHGIPGFPGFKGVPGIAGV PGPKGIKGDSRTITTKGERGQPGVPGVHGMKGDDGVPGRDGLDGFPGLPGPPGDGIRGPP GDAGYSGIPGTKGIPGEPGPPGLGLPGQKGERGFPGDAGLPGPPGFPGPPGPPGTPGQPD CDTDVKRPPGGDRQEAVQPGCVGGLKGSPGRPGPPGPPGTKGLRGIPGFSGTDGAPGLKG FPGDPGREGFPGPPGFMGPRGSKGAVGLPGPDGLPGPVGLPGPAGPPGDRGLPGEVLGAQ PGPRGDAGLPGHPGLKGLPGERGPPGFRGSQGMPGMPGLKGQLGFPGPSGQPGRPGPPGQ HGFPGAPGPAGPLGRPGAPGLGGLPGDRGDPGDTGVPGPVGMKGLSGDRGDAGFSGERGH PGSPGFKGMAGMPGVPGRKGERGSPGMDGFQGMLGLKGRPGLPGTKGEAGFFGIPGLKGL AGEPGVKGSRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGLKGIQGMPGVPGQA GIPGLPGRPGHIKGVKGDIGVPGLPGLPGFPGVAGPPGIAGFPGFTGSRGDKGAPGRAGL YGEIGPTGDFGDIGDTIDLPGSPGLKGERGIAGTPGLKGYFGEKGAEGEVGFPGITGMTG TQGSPGPKGQTGFPGLTGLQGPQGEPGRIGVPGHKGDSGWPGVPGLPGFPGIRGISGLHG LPGTKGFPGSPGADIHGEPGFPGPTGDRGDPGEANTLPGPTGVPGRKGEQGAPGERGPAG SPGLQGFPGITPPSNISGSPGDKGAPGIFGLEGYRGPPGPPGPAALPGSKGDDGSPGASG VPGGKGRVGDPGPQGRPGVFGLPGEKGPRGEPGFMGNTGATGAVGDRGPKGPKGDQGFPG APGSMGSPGIAGVPLTIAVQPGTMGPQGRRGPPGAQGEMGPQGPPGEPGFRGAPGKAGPQ GRGGVSAVPGFRGDQGPMGQQGPVGQEGEPGRPGVPGLPGLPGRSASIGYLLVKHSQADR EPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASR NDKSYWLSTTAPLPMMPVAEDEIKPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLW IGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIP EQSFQGAPSADTLKAGLIRTHISRCQVCMKNL NT seq 5139 nt NT seq  +upstreamnt  +downstreamnt atgggccaagagcggtgcgcggcggccggccctgccttgcggcggtggcagctgctgggg gccttggcagtggggttcctggcccagagcgtcttggcgggtgtgaagaagttcgatgtg ccctgtggagggagagactgcagtggcggctgccagtgctaccccgagaaaggaggacgc ggtcagccaggaccagtgggcccccagggctacaccgggcctcctgggctgcaaggcttc ccggggctacagggccgaaaaggtgacaagggcgaaagaggagctcctgggatagtagga cccaaaggggacgtgggagcaagaggcgtctctgggttccctggtgctgatggaattccg ggacatcctgggcaaggtgggccccgaggtcggcccggctacgacggctgcaacgggacc aggggcgacgcaggtccacaagggccctccggctccgcgggctttcctggctcccctggg ccccaaggacccaaaggacagaagggtgaaccttatgcactgtctaaagaggaccgcgac aaatacaggggtgaacctggagagcctggactggttggattccagggtcctcctggccgc cctgggcctatagggccaatgggtcctgttggagcccccggaagaccgggaccacctgga ccccctggaccaaaaggacagccaggcaacagaggactgggtttctatggagaaaagggt gaaaagggtgacataggactgccaggacccaatgggatcccgtcagacaccacgcatccc atcgtgggacccaccaggaccaccatccacctggatcagtataagggtgaaaaggggagc aggggggagccaggcataaagggcgtctccctgaagggcgaggagggcatcgtcggcttc tcaggaccacggggtcctcctggctttgatggagagaaaggatccccaggacagaaagga agccgaggcctggatggttaccaaggccctgatgggcccagaggacccaagggggaacca ggtgatcagggtcccccaggaccacctgcctacttgcctcatccttccctggctaaaggt gccagaggtgacccaggattcccaggaactcatggggagccaggaagccggggcgagcca ggagaccctgggcctgcaggtccccctggcctgtccattggagatgaagatgagaagaga ggcctgcccggggagatgggccccaaaggcttccaaggagaaccaggcatccctgcattc taccctggcccacctggagctgatggaaggccaggtctcccaggagcccgtgggcctgct ggaccgcctggaccagatggtttcttgtttggccttaaaggagcacaaggacccgtgggc ttccctgggccttctggtttcccaggaagtagaggaacgaaaggagggaaaggtgacgct ggggactgtaaatgtgcagaaggtgatcagttcatcgggggtcttccaggactgccagga cccaaaggtttcccgggtatcaatggggaaccagggaggaaaggggaccaaggagacccc ggacagcacggcatccctgggttcccagggttcaagggagtccctggcatagctggtgtt cctggacccaagggaattaaaggggattccagaacaataaccaccaaaggtgagagagga cagccaggtgtcccaggtgtgcacgggatgaaaggcgacgacggtgtcccagggcgtgac gggctcgatggcttccccggcttgccaggccctcctggggatggcatccgaggccctcca ggggacgcaggttactcaggcatacctggaaccaagggcattcccggagaaccgggcccc ccaggactgggcttaccaggccagaagggcgagcgtggattccctggagatgctgggctc cctggacctccaggcttccccggtcctccaggccccccgggaaccccaggacagccagat tgtgacacagatgttaaaaggccccctggcggtgacagacaggaggccgtccagccaggt tgtgtcggaggcctcaaaggatctcctggccggccaggccccccaggtcccccaggtacc aaaggcctcagagggataccaggcttctcaggaactgatggagcaccagggctcaagggc tttcctggagatccaggtcgggaagggtttccaggacccccagggttcatgggaccccga ggatccaaaggtgctgtgggcctccccggccctgatggactcccaggccctgttggcctg cccggaccagctggaccccctggagacaggggacttccaggagaagtcttgggggcccag cccgggccccggggagatgctggactacctggacacccggggctgaaaggtcttccagga gagagaggccccccaggattcagaggaagccaggggatgcctggaatgccagggttgaag ggtcagctgggctttccgggaccgtcaggccagccaggacgacccgggcctccaggacaa catggattcccaggagctcctggcccagcggggccattggggcgaccaggtgccccaggc ctcggaggtcttcctggggacaggggggaccctggtgacacaggcgtgcctggccctgtg ggcatgaaaggtctctccggggatagaggagatgctggcttctcaggcgagcgaggtcac ccaggaagccctggatttaaaggaatggctggaatgcctggtgtccctggacgaaaaggg gagagaggttctcctgggatggacggcttccaaggcatgctggggctcaaaggaagaccc gggctcccaggaaccaaaggagaggcgggattttttggcatacctggtctgaagggcctg gctggcgagccgggtgtgaaaggcagccgtggagaccctggtcccccgggaccacctccc atcatcctgccagggatgaaggacatcaaaggagagaaaggagacgaagggcccatgggc ctgaaggggtacctgggcttgaaaggaatccaagggatgccaggggtccccgggcaggca ggaatcccagggttacctgggaggcccggccacatcaaaggagtcaaaggagacatcgga gtgcctggcctgccaggtctgccagggttccctggagtggcgggcccccctgggattgca ggattcccggggttcacaggaagccggggtgacaagggtgctcctgggagagccggcctt tacggcgagattggccctactggggacttcggtgatattggggacactatagacttacca ggaagtccaggcctgaagggagaacgaggcatcgctggaactccaggactgaagggctac tttggagagaaaggagcagagggtgaagttggcttccctgggataacaggcatgactgga acccaaggctctcctggacccaaaggacaaacaggcttcccagggctaacagggctgcag ggaccacagggagagccagggcggatcggagtccccggccataaaggcgattctggctgg cccggcgtgccaggcttaccaggtttcccgggaatccgagggatcagtggattacacggc ctgccgggtaccaaaggcttcccagggtccccaggtgctgacatccatggagaaccagga ttcccaggacctactggggacagaggtgacccaggagaggccaacactcttcctggcccc acaggagtcccaggacggaaaggggagcagggagctccaggggaacggggcccagccggg agtccagggctgcagggcttccctggcatcacccccccttccaacatctctgggtctcct ggagacaaaggcgcaccaggcatatttggcctggaaggttaccgaggcccaccagggcca cctgggcctgcggcccttcctgggagcaaaggagatgacgggagtccaggagcttcagga gtccctgggggcaaaggacgggtcggggacccgggaccgcaaggccgacctggtgtgttt ggccttccaggagaaaaaggccccaggggcgagccaggattcatgggcaacactggagcc accggggctgtgggcgacagaggccccaaggggcccaaaggagaccaggggttccccggt gcccctggttctatgggatccccagggatcgcaggagtccccctgacgattgctgtccag cctgggacaatgggcccccaggggaggagaggtcctcctggggcacagggggagatgggg ccccaaggccctcctggagagccaggttttcgaggagctccagggaaggccgggccccag ggaagaggtggcgtgtctgctgtcccagggttccgaggggatcaagggccaatggggcaa cagggaccagttggccaagaaggggagccaggccgtccgggggtcccaggcctgcctggc ctgccgggccgcagcgccagcatcggctacctcctggtgaagcacagccaggcggaccgg gagcccatgtgccccgtgggcatgaacaagctctggagtggatacagcctgctgtacttt gaaggccaggagaaagcccacaaccaggatctggggctggcgggctcctgcctcgcacgc ttcagcaccatgcccttcctgtactgcaacccgggcgacgtctgctactacgccagccgc aatgacaagtcctactggctctccaccaccgccccgctgcccatgatgccggtggccgag gatgaaatcaagccctacatcagccgctgctccgtgtgcgaggccccagctgtcgccatc gcagtccacagtcaggacgtctctataccccactgcccggctggctggcgcagcttgtgg atcggctactccttcctcatgcacactgcggctggggacgaaggtggcggccagtctctg gtgtcaccgggcagctgtctggaggacttccgcgctacaccattcatcgagtgcaacggc ggccgtgggacctgccactactatgccaacaagtacagcttctggctgaccaccatcccc gagcagagcttccagggcgcgccctccgcggacacgctcaaggccggcctcatccgcacg cacatcagccgctgccaggtgtgcatgaagaacctgtga

DBGET integrated database retrieval system